Ghir_A08G001990.1_HAU-AD1_v1.0, Ghir_A08G001990.1_HAU-AD1_v1.0 (mRNA) Gossypium hirsutum

Transcript Overview


Name	Ghir_A08G001990.1
Unique Name	Ghir_A08G001990.1_HAU-AD1_v1.0
Type	mRNA
Organism	Gossypium hirsutum (Upland Cotton)
Sequence length	1328

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ghir_A08	chromosome	Ghir_A08:1803069..1805935 +	Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1	2018-10-30
InterProScan Analysis for HAU v1.0 Gossypium hirsutum proteins	2018-11-09
BLASTP of HAU v1.0 Gossypium hirsutum proteins vs NCBI nr	2018-11-20
BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt Swissprot	2018-12-03
BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt TrEMBL	2018-12-03
BLASTP of HAU v1.0 Gossypium hirsutum proteins vs arabidopsis TAIR10	2018-12-03

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ghhnR4073	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	Gossypium hirsutum
ghhnR4172	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	Gossypium hirsutum
ghghL1413	Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1	Gossypium hirsutum
bhghL2624	Gossypium barbadense (AD2) '3-79' genome HAU_v1	Gossypium barbadense
bhghL4864	Gossypium barbadense (AD2) '3-79' genome HAU_v1	Gossypium barbadense
gbghL1559	Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1	Gossypium barbadense
gbghL2846	Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1	Gossypium barbadense
ghrjR2186	Gossypium raimondii (D5) genome JGI_v2_a2.1	Gossypium raimondii
ghrbR3824	Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1	Gossypium raimondii
ghhjR3660	Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1	Gossypium hirsutum
ghhjR3752	Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1	Gossypium hirsutum
acghL1698	Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1	Gossypium arboreum
ghhzR3526	Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1	Gossypium hirsutum
ghhzR3616	Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1	Gossypium hirsutum
bzghL1510	Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1	Gossypium barbadense
bzghL2751	Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1	Gossypium barbadense
ghgkR2404	Gossypioides kirkii genome ISU_v3	Gossypioides kirkii
ghgtbR2766	Gossypium turneri (D10) genome NSF_v1_a2	Gossypium turneri
ghgrbR2627	Gossypium raimondii (D5) 'D5-4' genome NSF_v1	Gossypium raimondii
ghghzR3074	Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1	Gossypium hirsutum
ghghzR3147	Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1	Gossypium hirsutum
ghghtR3415	Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1	Gossypium hirsutum
ghghtR3499	Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1	Gossypium hirsutum
gaughL1160	Gossypium australe (G2) genome CRI_v1.1	Gossypium australe
adghL1551	Gossypium mustelinum (AD4) genome JGI_v1.1	Gossypium mustelinum
adghL2840	Gossypium mustelinum (AD4) genome JGI_v1.1	Gossypium mustelinum
ghhgsR2983	Gossypium barbadense (AD2) '3-79' genome HGS_v1.1	Gossypium barbadense
ghhgsR3048	Gossypium barbadense (AD2) '3-79' genome HGS_v1.1	Gossypium barbadense
ghtoR2911	Gossypium tomentosum (AD3) genome HGS_v1.1	Gossypium tomentosum
ghtoR2978	Gossypium tomentosum (AD3) genome HGS_v1.1	Gossypium tomentosum
gdghL1545	Gossypium darwinii (AD5) genome HGS_v1.1	Gossypium darwinii
gdghL2860	Gossypium darwinii (AD5) genome HGS_v1.1	Gossypium darwinii
fnghL1380	Gossypium longicalyx (F1) genome NSF_v1	Gossypium longicalyx
dtghL1002	Gossypium thurberi (D1-35) genome ISU_v1	Gossypium thurberi
ghhwR2862	Gossypium herbaceum (A1) 'Mutema' genome WHU_v1	Gossypium herbaceum
awghL1372	Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1	Gossypium arboreum
ghtwR3608	Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1	Gossypium hirsutum
ghtwR3689	Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1	Gossypium hirsutum
ghuhR2887	Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1	Gossypium hirsutum
ghuhR2962	Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1	Gossypium hirsutum
dttghL0301	Gossypium harknessii (D2-2) genome ISU_v1	Gossypium harknessii
dtoghL0275	Gossypium armourianum (D2-1) genome ISU_v1	Gossypium armourianum
dfighL0928	Gossypium aridum (D4) genome ISU_v1	Gossypium aridum
d3dghL0830	Gossypium davidsonii (D3d-8) genome CRI_v1	Gossypium davidsonii
ghgtiR2794	Gossypium thurberi (D1-5) genome CRI_v1	Gossypium thurberi
drighL0595	Gossypium raimondii (D5) 'D5-8' genome ISU_v1	Gossypium raimondii
dsighL115	Gossypium gossypioides (D6) genome ISU_v1	Gossypium gossypioides
dqighL1026	Gossypium lobatum (D7) genome ISU_v1	Gossypium lobatum
ghndmR3582	Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1	Gossypium hirsutum
ghndmR3671	Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1	Gossypium hirsutum
barghL1360	Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1	Gossypium hirsutum
barghL2507	Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1	Gossypium hirsutum
adbghL1351	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	Gossypium hirsutum
adbghL2478	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	Gossypium hirsutum
ghjmbR3616	Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1	Gossypium hirsutum
ghjmbR3699	Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1	Gossypium hirsutum
ghpscR3472	Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1	Gossypium hirsutum
ghpscR3556	Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1	Gossypium hirsutum
adyghL1458	Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1	Gossypium hirsutum
adyghL2672	Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1	Gossypium hirsutum
ghhpfR3406	Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1	Gossypium hirsutum
ghhpfR3481	Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1	Gossypium hirsutum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Ghir_A08G001990	Ghir_A08G001990_HAU-AD1_v1.0	Gossypium hirsutum	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Ghir_A08G001990.1.utr5p1	Ghir_A08G001990.1.utr5p1_HAU-AD1_v1.0	Gossypium hirsutum	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Ghir_A08G001990.1.exon1	Ghir_A08G001990.1.exon1_HAU-AD1_v1.0	Gossypium hirsutum	exon
Ghir_A08G001990.1.exon2	Ghir_A08G001990.1.exon2_HAU-AD1_v1.0	Gossypium hirsutum	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Ghir_A08G001990.1	cds.Ghir_A08G001990.1_HAU-AD1_v1.0	Gossypium hirsutum	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Ghir_A08G001990.1.utr3p1	Ghir_A08G001990.1.utr3p1_HAU-AD1_v1.0	Gossypium hirsutum	three_prime_UTR
Ghir_A08G001990.1.utr3p2	Ghir_A08G001990.1.utr3p2_HAU-AD1_v1.0	Gossypium hirsutum	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Ghir_A08G001990.1	Ghir_A08G001990.1_HAU-AD1_v1.0-protein	Gossypium hirsutum	polypeptide
Ghir_A08G001990.1_HAU-AD1_v1.0	Ghir_A08G001990.1_HAU-AD1_v1.0	Gossypium hirsutum	polypeptide

Homology

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1028938616|ref|XP_016712491.1| (PREDICTED: F-box protein CPR30-like [Gossypium hirsutum] >gi|1050560552|ref|XP_017645540.1| PREDICTED: F-box protein CPR30-like [Gossypium arboreum] >gi|1050560555|ref|XP_017645552.1| PREDICTED: F-box protein CPR30-like [Gossypium arboreum])

HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|823146268|ref|XP_012473023.1| (PREDICTED: F-box protein CPR30-like [Gossypium raimondii] >gi|823146270|ref|XP_012473024.1| PREDICTED: F-box protein CPR30-like [Gossypium raimondii] >gi|763754592|gb|KJB21923.1| hypothetical protein B456_004G021700 [Gossypium raimondii])

HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0
Identity = 345/369 (93.50%), Postives = 361/369 (97.83%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHE+ SDILCRLSVKDLLRFRSVSKPWC +ID+PYFIKLHLSHSLKT TNHSLILSHWED+FFSVDYDLFETTQRLNHPFGE+RKTLQILGSCNGLLALVDD D IFLWNPSTRKSQVLPFNEIGFSSPSS+YYGFGYDPISD+YKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELPDGCLDK+LRFHIKAMGGDICLTSTYRETN+ VVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVA+P+AFSKDGDEVLFFIGYKWFNWGR IDSFVWYDLGSQVVED VIRGIP+SFDV+LYVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEVTSDILCRLSVKDLLRFRSVSKPWCRTIDDPYFIKLHLSHSLKTITNHSLILSHWEDHFFSVDYDLFETTQRLNHPFGERRKTLQILGSCNGLLALVDDKDGIFLWNPSTRKSQVLPFNEIGFSSPSSSYYGFGYDPISDEYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPDGCLDKILRFHIKAMGGDICLTSTYRETNNFVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVALPVAFSKDGDEVLFFIGYKWFNWGRRIDSFVWYDLGSQVVEDAVIRGIPTSFDVNLYVDSLVPLNSNAQQ 369

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1344102267|gb|PPD76587.1| (hypothetical protein GOBAR_DD26488 [Gossypium barbadense])

HSP 1 Score: 722.62 bits (1864), Expect = 0.000e+0
Identity = 345/369 (93.50%), Postives = 359/369 (97.29%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHE+ SDILCRLSVKDLLRFRSVSKPWC +ID+PYFIKLHLSHSLKT TNHSLILSHWE +FFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD D IFLWNPSTRKSQVLPFNEIGFS PSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELPDGCL+K+LRFHIKAMGGDICLTSTYRETN+ VVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVA+P+AFSKDGDEVLFFIGYKWFNWGR IDSFVWYDLGSQVVED VIRGIP+SFDV+LYVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEVTSDILCRLSVKDLLRFRSVSKPWCRTIDDPYFIKLHLSHSLKTITNHSLILSHWEGHFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDKDGIFLWNPSTRKSQVLPFNEIGFSFPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPDGCLEKILRFHIKAMGGDICLTSTYRETNNFVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVALPVAFSKDGDEVLFFIGYKWFNWGRRIDSFVWYDLGSQVVEDAVIRGIPTSFDVNLYVDSLVPLNSNAQQ 369

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1028938541|ref|XP_016712454.1| (PREDICTED: F-box protein CPR30-like [Gossypium hirsutum])

HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 330/374 (88.24%), Postives = 347/374 (92.78%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSS-----PSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHEM SDILCRLSVKDLLRFRSVSKPWCSSI++PYFIKLHLSHSLKT TNHSLILSHWED FFSV+  LFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD DRIFLWNPSTRKSQVLP  EI FSS       STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYS RSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SR KELVGFDLGSEEFRFLELPD CLDKVL FHIKA+GGDICLTSTYRET+++VVDVWIMKEYGVKQSWFKLISWKEP+FMPCS VA+PLAFSKDG EVLFFIGYK FNWGR +DSFVWYDL S+VVE+VVIR IP+SF+V+ YVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKPWCSSIEDPYFIKLHLSHSLKTNTNHSLILSHWEDQFFSVNCALFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDKDRIFLWNPSTRKSQVLPSTEIEFSSTLISSAPSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSFRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRKKELVGFDLGSEEFRFLELPDCCLDKVLWFHIKAIGGDICLTSTYRETDNVVVDVWIMKEYGVKQSWFKLISWKEPHFMPCSTVALPLAFSKDGYEVLFFIGYKRFNWGRRVDSFVWYDLRSKVVENVVIRDIPTSFEVNWYVDSLVPLNSNAQQ 374

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|823146272|ref|XP_012473025.1| (PREDICTED: F-box protein CPR30-like [Gossypium raimondii] >gi|763754589|gb|KJB21920.1| hypothetical protein B456_004G021400 [Gossypium raimondii])

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 322/367 (87.74%), Postives = 342/367 (93.19%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            MARLPHEM SDILCRLSVKDLLRFRSVSKPWC +ID+PYFIKLHLSHS+KT TNHSLILSH ED FFSV+  LFETTQRLNHPFG+QRKTLQILGSCNGLLALVDD DRIFLWNPSTRK QVLPFNEIGFSSPSSTYYGFGYDPISDDYKL+RMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELP+  LDKVL FHI A+GGDICLTSTYRET+++VVDVWIMKEYGVKQSWFKLISWKEP  +PCS VA+PLA SKDG EVLFFI YKWFNWGR IDSFVWY L SQ VE+VVIR IP+SF+V+ YVDSLVPLNSNA
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKPWCRTIDDPYFIKLHLSHSVKTNTNHSLILSHGEDNFFSVNCALFETTQRLNHPFGDQRKTLQILGSCNGLLALVDDKDRIFLWNPSTRKFQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLIRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPECRLDKVLWFHINAVGGDICLTSTYRETDNVVVDVWIMKEYGVKQSWFKLISWKEPDLIPCSTVALPLALSKDGGEVLFFIEYKWFNWGRRIDSFVWYYLRSQEVENVVIRDIPTSFEVNWYVDSLVPLNSNA 367

[Close]

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1347718203|gb|PPS14598.1| (hypothetical protein GOBAR_AA05977 [Gossypium barbadense])

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 301/353 (85.27%), Postives = 315/353 (89.24%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDV 353
            MARLPHEM SDILCRLSVKDLLRFRSVSKPWCSSID+PYFIKLHLSHSLKT TNHSLILSHWED FFSV+  LFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD DRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYS RSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SR KELVGFDLGSEEFRFLELPD CLDKVL FHIKA+GGDICLTSTYRET+++V                       P+FMPCS VA+PLAFSKDG EVLFFIGYKWFNWGR +DSFVWYDL SQVVE+VVIR IP+SF+V
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKPWCSSIDDPYFIKLHLSHSLKTNTNHSLILSHWEDQFFSVNCALFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDKDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSFRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRKKELVGFDLGSEEFRFLELPDCCLDKVLWFHIKAIGGDICLTSTYRETDNVV-----------------------PHFMPCSTVALPLAFSKDGYEVLFFIGYKWFNWGRRVDSFVWYDLRSQVVENVVIRDIPTSFEV 330

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BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1344102264|gb|PPD76584.1| (hypothetical protein GOBAR_DD26485 [Gossypium barbadense])

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 295/367 (80.38%), Postives = 315/367 (85.83%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            MARLPHEM SDILCRLSVKDLLRFRSVSKP                              H ED FFSV+  LFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD DRIFLWNPSTRK QVLPF+EIGFSSPSSTYYGFGYDPISDDYKL+RMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELP+  LDKVL FHI A+GGDICLTSTYRET+++VVDVWIMKEYGVKQSWFKLISWKEP+FMP S VA+PLA +KDG +VLFFI YKWFN GR +DSFVWYDL SQ VE+VVIR IP+SF+V+ YVDSLVPLNSNA
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKP-----------------------------CHGEDNFFSVNCALFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDRDRIFLWNPSTRKFQVLPFSEIGFSSPSSTYYGFGYDPISDDYKLIRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPECRLDKVLWFHINAVGGDICLTSTYRETDNVVVDVWIMKEYGVKQSWFKLISWKEPHFMPWSTVALPLALAKDGGKVLFFIEYKWFNRGRRVDSFVWYDLRSQEVENVVIRDIPTSFEVNWYVDSLVPLNSNA 338

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BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1028938628|ref|XP_016712498.1| (PREDICTED: F-box protein CPR30-like [Gossypium hirsutum] >gi|1347718213|gb|PPS14608.1| hypothetical protein GOBAR_AA05987 [Gossypium barbadense])

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 287/386 (74.35%), Postives = 316/386 (81.87%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPS-------------------STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            M  +PHE+  DIL RLSVKDLLRF+ VSKPWCSSI++PYFIKLHLSHSLKT TNHSLIL H E +FFSV+ D  ETT  LNHPFGE +K++QILGSCNGLLALV+ ND IFLWNPSTR+SQVL  NEI F+SPS                   STYYGFGYDPISDDYKLVRMVQS G +DEYFHSEAKVYSLRSNCWRRIKDVCFY KFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPD CLD+     IKAMGGDICLT+T+R+ ++  VDVWIMKEYGVK+SW KLIS  +P F+P S  A+PLA SK+GD+VL FI YKW NWG   D+FVWYDLGSQ VE V IRG+P+SFDV LYVDSLVPLNSNA
Sbjct:    1 MGTIPHEITIDILGRLSVKDLLRFKCVSKPWCSSIEDPYFIKLHLSHSLKTNTNHSLILRHREYHFFSVNCDSLETTHILNHPFGEPKKSIQILGSCNGLLALVNHNDSIFLWNPSTRESQVLTSNEIEFASPSPWIWFYVSQCSSPSIYIARSTYYGFGYDPISDDYKLVRMVQSCGLDDEYFHSEAKVYSLRSNCWRRIKDVCFYLKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDCCLDEAFLIDIKAMGGDICLTATFRDFSN--VDVWIMKEYGVKESWIKLISCYQPEFIPDSPFAVPLAVSKNGDKVLLFIAYKWCNWGSRSDNFVWYDLGSQRVEKVEIRGLPASFDVDLYVDSLVPLNSNA 384

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BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1050558851|ref|XP_017635998.1| (PREDICTED: F-box protein CPR30-like [Gossypium arboreum])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 287/386 (74.35%), Postives = 316/386 (81.87%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPS-------------------STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            M  +PHE+  DIL RLSVKDLLRF+ VSKPWCSSI++PYFIKLHLSHSLKT TNHSLIL H E +FFSV+ D  ETT  LNHPFGE +K++QILGSCNGLLALV+ ND IFLWNPSTR+SQVL  NEI F+SPS                   STYYGFGYDPISDDYKLVRMVQS G +DEYFHSEAKVYSLRSNCWRRIKDVCFY KFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPD CLD+     IKAMGGDICLT+T+R+ ++  VDVWIMKEYGVK+SW KLIS  +P F+P S  A+PLAFSK+GD+VL FI YK  NWG   D+FVWYDLGSQ VE V IRG+P+SFDV LYVDSLVPLNSNA
Sbjct:    1 MGTIPHEITIDILGRLSVKDLLRFKCVSKPWCSSIEDPYFIKLHLSHSLKTNTNHSLILRHREYHFFSVNCDSLETTHILNHPFGEPKKSIQILGSCNGLLALVNHNDSIFLWNPSTRESQVLTSNEIEFASPSPWIWFYVSQCSSPSIYIARSTYYGFGYDPISDDYKLVRMVQSCGLDDEYFHSEAKVYSLRSNCWRRIKDVCFYLKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDCCLDEAFLIDIKAMGGDICLTATFRDFSN--VDVWIMKEYGVKESWIKLISCYKPEFIPDSPFAVPLAFSKNGDKVLLFIAYKC-NWGSRSDNFVWYDLGSQRVEKVEIRGLPASFDVDLYVDSLVPLNSNA 383

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BLAST of Ghir_A08G001990.1 vs. NCBI nr
Match: gi|1028938543|ref|XP_016712455.1| (PREDICTED: F-box protein CPR30-like [Gossypium hirsutum])

HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0
Identity = 272/374 (72.73%), Postives = 307/374 (82.09%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSS-----TYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MA L H++  +IL  LSVKDLLRF+ VSK WC SID+PYFIKLHLSHS+KT TN+SLIL  W   F SV+YD  +TTQ +  P  +    ++ILGSCNGLLAL+DD DRIFLWNPSTRKSQVLP  EI FSS S      TYYGFGY+PISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFY KF+REFGFLANNALHWMVF+TP+S N+ LVGFDLGSEEFRF+ELPD CLDK+  F IKAMGGD+CLT+TYRE N++VVDVWIMKEYGVKQSW K ISW EP+ +  + VA+PLAFSK+G++VLF I YKW N  +    FVWYDLGSQ VE+V IR IP+SFDV LYVDSLVPLNSNA Q
Sbjct:    1 MATLSHDLTIEILRGLSVKDLLRFKCVSKLWCFSIDDPYFIKLHLSHSVKTNTNYSLILRRWGYDFLSVNYDSLKTTQIITPPLTDS--PIKILGSCNGLLALIDDKDRIFLWNPSTRKSQVLPSTEIDFSSTSISSAPSTYYGFGYEPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYLKFNREFGFLANNALHWMVFKTPQSDNRNLVGFDLGSEEFRFVELPDFCLDKLFWFGIKAMGGDLCLTATYREINNVVVDVWIMKEYGVKQSWIKSISWNEPHNISDTPVAVPLAFSKNGNKVLFNIAYKWCNLVKRGGKFVWYDLGSQRVENVGIRDIPTSFDVELYVDSLVPLNSNAPQ 372

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 1.541e-62
Identity = 135/382 (35.34%), Postives = 204/382 (53.40%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSST----YYGFGYDPISDDYKLVRMVQSHGNNDE----YFHSEAKVYSLRSNCWRRIKDVC---------FYH-KFSREFGFLANNALHWMVFRTPESRNKEL-VGFDLGSEEFRFLELPDGCLDKV--LRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLV 361
            MA +P ++++DI  RL  K L+R R++SKP    I++P FI+ HL H +  T +H +IL       +SVD D  ++   + HP      T ++ GS NGL+ L +    + ++NPSTR+   LP + I     SST    +YG GYD +SDDYK+VRMVQ   ++++     F  E KV+SL+ N W+RI+ V          +YH  + R +G LA N+LHW++ R P      L V FDL  EEF  +  P+   +    ++  I  + G +CL   Y ++    VDVW+MKEY V+ SW K+ + ++P  +       PL +SKD  +VL  +              VW+DL S+ +  + I+  PSS+   L V SLV
Sbjct:    1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHL-HRVLQTGDHLMILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS---YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNT---------KLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLV 368

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB244_ARATH (F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 4.691e-41
Identity = 122/382 (31.94%), Postives = 178/382 (46.60%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSST----YYGFGYDPISDDYKLVRMVQ---SHGNNDEYFHSEAKVYSLRSNCWRRIKDVC------------FYHKFSRE-FGFLANNALHWMVFRTPESRN-KELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLV 361
            MA  P ++I+++  RL    L++ R +SKP  S ID+P F+  HL   L+ T  H +IL        +V+ D  E    + HP      T ++ GS NG++ L +    + ++NPSTRK   LP   I F     T    +YG GYD + DD+K+VR+VQ     G        E KV+SL+ N W+R   VC            +YH   R  +G + NN LHW++ R         ++ +DL S++   L  P   L       I  + G +CL   Y E +   VDVW++KEY   +SW KL    +P  +       PL  SKD  ++L  I            + +W+DL SQ +    I    SSF   + V SLV
Sbjct:    1 MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLE-TGEHLMILLRGPRLLRTVELDSPENVSDIPHPLQAGGFT-EVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKR---VCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQE-LYIEDNMDIGVLDGCVCLM-CYDEYSH--VDVWVLKEYEDYKSWTKLYRVPKPESVESVEFIRPLICSKDRSKILLEINNA--------ANLMWFDLESQSLTTAGIE-CDSSFTADILVSSLV 364

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.160e-38
Identity = 120/412 (29.13%), Postives = 196/412 (47.57%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSL-----ILSH--------------------WEDYFFSVDYDLFETTQR---LNHPFGEQRKTL------------QILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFN----EIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHK-FSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFH---IKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSS--FDVSLYVDSLVPLNS 365
            LP E+I++IL RL  K + RFR VSK +C+   +P F K+HL   L+  +  SL     + SH                      +Y    D  +F    R    +H + ++R  L            +I+GS NGL+ +      +FL+NP+T  S+ LP N     + +   +   YGFG+D ++DDYKLV++V +  +       +A VYSL+++ WRRI ++ + H   S   G   N A+HW VF       + +V FD+ +EEFR + +PD   D   RF    + ++ G +C+ ++  + +D   D+W+M EYG  +SW ++        M       PL  +K+ +EVL  +              V Y+  +    ++ I G+  S  F+ + YV+SL+  NS
Sbjct:   36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSED-----ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHW-VFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHD---DIWVMSEYGEAKSWSRIRINLLYRSMK------PLCSTKNDEEVLLELD----------GDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLISPNS 422

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.652e-21
Identity = 91/298 (30.54%), Postives = 132/298 (44.30%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLH---LSHSLKTTTNHS----LILSHWEDYFFSVDYDLFETTQRLNHPFGE--QRKTLQILGSCNGLLAL-VDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTY-YGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRR----IKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLIS 286
            LP EM+ +IL RL VK L RF+ V   W S I    F   H   L  S  TT+  S    +  S +      +      +T  ++   GE   R   Q++G+C+GL+   VD +  ++LWNP+ +  Q L  +++  S       YGFGYD   DDYK+V ++Q           E K+YS R   WR        V    K SR  G   N  L+W    +  S       +D+  +EF+ L  P  C        +  + G + +    +  N    DVW+MKE+G   SW KL+S
Sbjct:   14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQR----HQVKIETKIYSTRQKLWRSNTSFPSGVVVADK-SRS-GIYINGTLNWAATSSSSSWTIIS--YDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGAN---ADVWVMKEFGEVYSWSKLLS 300

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB115_ARATH (F-box protein At2g21930 OS=Arabidopsis thaliana OX=3702 GN=At2g21930 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.922e-21
Identity = 106/375 (28.27%), Postives = 177/375 (47.20%), Query Frame = 0

Query:    2 ARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWED---YFFSVDYDLFETTQRLNHPFGEQRKTLQI---LGSCNGLL------ALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQS-HGNNDEYFHSEAKVYSLR-SNCWRRIKDV---CFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLE-LPDGCLD-KVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKL---IS----WKEPYFMPCSIVAIPLAFSKDGDEVLF---FIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGI 347
             ++P ++I +IL RL VK L RF SVSK + S I N  F+K +L +S  +T   SLI +        FFS+  D  E+T      +      LQ+     S +GL+       L+  + R+ + NPSTR+S +LP  +   ++    Y+  GYDPI  DYK++ M++  H     Y   E +V++LR  N WR ++D    C  H+ + +   L  N + + V     + N  ++ FD+ SE+F  ++  PDG L+ K+ R+  K         +     +D  +++W++++   K  W K+   +S     + PYF  C         + D  E++    F+  K F         ++Y      +  VVI+GI
Sbjct:   23 VQIPFDLIPEILKRLPVKTLARFLSVSKEYTSIIRNRDFMKSYLINS--STRPQSLIFTIAGGGIHCFFSL-IDQGESTSSSKPTYLMNCPHLQLKTFAPSVHGLICHGPPSTLIVSSPRLIVSNPSTRRSIILPKID---ANHECIYHHMGYDPIDGDYKVLCMMKGMHVYQRRYLAKELQVFTLRKGNSWRMVEDFPPHCLCHEDTPD---LCINGVLYYVAMLDTASNHAVMSFDVRSEKFDLIKGGPDGDLNPKLTRYEGKP--------ALLFPGSDYRINLWVIED-AAKHEWSKMSYDVSSTSLIRNPYFHHCVFC------TNDAGEIVLAPDFVRTKTF-------VVLYYHPKKNTMRSVVIKGI 366

[Close]

BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB145_ARATH (Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.118e-20
Identity = 88/324 (27.16%), Postives = 150/324 (46.30%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFE--TTQRLNHPFGEQR-KTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCF--YHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIP-----LAFSKDGDEVLFFIGY 317
            LP E+  +IL RLS+KDL RFR V K W   I++P F + +   S       +  +S ++  F+ +D +      T +L+ P  +        +  C+G L +   N  + +WNP +++ +++P   I      S   GFGYDP+ DDYK+V  +      D    S A V+  R+  W     + +  +H   R   FL +  L+W+ +R+  S ++ ++ F+L + E+R L LP      V    +      +C+T       +I + V  M++ G   SW K+IS     F+             ++F++  D V+ F GY
Sbjct:    5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMS------PAKFVSFYDKNFYMLDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFKIVPNPGI---YQDSNILGFGYDPVHDDYKVVTFI------DRLDVSTAHVFEFRTGSWGESLRISYPDWHYRDRRGTFL-DQYLYWIAYRS--SADRFILCFNLSTHEYRKLPLP-VYNQGVTSSWLGVTSQKLCITEYEMCKKEIRISV--MEKTG---SWSKIISLSMSSFISVQDRIYDYQVEFVSFTRKNDLVVTFTGY 304

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.234e-19
Identity = 87/317 (27.44%), Postives = 136/317 (42.90%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDN-------------PYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD--NDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHG---NND---------EYFHSEAKVYSLRSNC------WRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPD-GCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFK 283
            +  LP ++I+DI  RL +  + R   V + W S +               P  + LH    ++    H L LS  E             T++    F        ++GSCNGLL L D   ND ++L+NP T  S  LP     +       +GFG+  ++ +YK++++V   G   NN+         +Y  SE ++ +L S        WR +     Y    R    L N  LH++        +++ V FDL  EEF+ +  PD G L++     +   G   CL +     N   +D+W+MK YGVK+SW K
Sbjct:   25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLL-LHCDSPIRNGL-HFLDLSEEEKRI---------KTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHD-QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP-YKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKG---CLCAVVY-GNYGKLDIWVMKTYGVKESWGK 324

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB87_ARATH (Putative F-box protein At1g71320 OS=Arabidopsis thaliana OX=3702 GN=At1g71320 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.102e-18
Identity = 91/334 (27.25%), Postives = 146/334 (43.71%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSL--ILSHW-----EDYFFSVDYDLFETTQRLNH----PFGE-QRKTLQILGSCNG--LLALVDDNDRIFLWNPSTRKSQVL-------PFNEIGFSSPS-----------------------STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKF-----SREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWK 288
            +P ++   I   L +K L RF+ +SK W S I++ YF    L  +   T N     I  H+     E+Y  S+ + L ET  R +      F E Q KT+Q+LGSC+G  LL + DD   I+L NP+T++   L       PF  + + +P+                        +  GFG D +   YK+V +   +  +D  F  +AKV SL +   R   DV FY          +    AN +L W+  +     + +L+  DL +EEFR++ LP+          +  +   +CL+     +N +   VW + +    + W K+ S K
Sbjct:   14 IPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFSHKRLIRTGLPTPNMKFLHISQHFTANFVEEYSNSITF-LLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLVLLRIHDDFRSIYLINPTTKEHMKLSPEFMQWPFT-LSYLTPAMANKPWRQLSQSVLDYDISVKRMPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEF--KAKVLSLDNGEQR---DVGFYDIHHCIFCDEQTSVYANGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLPECDTKYATNIEMWNLNERLCLSDVLESSNLV---VWSLHQEYPTEKWEKIYSIK 337

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB52_ARATH (Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.172e-16
Identity = 80/318 (25.16%), Postives = 137/318 (43.08%), Query Frame = 0

Query:    5 PHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLIL-SHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQI----------LGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYG----FGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRS--NCWRRIKDVCFYHKFSREFGFLANNALHWMVF--RTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLA 303
            P ++I +IL RL VK +LRFR VSK W S+  +PYF     S+  +++T  SL++    +D  F   +       +  H + +   +  I            S +GL++       I +WNP+ R+  +LP        P  ++ G     GYDP+   +KL+ M      N +    E +V +L S    WRRIK    +    R +G   N  +++  +  +     N  ++ F++ SE+F  + LP G    +L   I   G   C+ +T  + N  +  +W +++              E +   C +   PLA
Sbjct:   32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTN---SYEARSSTRPSLLMFFKNKDKLFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPI-IWNPTMRQFLILP-------KPEKSWKGLSVFLGYDPVEGKHKLMCM------NRDNTSDECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTIMSFEVRSEKFDTITLPSGSFANML---IPYQGRLACVNNTMDDVNGGIT-LWTLED-------------AEKHIWSCKLFLAPLA 315

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BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Match: FB249_ARATH (Putative F-box protein At4g38870 OS=Arabidopsis thaliana OX=3702 GN=At4g38870 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.369e-15
Identity = 70/249 (28.11%), Postives = 119/249 (47.79%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDL-FETTQRLN-------------HPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHG--NNDEYFHSEAKVYSL--RSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELP 234
            LP ++I +IL +LS+K L+RF  VSK W S I +PYF+KL L+ SLK     SL+         S+   +  ++T+ ++             H     ++ + I  S +GL+     +  + ++NP TR+S  LP  + G  + +      GYDP+  +YK+V + +      N      E +V +L  R + WR I D+   H    E     N  L++  F   +     ++ FD+ SE+F  +++P
Sbjct:   53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRP--KSLVFVFRAQSLGSIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICYGPPSS-LVIYNPCTRRSITLPKIKAGRRAINQY---IGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSE-ELCINGVLYYRAFIGTKLNESAIMSFDVRSEKFDLIKVP 294

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A1U8LD08_GOSHI (F-box protein CPR30-like OS=Gossypium hirsutum OX=3635 GN=LOC107926215 PE=4 SV=1)

HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2P5G3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G021700 PE=4 SV=1)

HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0
Identity = 345/369 (93.50%), Postives = 361/369 (97.83%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHE+ SDILCRLSVKDLLRFRSVSKPWC +ID+PYFIKLHLSHSLKT TNHSLILSHWED+FFSVDYDLFETTQRLNHPFGE+RKTLQILGSCNGLLALVDD D IFLWNPSTRKSQVLPFNEIGFSSPSS+YYGFGYDPISD+YKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELPDGCLDK+LRFHIKAMGGDICLTSTYRETN+ VVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVA+P+AFSKDGDEVLFFIGYKWFNWGR IDSFVWYDLGSQVVED VIRGIP+SFDV+LYVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEVTSDILCRLSVKDLLRFRSVSKPWCRTIDDPYFIKLHLSHSLKTITNHSLILSHWEDHFFSVDYDLFETTQRLNHPFGERRKTLQILGSCNGLLALVDDKDGIFLWNPSTRKSQVLPFNEIGFSSPSSSYYGFGYDPISDEYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPDGCLDKILRFHIKAMGGDICLTSTYRETNNFVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVALPVAFSKDGDEVLFFIGYKWFNWGRRIDSFVWYDLGSQVVEDAVIRGIPTSFDVNLYVDSLVPLNSNAQQ 369

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A1U8LH05_GOSHI (F-box protein CPR30-like OS=Gossypium hirsutum OX=3635 GN=LOC107926165 PE=4 SV=1)

HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 330/374 (88.24%), Postives = 347/374 (92.78%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSS-----PSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MARLPHEM SDILCRLSVKDLLRFRSVSKPWCSSI++PYFIKLHLSHSLKT TNHSLILSHWED FFSV+  LFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD DRIFLWNPSTRKSQVLP  EI FSS       STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYS RSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SR KELVGFDLGSEEFRFLELPD CLDKVL FHIKA+GGDICLTSTYRET+++VVDVWIMKEYGVKQSWFKLISWKEP+FMPCS VA+PLAFSKDG EVLFFIGYK FNWGR +DSFVWYDL S+VVE+VVIR IP+SF+V+ YVDSLVPLNSNAQQ
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKPWCSSIEDPYFIKLHLSHSLKTNTNHSLILSHWEDQFFSVNCALFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDKDRIFLWNPSTRKSQVLPSTEIEFSSTLISSAPSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSFRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRKKELVGFDLGSEEFRFLELPDCCLDKVLWFHIKAIGGDICLTSTYRETDNVVVDVWIMKEYGVKQSWFKLISWKEPHFMPCSTVALPLAFSKDGYEVLFFIGYKRFNWGRRVDSFVWYDLRSKVVENVVIRDIPTSFEVNWYVDSLVPLNSNAQQ 374

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2RS12_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G021400 PE=4 SV=1)

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 322/367 (87.74%), Postives = 342/367 (93.19%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            MARLPHEM SDILCRLSVKDLLRFRSVSKPWC +ID+PYFIKLHLSHS+KT TNHSLILSH ED FFSV+  LFETTQRLNHPFG+QRKTLQILGSCNGLLALVDD DRIFLWNPSTRK QVLPFNEIGFSSPSSTYYGFGYDPISDDYKL+RMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVF+TP+SRN+ELVGFDLGSEEFRFLELP+  LDKVL FHI A+GGDICLTSTYRET+++VVDVWIMKEYGVKQSWFKLISWKEP  +PCS VA+PLA SKDG EVLFFI YKWFNWGR IDSFVWY L SQ VE+VVIR IP+SF+V+ YVDSLVPLNSNA
Sbjct:    1 MARLPHEMTSDILCRLSVKDLLRFRSVSKPWCRTIDDPYFIKLHLSHSVKTNTNHSLILSHGEDNFFSVNCALFETTQRLNHPFGDQRKTLQILGSCNGLLALVDDKDRIFLWNPSTRKFQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLIRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFKTPQSRNQELVGFDLGSEEFRFLELPECRLDKVLWFHINAVGGDICLTSTYRETDNVVVDVWIMKEYGVKQSWFKLISWKEPDLIPCSTVALPLALSKDGGEVLFFIEYKWFNWGRRIDSFVWYYLRSQEVENVVIRDIPTSFEVNWYVDSLVPLNSNA 367

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A1U8LGI8_GOSHI (F-box protein CPR30-like OS=Gossypium hirsutum OX=3635 GN=LOC107926221 PE=4 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 287/386 (74.35%), Postives = 316/386 (81.87%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPS-------------------STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            M  +PHE+  DIL RLSVKDLLRF+ VSKPWCSSI++PYFIKLHLSHSLKT TNHSLIL H E +FFSV+ D  ETT  LNHPFGE +K++QILGSCNGLLALV+ ND IFLWNPSTR+SQVL  NEI F+SPS                   STYYGFGYDPISDDYKLVRMVQS G +DEYFHSEAKVYSLRSNCWRRIKDVCFY KFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPD CLD+     IKAMGGDICLT+T+R+ ++  VDVWIMKEYGVK+SW KLIS  +P F+P S  A+PLA SK+GD+VL FI YKW NWG   D+FVWYDLGSQ VE V IRG+P+SFDV LYVDSLVPLNSNA
Sbjct:    1 MGTIPHEITIDILGRLSVKDLLRFKCVSKPWCSSIEDPYFIKLHLSHSLKTNTNHSLILRHREYHFFSVNCDSLETTHILNHPFGEPKKSIQILGSCNGLLALVNHNDSIFLWNPSTRESQVLTSNEIEFASPSPWIWFYVSQCSSPSIYIARSTYYGFGYDPISDDYKLVRMVQSCGLDDEYFHSEAKVYSLRSNCWRRIKDVCFYLKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDCCLDEAFLIDIKAMGGDICLTATFRDFSN--VDVWIMKEYGVKESWIKLISCYQPEFIPDSPFAVPLAVSKNGDKVLLFIAYKWCNWGSRSDNFVWYDLGSQRVEKVEIRGLPASFDVDLYVDSLVPLNSNA 384

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A1U8LCZ2_GOSHI (F-box protein CPR30-like OS=Gossypium hirsutum OX=3635 GN=LOC107926166 PE=4 SV=1)

HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0
Identity = 272/374 (72.73%), Postives = 307/374 (82.09%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSS-----TYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNAQQ 369
            MA L H++  +IL  LSVKDLLRF+ VSK WC SID+PYFIKLHLSHS+KT TN+SLIL  W   F SV+YD  +TTQ +  P  +    ++ILGSCNGLLAL+DD DRIFLWNPSTRKSQVLP  EI FSS S      TYYGFGY+PISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFY KF+REFGFLANNALHWMVF+TP+S N+ LVGFDLGSEEFRF+ELPD CLDK+  F IKAMGGD+CLT+TYRE N++VVDVWIMKEYGVKQSW K ISW EP+ +  + VA+PLAFSK+G++VLF I YKW N  +    FVWYDLGSQ VE+V IR IP+SFDV LYVDSLVPLNSNA Q
Sbjct:    1 MATLSHDLTIEILRGLSVKDLLRFKCVSKLWCFSIDDPYFIKLHLSHSVKTNTNYSLILRRWGYDFLSVNYDSLKTTQIITPPLTDS--PIKILGSCNGLLALIDDKDRIFLWNPSTRKSQVLPSTEIDFSSTSISSAPSTYYGFGYEPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYLKFNREFGFLANNALHWMVFKTPQSDNRNLVGFDLGSEEFRFVELPDFCLDKLFWFGIKAMGGDLCLTATYREINNVVVDVWIMKEYGVKQSWIKSISWNEPHNISDTPVAVPLAFSKNGNKVLFNIAYKWCNLVKRGGKFVWYDLGSQRVENVGIRDIPTSFDVELYVDSLVPLNSNAPQ 372

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2QXR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G022100 PE=4 SV=1)

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 268/371 (72.24%), Postives = 303/371 (81.67%), Query Frame = 0

Query:    7 EMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPS-----STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMP--CSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWI---DSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            EMI +ILCRLSVKDLLRF+  SK WCS ID+PYFIKLHLSHSLKT TNHSLIL  +E +FFSV+YD  ET Q+LNHP GEQ+K ++ILGSCNGLLAL+DDNDRIFLWNPSTRK QVLP  EI  SSPS     S +YGFGYDPISDDYKLVRMVQ HGNN  Y HSEAKVYSLRSNCWRRIKD CFY  F+REFGFLANNALHWMVF+ P+S  + LVGFDL +EEFR LELP+ CLDK+  + IKAMGG ICLT+TYRE + +VVDVWIMKEYGVK+SW KLISW EP+F+P   S+VA PLAFSK+GD+VLF I YK  N+G+W    D FVWYDL  + VE V IRGIP+SFDV  YV+SLVP+N NA
Sbjct:    8 EMI-EILCRLSVKDLLRFKCASKHWCSLIDDPYFIKLHLSHSLKTKTNHSLILRRYEYHFFSVNYDSGETIQKLNHPLGEQKKAIKILGSCNGLLALIDDNDRIFLWNPSTRKFQVLPSTEIEISSPSICFDRSNFYGFGYDPISDDYKLVRMVQLHGNNKGYLHSEAKVYSLRSNCWRRIKDFCFYLIFAREFGFLANNALHWMVFKPPKSGKQNLVGFDLRTEEFRSLELPEFCLDKLFCYDIKAMGGFICLTATYRELDTVVVDVWIMKEYGVKESWIKLISWNEPHFIPRFPSLVA-PLAFSKNGDKVLFNISYKCRNFGKWYNLRDKFVWYDLWGERVEKVEIRGIPTSFDVHFYVESLVPINGNA 376

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2MSD7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G021600 PE=4 SV=1)

HSP 1 Score: 514.227 bits (1323), Expect = 1.602e-180
Identity = 262/366 (71.58%), Postives = 294/366 (80.33%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSN 366
            M R+PHE   DIL RLSVKDLLRF+ VSKPWCSSI++PYFIK HLSHSLKT TNHSL L H E +FFSV+ D  ETTQ LNHPFGE ++T+QILGSCNGLLALV+DND + LWNPSTR+SQ  P +  G+ +  STYYGFGYDPISDDYKLVRM+QS+G +DE  HSEAKVYSLRSN WRRIKD  FY  FSREFG LANNALHWMVFRTPE  NKELVGFDLGSEEFRFLELPD  LD+   F IKAMGGDICLT+T+R+   I VDVWIMKEYGVK+SW KL+S+ EP  +  S   +PLAFSK+GD+VL FI YKW +       FVWYDL SQ VE V IRGIP+SFDV LYVDSLVPLN+N
Sbjct:    1 MGRIPHETTIDILGRLSVKDLLRFKCVSKPWCSSIEDPYFIKFHLSHSLKTNTNHSLFLRHREYHFFSVNCDSLETTQILNHPFGEPKRTIQILGSCNGLLALVNDNDSLLLWNPSTRESQRSPPS--GYIA-RSTYYGFGYDPISDDYKLVRMIQSYGLHDENVHSEAKVYSLRSNRWRRIKDFSFYLNFSREFGILANNALHWMVFRTPEPLNKELVGFDLGSEEFRFLELPDCYLDEAFFFDIKAMGGDICLTATFRDF--INVDVWIMKEYGVKESWIKLVSYYEPESIQASPFPVPLAFSKNGDKVLLFIAYKWCHTATRTGKFVWYDLESQRVEKVEIRGIPASFDVDLYVDSLVPLNTN 361

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BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2RS05_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G021900 PE=4 SV=1)

HSP 1 Score: 504.597 bits (1298), Expect = 6.421e-177
Identity = 255/368 (69.29%), Postives = 290/368 (78.80%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPS-----STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPL 363
            MA LPHEM  +IL RLSVKDLLRF+ VSKPWCSSID+P FIKLHLSHS+KT TNHSLIL H E +FFSV+YD  +TTQRLNHP GEQ+  ++ILG+CNGLLAL+DDN RIFLWNPSTRKSQVLP  EI FSSPS     STYYGFGYDPI DDYKLVRMVQ HG N+ Y HSEAKVYSLRSN WRRIKD CFY  F REFGFLA+NAL+WMV +TP+S NK +VGFDLG+EEFRF+ELPD CL+K    ++KAMGG +CL +TY E ND VVD+WIMKE     SW KLISWK+   +    + IPLAFSK GD+VLF I          +  FVWYDLGS+ VE+V IRG+PSSFDV LYV+SLVPL
Sbjct:    1 MATLPHEMTIEILLRLSVKDLLRFKCVSKPWCSSIDDPDFIKLHLSHSVKTNTNHSLILRHCEYHFFSVNYDSLKTTQRLNHPLGEQKTPIKILGTCNGLLALIDDNGRIFLWNPSTRKSQVLPSTEIEFSSPSIFFPRSTYYGFGYDPIPDDYKLVRMVQVHGKNNSYLHSEAKVYSLRSNSWRRIKDFCFYLSFYREFGFLADNALYWMVLKTPQSGNKSIVGFDLGTEEFRFVELPDSCLNKRFCMNMKAMGGYLCLIATYTEFNDDVVDIWIMKE-----SWIKLISWKKSESILGFPIVIPLAFSKSGDKVLFSIA---------LHKFVWYDLGSKRVENVGIRGLPSSFDVDLYVESLVPL 354

[Close]

BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Match: A0A0D2RS17_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G022000 PE=4 SV=1)

HSP 1 Score: 499.204 bits (1284), Expect = 1.327e-174
Identity = 256/375 (68.27%), Postives = 294/375 (78.40%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVD-YDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSS-----PSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPC--SIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLVPLNSNA 367
            MA L H++  +IL  LSVKDLLRF+ VSK WCSSI++ YFIKLHLS SLKT TNHSLIL      F SV+ YD  +TTQRLNHP GEQ+K L+ILGSCNGLLAL+DD++RIFLWNPSTRKSQVLP  EI FSS     P STYYGFGYDPISDDYKLVRMVQ HGNN  Y HSEAKVYSLRSNCWRRIKD CFY    R+FG LANNALHWMVF+TP+S  + LVGFDLG+EEFRFLELPD CLDK+  + IKAMGG  CLT+T+R++ND+V +VWIMKEYGVK+SW KLISW +P+ + C  S+V +PLAFSK+GD+VLF            + +FVWYDLGS+ VE V IR +P   DV LYV SLVPLNSNA
Sbjct:    1 MATLSHDLAIEILRGLSVKDLLRFQCVSKLWCSSINDSYFIKLHLSDSLKTITNHSLILRKSGYDFVSVNVYDSPKTTQRLNHPLGEQKKLLKILGSCNGLLALIDDDNRIFLWNPSTRKSQVLPSTEIDFSSASSFFPRSTYYGFGYDPISDDYKLVRMVQLHGNNKGYLHSEAKVYSLRSNCWRRIKDFCFYLILHRKFGILANNALHWMVFKTPQSWKQNLVGFDLGTEEFRFLELPDLCLDKLFCYDIKAMGGYNCLTATFRDSNDVVAEVWIMKEYGVKESWVKLISWNQPHLLSCFPSVVVVPLAFSKNGDKVLF---------SSDVHTFVWYDLGSKKVEKVGIRDVPIIHDVDLYVQSLVPLNSNA 366

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT4G12560.2 (| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413)

HSP 1 Score: 208.764 bits (530), Expect = 1.117e-63
Identity = 135/382 (35.34%), Postives = 204/382 (53.40%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSST----YYGFGYDPISDDYKLVRMVQSHGNNDE----YFHSEAKVYSLRSNCWRRIKDVC---------FYH-KFSREFGFLANNALHWMVFRTPESRNKEL-VGFDLGSEEFRFLELPDGCLDKV--LRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLV 361
            MA +P ++++DI  RL  K L+R R++SKP    I++P FI+ HL H +  T +H +IL       +SVD D  ++   + HP      T ++ GS NGL+ L +    + ++NPSTR+   LP + I     SST    +YG GYD +SDDYK+VRMVQ   ++++     F  E KV+SL+ N W+RI+ V          +YH  + R +G LA N+LHW++ R P      L V FDL  EEF  +  P+   +    ++  I  + G +CL   Y ++    VDVW+MKEY V+ SW K+ + ++P  +       PL +SKD  +VL  +              VW+DL S+ +  + I+  PSS+   L V SLV
Sbjct:    1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHL-HRVLQTGDHLMILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS---YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNT---------KLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLV 368

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT4G12560.1 (| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413)

HSP 1 Score: 208.764 bits (530), Expect = 1.117e-63
Identity = 135/382 (35.34%), Postives = 204/382 (53.40%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSST----YYGFGYDPISDDYKLVRMVQSHGNNDE----YFHSEAKVYSLRSNCWRRIKDVC---------FYH-KFSREFGFLANNALHWMVFRTPESRNKEL-VGFDLGSEEFRFLELPDGCLDKV--LRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLV 361
            MA +P ++++DI  RL  K L+R R++SKP    I++P FI+ HL H +  T +H +IL       +SVD D  ++   + HP      T ++ GS NGL+ L +    + ++NPSTR+   LP + I     SST    +YG GYD +SDDYK+VRMVQ   ++++     F  E KV+SL+ N W+RI+ V          +YH  + R +G LA N+LHW++ R P      L V FDL  EEF  +  P+   +    ++  I  + G +CL   Y ++    VDVW+MKEY V+ SW K+ + ++P  +       PL +SKD  +VL  +              VW+DL S+ +  + I+  PSS+   L V SLV
Sbjct:    1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHL-HRVLQTGDHLMILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS---YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNT---------KLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLV 368

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT4G22390.1 (| Symbols: | F-box associated ubiquitination effector family protein | chr4:11813757-11815074 REVERSE LENGTH=402)

HSP 1 Score: 152.14 bits (383), Expect = 3.399e-42
Identity = 122/382 (31.94%), Postives = 178/382 (46.60%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSST----YYGFGYDPISDDYKLVRMVQ---SHGNNDEYFHSEAKVYSLRSNCWRRIKDVC------------FYHKFSRE-FGFLANNALHWMVFRTPESRN-KELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSSFDVSLYVDSLV 361
            MA  P ++I+++  RL    L++ R +SKP  S ID+P F+  HL   L+ T  H +IL        +V+ D  E    + HP      T ++ GS NG++ L +    + ++NPSTRK   LP   I F     T    +YG GYD + DD+K+VR+VQ     G        E KV+SL+ N W+R   VC            +YH   R  +G + NN LHW++ R         ++ +DL S++   L  P   L       I  + G +CL   Y E +   VDVW++KEY   +SW KL    +P  +       PL  SKD  ++L  I            + +W+DL SQ +    I    SSF   + V SLV
Sbjct:    1 MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLE-TGEHLMILLRGPRLLRTVELDSPENVSDIPHPLQAGGFT-EVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKR---VCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQE-LYIEDNMDIGVLDGCVCLM-CYDEYSH--VDVWVLKEYEDYKSWTKLYRVPKPESVESVEFIRPLICSKDRSKILLEINNA--------ANLMWFDLESQSLTTAGIE-CDSSFTADILVSSLV 364

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT3G06240.1 (| Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427)

HSP 1 Score: 145.976 bits (367), Expect = 8.404e-40
Identity = 120/412 (29.13%), Postives = 196/412 (47.57%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSL-----ILSH--------------------WEDYFFSVDYDLFETTQR---LNHPFGEQRKTL------------QILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFN----EIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHK-FSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFH---IKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSS--FDVSLYVDSLVPLNS 365
            LP E+I++IL RL  K + RFR VSK +C+   +P F K+HL   L+  +  SL     + SH                      +Y    D  +F    R    +H + ++R  L            +I+GS NGL+ +      +FL+NP+T  S+ LP N     + +   +   YGFG+D ++DDYKLV++V +  +       +A VYSL+++ WRRI ++ + H   S   G   N A+HW VF       + +V FD+ +EEFR + +PD   D   RF    + ++ G +C+ ++  + +D   D+W+M EYG  +SW ++        M       PL  +K+ +EVL  +              V Y+  +    ++ I G+  S  F+ + YV+SL+  NS
Sbjct:   36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSED-----ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHW-VFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHD---DIWVMSEYGEAKSWSRIRINLLYRSMK------PLCSTKNDEEVLLELD----------GDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLISPNS 422

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT3G23880.1 (| Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364)

HSP 1 Score: 97.8265 bits (242), Expect = 1.197e-22
Identity = 91/298 (30.54%), Postives = 132/298 (44.30%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLH---LSHSLKTTTNHS----LILSHWEDYFFSVDYDLFETTQRLNHPFGE--QRKTLQILGSCNGLLAL-VDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTY-YGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRR----IKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLIS 286
            LP EM+ +IL RL VK L RF+ V   W S I    F   H   L  S  TT+  S    +  S +      +      +T  ++   GE   R   Q++G+C+GL+   VD +  ++LWNP+ +  Q L  +++  S       YGFGYD   DDYK+V ++Q           E K+YS R   WR        V    K SR  G   N  L+W    +  S       +D+  +EF+ L  P  C        +  + G + +    +  N    DVW+MKE+G   SW KL+S
Sbjct:   14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQR----HQVKIETKIYSTRQKLWRSNTSFPSGVVVADK-SRS-GIYINGTLNWAATSSSSSWTIIS--YDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGAN---ADVWVMKEFGEVYSWSKLLS 300

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT3G16210.1 (| Symbols: | F-box family protein | chr3:5494533-5495615 REVERSE LENGTH=360)

HSP 1 Score: 95.1301 bits (235), Expect = 8.099e-22
Identity = 88/324 (27.16%), Postives = 150/324 (46.30%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFE--TTQRLNHPFGEQR-KTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCF--YHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIP-----LAFSKDGDEVLFFIGY 317
            LP E+  +IL RLS+KDL RFR V K W   I++P F + +   S       +  +S ++  F+ +D +      T +L+ P  +        +  C+G L +   N  + +WNP +++ +++P   I      S   GFGYDP+ DDYK+V  +      D    S A V+  R+  W     + +  +H   R   FL +  L+W+ +R+  S ++ ++ F+L + E+R L LP      V    +      +C+T       +I + V  M++ G   SW K+IS     F+             ++F++  D V+ F GY
Sbjct:    5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMS------PAKFVSFYDKNFYMLDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFKIVPNPGI---YQDSNILGFGYDPVHDDYKVVTFI------DRLDVSTAHVFEFRTGSWGESLRISYPDWHYRDRRGTFL-DQYLYWIAYRS--SADRFILCFNLSTHEYRKLPLP-VYNQGVTSSWLGVTSQKLCITEYEMCKKEIRISV--MEKTG---SWSKIISLSMSSFISVQDRIYDYQVEFVSFTRKNDLVVTFTGY 304

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT3G07870.1 (| Symbols: | F-box and associated interaction domains-containing protein | chr3:2510871-2512124 FORWARD LENGTH=417)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-21
Identity = 87/317 (27.44%), Postives = 136/317 (42.90%), Query Frame = 0

Query:    1 MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDN-------------PYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGLLALVDD--NDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHG---NND---------EYFHSEAKVYSLRSNC------WRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPD-GCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFK 283
            +  LP ++I+DI  RL +  + R   V + W S +               P  + LH    ++    H L LS  E             T++    F        ++GSCNGLL L D   ND ++L+NP T  S  LP     +       +GFG+  ++ +YK++++V   G   NN+         +Y  SE ++ +L S        WR +     Y    R    L N  LH++        +++ V FDL  EEF+ +  PD G L++     +   G   CL +     N   +D+W+MK YGVK+SW K
Sbjct:   25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLL-LHCDSPIRNGL-HFLDLSEEEKRI---------KTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHD-QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP-YKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKG---CLCAVVY-GNYGKLDIWVMKTYGVKESWGK 324

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT1G71320.1 (| Symbols: | F-box family protein | chr1:26882485-26883818 FORWARD LENGTH=392)

HSP 1 Score: 88.5817 bits (218), Expect = 2.248e-19
Identity = 91/334 (27.25%), Postives = 146/334 (43.71%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSL--ILSHW-----EDYFFSVDYDLFETTQRLNH----PFGE-QRKTLQILGSCNG--LLALVDDNDRIFLWNPSTRKSQVL-------PFNEIGFSSPS-----------------------STYYGFGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKF-----SREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWK 288
            +P ++   I   L +K L RF+ +SK W S I++ YF    L  +   T N     I  H+     E+Y  S+ + L ET  R +      F E Q KT+Q+LGSC+G  LL + DD   I+L NP+T++   L       PF  + + +P+                        +  GFG D +   YK+V +   +  +D  F  +AKV SL +   R   DV FY          +    AN +L W+  +     + +L+  DL +EEFR++ LP+          +  +   +CL+     +N +   VW + +    + W K+ S K
Sbjct:   14 IPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFSHKRLIRTGLPTPNMKFLHISQHFTANFVEEYSNSITF-LLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLVLLRIHDDFRSIYLINPTTKEHMKLSPEFMQWPFT-LSYLTPAMANKPWRQLSQSVLDYDISVKRMPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEF--KAKVLSLDNGEQR---DVGFYDIHHCIFCDEQTSVYANGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLPECDTKYATNIEMWNLNERLCLSDVLESSNLV---VWSLHQEYPTEKWEKIYSIK 337

[Close]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT1G50870.1 (| Symbols: | F-box and associated interaction domains-containing protein | chr1:18855147-18856337 FORWARD LENGTH=396)

HSP 1 Score: 83.9593 bits (206), Expect = 8.491e-18
Identity = 80/318 (25.16%), Postives = 137/318 (43.08%), Query Frame = 0

Query:    5 PHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLIL-SHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQI----------LGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYG----FGYDPISDDYKLVRMVQSHGNNDEYFHSEAKVYSLRS--NCWRRIKDVCFYHKFSREFGFLANNALHWMVF--RTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMGGDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAIPLA 303
            P ++I +IL RL VK +LRFR VSK W S+  +PYF     S+  +++T  SL++    +D  F   +       +  H + +   +  I            S +GL++       I +WNP+ R+  +LP        P  ++ G     GYDP+   +KL+ M      N +    E +V +L S    WRRIK    +    R +G   N  +++  +  +     N  ++ F++ SE+F  + LP G    +L   I   G   C+ +T  + N  +  +W +++              E +   C +   PLA
Sbjct:   32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTN---SYEARSSTRPSLLMFFKNKDKLFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPI-IWNPTMRQFLILP-------KPEKSWKGLSVFLGYDPVEGKHKLMCM------NRDNTSDECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTIMSFEVRSEKFDTITLPSGSFANML---IPYQGRLACVNNTMDDVNGGIT-LWTLED-------------AEKHIWSCKLFLAPLA 315

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BLAST of Ghir_A08G001990.1 vs. TAIR10
Match: AT4G38870.1 (| Symbols: | F-box and associated interaction domains-containing protein | chr4:18132583-18133863 REVERSE LENGTH=426)

HSP 1 Score: 80.4925 bits (197), Expect = 1.717e-16
Identity = 70/249 (28.11%), Postives = 119/249 (47.79%), Query Frame = 0

Query:    4 LPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLKTTTNHSLILSHWEDYFFSVDYDL-FETTQRLN-------------HPFGEQRKTLQILGSCNGLLALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYKLVRMVQSHG--NNDEYFHSEAKVYSL--RSNCWRRIKDVCFYHKFSREFGFLANNALHWMVFRTPESRNKELVGFDLGSEEFRFLELP 234
            LP ++I +IL +LS+K L+RF  VSK W S I +PYF+KL L+ SLK     SL+         S+   +  ++T+ ++             H     ++ + I  S +GL+     +  + ++NP TR+S  LP  + G  + +      GYDP+  +YK+V + +      N      E +V +L  R + WR I D+   H    E     N  L++  F   +     ++ FD+ SE+F  +++P
Sbjct:   53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRP--KSLVFVFRAQSLGSIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICYGPPSS-LVIYNPCTRRSITLPKIKAGRRAINQY---IGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSE-ELCINGVLYYRAFIGTKLNESAIMSFDVRSEKFDLIKVP 294

The following BLAST results are available for this feature:

BLAST of Ghir_A08G001990.1 vs. NCBI nr
BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
BLAST of Ghir_A08G001990.1 vs. TAIR10

BLAST of Ghir_A08G001990.1 vs. NCBI nr
Analysis Date: 2018-11-20 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs NCBI nr)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|1028938616\|ref\|XP_016712491.1\|	0.000e+0	100.00	PREDICTED: F-box protein CPR30-like [Gossypium hir...	[more]
gi\|823146268\|ref\|XP_012473023.1\|	0.000e+0	93.50	PREDICTED: F-box protein CPR30-like [Gossypium rai...	[more]
gi\|1344102267\|gb\|PPD76587.1\|	0.000e+0	93.50	hypothetical protein GOBAR_DD26488 [Gossypium barb...	[more]
gi\|1028938541\|ref\|XP_016712454.1\|	0.000e+0	88.24	PREDICTED: F-box protein CPR30-like [Gossypium hir...	[more]
gi\|823146272\|ref\|XP_012473025.1\|	0.000e+0	87.74	PREDICTED: F-box protein CPR30-like [Gossypium rai...	[more]
gi\|1347718203\|gb\|PPS14598.1\|	0.000e+0	85.27	hypothetical protein GOBAR_AA05977 [Gossypium barb...	[more]
gi\|1344102264\|gb\|PPD76584.1\|	0.000e+0	80.38	hypothetical protein GOBAR_DD26485 [Gossypium barb...	[more]
gi\|1028938628\|ref\|XP_016712498.1\|	0.000e+0	74.35	PREDICTED: F-box protein CPR30-like [Gossypium hir...	[more]
gi\|1050558851\|ref\|XP_017635998.1\|	0.000e+0	74.35	PREDICTED: F-box protein CPR30-like [Gossypium arb...	[more]
gi\|1028938543\|ref\|XP_016712455.1\|	0.000e+0	72.73	PREDICTED: F-box protein CPR30-like [Gossypium hir...	[more]

BLAST of Ghir_A08G001990.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CPR1_ARATH	1.541e-62	35.34	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702...	[more]
FB244_ARATH	4.691e-41	31.94	F-box protein At4g22390 OS=Arabidopsis thaliana OX...	[more]
FBK50_ARATH	1.160e-38	29.13	F-box/kelch-repeat protein At3g06240 OS=Arabidopsi...	[more]
FBK67_ARATH	1.652e-21	30.54	F-box/kelch-repeat protein At3g23880 OS=Arabidopsi...	[more]
FB115_ARATH	5.922e-21	28.27	F-box protein At2g21930 OS=Arabidopsis thaliana OX...	[more]
FB145_ARATH	1.118e-20	27.16	Putative F-box protein At3g16210 OS=Arabidopsis th...	[more]
FB135_ARATH	1.234e-19	27.44	F-box protein At3g07870 OS=Arabidopsis thaliana OX...	[more]
FB87_ARATH	3.102e-18	27.25	Putative F-box protein At1g71320 OS=Arabidopsis th...	[more]
FB52_ARATH	1.172e-16	25.16	Putative F-box protein At1g50870 OS=Arabidopsis th...	[more]
FB249_ARATH	2.369e-15	28.11	Putative F-box protein At4g38870 OS=Arabidopsis th...	[more]

BLAST of Ghir_A08G001990.1 vs. ExPASy TrEMBL
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A0A1U8LD08_GOSHI	0.000e+0	100.00	F-box protein CPR30-like OS=Gossypium hirsutum OX=...	[more]
A0A0D2P5G3_GOSRA	0.000e+0	93.50	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]
A0A1U8LH05_GOSHI	0.000e+0	88.24	F-box protein CPR30-like OS=Gossypium hirsutum OX=...	[more]
A0A0D2RS12_GOSRA	0.000e+0	87.74	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]
A0A1U8LGI8_GOSHI	0.000e+0	74.35	F-box protein CPR30-like OS=Gossypium hirsutum OX=...	[more]
A0A1U8LCZ2_GOSHI	0.000e+0	72.73	F-box protein CPR30-like OS=Gossypium hirsutum OX=...	[more]
A0A0D2QXR0_GOSRA	0.000e+0	72.24	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]
A0A0D2MSD7_GOSRA	1.602e-180	71.58	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]
A0A0D2RS05_GOSRA	6.421e-177	69.29	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]
A0A0D2RS17_GOSRA	1.327e-174	68.27	Uncharacterized protein OS=Gossypium raimondii OX=...	[more]

BLAST of Ghir_A08G001990.1 vs. TAIR10
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs arabidopsis TAIR10)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G12560.2	1.117e-63	35.34	\| Symbols: CPR30 \| F-box and associated interactio...	[more]
AT4G12560.1	1.117e-63	35.34	\| Symbols: CPR30 \| F-box and associated interactio...	[more]
AT4G22390.1	3.399e-42	31.94	\| Symbols: \| F-box associated ubiquitination effe...	[more]
AT3G06240.1	8.404e-40	29.13	\| Symbols: \| F-box family protein \| chr3:1887336-...	[more]
AT3G23880.1	1.197e-22	30.54	\| Symbols: \| F-box and associated interaction dom...	[more]
AT3G16210.1	8.099e-22	27.16	\| Symbols: \| F-box family protein \| chr3:5494533-...	[more]
AT3G07870.1	8.944e-21	27.44	\| Symbols: \| F-box and associated interaction dom...	[more]
AT1G71320.1	2.248e-19	27.25	\| Symbols: \| F-box family protein \| chr1:26882485...	[more]
AT1G50870.1	8.491e-18	25.16	\| Symbols: \| F-box and associated interaction dom...	[more]
AT4G38870.1	1.717e-16	28.11	\| Symbols: \| F-box and associated interaction dom...	[more]

InterPro

Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium hirsutum proteins
Date Performed: 2018-11-09


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 211..283 e-value: 1.4E-4 score: 21.7
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..71 e-value: 1.4E-6 score: 30.2
None	No IPR available	PANTHER	PTHR44355:SF1	SUBFAMILY NOT NAMED	coord: 2..367
None	No IPR available	PANTHER	PTHR44355	FAMILY NOT NAMED	coord: 2..367
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..41 e-value: 3.3E-8 score: 33.1
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..43 score: 11.723
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 96..310 e-value: 2.7E-32 score: 109.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..71

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ghir_A08:1803069..1805935+
coding sequence from alignment at Ghir_A08:1803069..1805935+

mRNA sequence

>Ghir_A08G001990.1_HAU-AD1_v1.0 ID=Ghir_A08G001990.1_HAU-AD1_v1.0; Name=Ghir_A08G001990.1; organism=Gossypium hirsutum; type=mRNA; length=1328bp
CTTTGCTTACTGTTGGCCATCTGAAAACCCTAACAATGGCCAGACTCCCA
CATGAAATGATCAGTGATATACTATGTCGGTTAAGTGTAAAAGATCTTCT
ACGCTTCAGGAGCGTTTCAAAGCCATGGTGCTCTTCCATCGACAACCCAT
ATTTCATCAAACTCCACCTCTCCCATTCGCTCAAAACCACTACCAATCAC
TCTCTTATTCTCAGTCACTGGGAGGACTACTTCTTCTCCGTCGACTACGA
CCTATTCGAAACTACCCAAAGACTCAACCACCCATTCGGTGAACAAAGAA
AAACCCTTCAAATATTGGGTTCTTGCAATGGTTTGCTGGCTCTAGTAGAC
GACAATGATAGAATATTTCTATGGAACCCTTCAACAAGAAAATCCCAGGT
ATTACCTTTCAATGAAATAGGGTTCTCATCTCCATCTTCAACTTATTATG
GATTTGGGTACGATCCCATTTCTGATGACTACAAATTGGTTCGAATGGTC
CAATCACATGGAAACAATGATGAATATTTTCATTCGGAAGCTAAGGTTTA
CAGCTTGAGGAGCAATTGTTGGAGAAGGATTAAGGATGTCTGCTTTTATC
ATAAATTCAGTCGAGAATTTGGGTTTTTGGCTAACAACGCTTTACATTGG
ATGGTTTTTAGAACTCCTGAATCGCGTAATAAAGAGCTTGTTGGTTTTGA
TCTGGGGAGCGAGGAATTCCGTTTCCTTGAATTACCGGATGGTTGTTTAG
ATAAGGTTTTAAGGTTTCACATAAAAGCCATGGGGGGTGACATTTGTTTG
ACTTCAACTTATAGGGAAACCAATGATATTGTGGTTGATGTATGGATAAT
GAAGGAATATGGGGTTAAACAATCTTGGTTTAAATTGATATCATGGAAGG
AACCCTACTTTATGCCATGTTCTATAGTTGCAATACCTTTGGCTTTCTCA
AAAGATGGTGACGAAGTTTTATTCTTCATTGGATACAAGTGGTTTAATTG
GGGCAGATGGATCGACAGTTTTGTGTGGTATGATTTGGGAAGCCAAGTGG
TTGAGGATGTTGTGATTAGAGGTATTCCATCTTCATTTGATGTGAGCTTG
TATGTTGACAGCCTTGTTCCTCTCAATAGTAATGCTCAACAGTGAGATGC
CTCCAGAGGGATGATTTTTTGTCCAAGAAGCTTCACTTGGTGCTATAATT
AGAGAAAGGATATGAGATAATTTAATGTTAAACGAAGTTTGTTTCTTGAT
TACTTTAAATACAAGTATTTCAATTTATTTTTATGTATTGGAGACTCGTA
TCATTATATTTGTATTTGGATATGGTTG

protein sequence of Ghir_A08G001990.1_HAU-AD1_v1.0

>Ghir_A08G001990.1_HAU-AD1_v1.0 ID=Ghir_A08G001990.1_HAU-AD1_v1.0; Name=Ghir_A08G001990.1_HAU-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=369bp
MARLPHEMISDILCRLSVKDLLRFRSVSKPWCSSIDNPYFIKLHLSHSLK
TTTNHSLILSHWEDYFFSVDYDLFETTQRLNHPFGEQRKTLQILGSCNGL
LALVDDNDRIFLWNPSTRKSQVLPFNEIGFSSPSSTYYGFGYDPISDDYK
LVRMVQSHGNNDEYFHSEAKVYSLRSNCWRRIKDVCFYHKFSREFGFLAN
NALHWMVFRTPESRNKELVGFDLGSEEFRFLELPDGCLDKVLRFHIKAMG
GDICLTSTYRETNDIVVDVWIMKEYGVKQSWFKLISWKEPYFMPCSIVAI
PLAFSKDGDEVLFFIGYKWFNWGRWIDSFVWYDLGSQVVEDVVIRGIPSS
FDVSLYVDSLVPLNSNAQQ

mRNA from alignment at Ghir_A08:1803069..1805935+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ghir_A08G001990.1_HAU-AD1_v1.0 ID=Ghir_A08G001990.1_HAU-AD1_v1.0; Name=Ghir_A08G001990.1; organism=Gossypium hirsutum; type=mRNA; length=2867bp; location=Sequence derived from: Ghir_A08:1803069..1805935+ (Gossypium hirsutum
CTTTGCTTACTGTTGGCCATCTGAAAACCCTAACAATGGCCAGACTCCCA
CATGAAATGATCAGTGATATACTATGTCGGTTAAGTGTAAAAGATCTTCT
ACGCTTCAGGAGCGTTTCAAAGCCATGGTGCTCTTCCATCGACAACCCAT
ATTTCATCAAACTCCACCTCTCCCATTCGCTCAAAACCACTACCAATCAC
TCTCTTATTCTCAGTCACTGGGAGGACTACTTCTTCTCCGTCGACTACGA
CCTATTCGAAACTACCCAAAGACTCAACCACCCATTCGGTGAACAAAGAA
AAACCCTTCAAATATTGGGTTCTTGCAATGGTTTGCTGGCTCTAGTAGAC
GACAATGATAGAATATTTCTATGGAACCCTTCAACAAGAAAATCCCAGGT
ATTACCTTTCAATGAAATAGGGTTCTCATCTCCATCTTCAACTTATTATG
GATTTGGGTACGATCCCATTTCTGATGACTACAAATTGGTTCGAATGGTC
CAATCACATGGAAACAATGATGAATATTTTCATTCGGAAGCTAAGGTTTA
CAGCTTGAGGAGCAATTGTTGGAGAAGGATTAAGGATGTCTGCTTTTATC
ATAAATTCAGTCGAGAATTTGGGTTTTTGGCTAACAACGCTTTACATTGG
ATGGTTTTTAGAACTCCTGAATCGCGTAATAAAGAGCTTGTTGGTTTTGA
TCTGGGGAGCGAGGAATTCCGTTTCCTTGAATTACCGGATGGTTGTTTAG
ATAAGGTTTTAAGGTTTCACATAAAAGCCATGGGGGGTGACATTTGTTTG
ACTTCAACTTATAGGGAAACCAATGATATTGTGGTTGATGTATGGATAAT
GAAGGAATATGGGGTTAAACAATCTTGGTTTAAATTGATATCATGGAAGG
AACCCTACTTTATGCCATGTTCTATAGTTGCAATACCTTTGGCTTTCTCA
AAAGATGGTGACGAAGTTTTATTCTTCATTGGATACAAGTGGTTTAATTG
GGGCAGATGGATCGACAGTTTTGTGTGGTATGATTTGGGAAGCCAAGTGG
TTGAGGATGTTGTGATTAGAGGTATTCCATCTTCATTTGATGTGAGCTTG
TATGTTGACAGCCTTGTTCCTCTCAATAGTAATGCTCAACAGTGAGATGC
CTCCAGAGGTAAATTTTCTTTATTTAACTGCATTTTTTATGCTCATGGAT
TTGCACTTGTATGCTGCAACTTGAATTTCCAAAAATATTATTGGTTTTTA
TGTTATTAGGCAACATTTAACTAGTTTGTCGATTTAATTGGTTTGTATTT
GTTTGTGAGTCAATTGGTCTAATATCTCTCATTGAATCGATACCCTAAAC
ATTAATTTAATTTCTTTCATTTATGCAAATATGTGTTGCATTTCACTTTA
TATGTTGCGATATGAATTTCCATTAATATTGGGTTTTTCTATGTTAGGGA
TGATTTTTTGTCCAAGAAGCTCCACTTGGTGTTATAATTAGTGAAAGGAT
ATGAGATAATTAAATGTTAAACAAAGTTTATTTCTTGATTACTTTAAATA
CAAGTATTTTCAATTTATATTAGTATTGGAGACTCGTATCATTATATTTA
TATTTGGATATGGTTGTAATTAATTTCAATTAATGAAAGAATTGATTTGG
TTTGATTTGAATCAAAGTTTATGTATTATTTTAATATTTATTCCTAATTA
AAGTTGCTTGGAATTTGGATAATTTGTATATTTTTTTCATTTGAGTTGTG
TGGTTGATATCTAATCAGCAAAAGGGTTGAATATGTTATGATCGGAGGTT
TTCTATGGTGTTTTGAAGTGGAAAGGTTGGTTGAGGCCCCTATTGGTCCT
CTTAATCTTAGGCATCGTTTTTTGTTAAGTTATAAGTTTATTTTTCGATT
ATCTTGTGAGTATCATAGATGGATATATATATTTTTAATTATATTTAATT
GCATTTTGTTGTTTCTCATATGGATTTGCATTATATTTCTATAGTGCAAT
TTTTATTGGCAATGTTCTCAAAATCGAGTTAATAGTTAAACTGGTCATGC
CATCGATTCGATAAAATAAATAATTAAAAGATATCATAAAAATCAATTCA
ATTAGTTTTCCAATTCAATTGGTCTGTTAGTTTGTGAGTCAATCGATCTA
GTATCTCTCCTTGAATAGATATCTTGGTTTGTTTAGGTTCAAACAAACAT
ATTGTTAAAAAATCATAGGAGTATTTTCACTTGATTAACTGATATCAATA
TTTTCAATTTATGTTTTTTTTTGTATGTATGTATTTAGAGGAACATGCCA
CTATATTTATATTTGGATGTGCTAGAGAAGCCCGAGCTAATCCTAAACCC
TAGAAATTAATTTAATTGCATTCTTTTATGTCCATTTCTCTTTATATGTT
GCAATATGAATTCCCATTTATATTGGTTTTTCTATGTTGTTAGGGATGAT
TTCTTCTAGAAGCATTTTTATATGATTTTCTCATTTCTATTATTTTTTAT
GCAATTTGTATCGTAGCATATATATATAATTATAATTTAAAAAATTTATA
GGAATAGATAAGTAATAACATCAAAAAATCGATACCTTGAAATTTAATTT
AATTTAATTTCTTTCATTTATGCAAATATGTGTTGCATTTGTCTTTGTAT
ATTTCGATATGAATTTCCATTGATATTGGGTTTTTCTATGTTGTTAGGGA
TGATTTTTTGTCCAAGAAGCTTCACTTGGTGCTATAATTAGAGAAAGGAT
ATGAGATAATTTAATGTTAAACGAAGTTTGTTTCTTGATTACTTTAAATA
CAAGTATTTCAATTTATTTTTATGTATTGGAGACTCGTATCATTATATTT
GTATTTGGATATGGTTG

Coding sequence (CDS) from alignment at Ghir_A08:1803069..1805935+

>Ghir_A08G001990.1_HAU-AD1_v1.0 ID=Ghir_A08G001990.1_HAU-AD1_v1.0; Name=Ghir_A08G001990.1; organism=Gossypium hirsutum; type=CDS; length=1110bp; location=Sequence derived from: Ghir_A08:1803069..1805935+ (Gossypium hirsutum
ATGGCCAGACTCCCACATGAAATGATCAGTGATATACTATGTCGGTTAAG
TGTAAAAGATCTTCTACGCTTCAGGAGCGTTTCAAAGCCATGGTGCTCTT
CCATCGACAACCCATATTTCATCAAACTCCACCTCTCCCATTCGCTCAAA
ACCACTACCAATCACTCTCTTATTCTCAGTCACTGGGAGGACTACTTCTT
CTCCGTCGACTACGACCTATTCGAAACTACCCAAAGACTCAACCACCCAT
TCGGTGAACAAAGAAAAACCCTTCAAATATTGGGTTCTTGCAATGGTTTG
CTGGCTCTAGTAGACGACAATGATAGAATATTTCTATGGAACCCTTCAAC
AAGAAAATCCCAGGTATTACCTTTCAATGAAATAGGGTTCTCATCTCCAT
CTTCAACTTATTATGGATTTGGGTACGATCCCATTTCTGATGACTACAAA
TTGGTTCGAATGGTCCAATCACATGGAAACAATGATGAATATTTTCATTC
GGAAGCTAAGGTTTACAGCTTGAGGAGCAATTGTTGGAGAAGGATTAAGG
ATGTCTGCTTTTATCATAAATTCAGTCGAGAATTTGGGTTTTTGGCTAAC
AACGCTTTACATTGGATGGTTTTTAGAACTCCTGAATCGCGTAATAAAGA
GCTTGTTGGTTTTGATCTGGGGAGCGAGGAATTCCGTTTCCTTGAATTAC
CGGATGGTTGTTTAGATAAGGTTTTAAGGTTTCACATAAAAGCCATGGGG
GGTGACATTTGTTTGACTTCAACTTATAGGGAAACCAATGATATTGTGGT
TGATGTATGGATAATGAAGGAATATGGGGTTAAACAATCTTGGTTTAAAT
TGATATCATGGAAGGAACCCTACTTTATGCCATGTTCTATAGTTGCAATA
CCTTTGGCTTTCTCAAAAGATGGTGACGAAGTTTTATTCTTCATTGGATA
CAAGTGGTTTAATTGGGGCAGATGGATCGACAGTTTTGTGTGGTATGATT
TGGGAAGCCAAGTGGTTGAGGATGTTGTGATTAGAGGTATTCCATCTTCA
TTTGATGTGAGCTTGTATGTTGACAGCCTTGTTCCTCTCAATAGTAATGC
TCAACAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013187	F-box-assoc_dom_typ3
IPR001810	F-box_dom
IPR017451	F-box-assoc_interact_dom
IPR036047	F-box-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

Ghir_A08G001990.1_HAU-AD1_v1.0, Ghir_A08G001990.1_HAU-AD1_v1.0 (mRNA) Gossypium hirsutum