Ghir_A11G011270.1_HAU-AD1_v1.0, Ghir_A11G011270.1_HAU-AD1_v1.0 (mRNA) Gossypium hirsutum

Transcript Overview
NameGhir_A11G011270.1
Unique NameGhir_A11G011270.1_HAU-AD1_v1.0
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length861
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ghir_A11chromosomeGhir_A11:10849377..10850717 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
abghL2596Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
ghhnR0282Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhnR0370Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhnR0421Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghhnR0485Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghghR0248Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghghR0310Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
bhghL0307Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhghL3020Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhghL4050Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbghL0195Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbghL0346Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbghL1782Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbghL1931Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghrjR0171Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghrjR0245Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghrjR0282Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghrbR0291Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghrbR0307Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghrbR0379Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghhjR0275Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghhjR0351Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghhjR0396Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghhbR0369Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghhbR0400Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghhbR0442Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghhbR0511Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
acghL0315Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
acghL0480Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
ghhzR0253Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghhzR0321Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghhzR0365Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghhzR0415Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
bzghL0203Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzghL0348Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzghL1730Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzghL1876Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
ghgkR0207Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghgkR0286Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghgkR0315Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghgtbR0212Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghgtbR0262Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghgtbR0332Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghgrbR0227Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghgrbR0245Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghgrbR0307Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghghzR0232Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghghzR0321Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghghzR0376Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghghtR0250Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghghtR0319Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghghtR0361Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gaughL0182Gossypium australe (G2) genome CRI_v1.1Gossypium australe
gaughL0319Gossypium australe (G2) genome CRI_v1.1Gossypium australe
adghL0205Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghL0365Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghL1762Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghL1920Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
ghhgsR0226Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghhgsR0287Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghhgsR0318Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghhgsR0355Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghhgsR0373Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghtoR0201Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghtoR0282Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghtoR0324Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdghL0197Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghL0366Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghL1769Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghL1930Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
fnghL0217Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
fnghL0379Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dtghL0170Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dtghL0408Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
ghhwR0231Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghhwR0276Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghhwR0333Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
awghL0213Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awghL0371Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ghtwR0275Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghtwR0384Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghtwR0420Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghuhR0205Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghuhR0231Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghuhR0255Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghuhR0286Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghuhR0337Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
d3dghL1236Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
ghgtiR0227Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghgtiR0334Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghgtiR0378Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
dsighL241Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
ghndmR0263Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghndmR0327Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghndmR0367Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghndmR0424Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barghL0192Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghL0337Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghL1570Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghL1694Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbghL0188Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghL0316Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghL1552Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghL1685Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
ghjmbR0273Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghjmbR0299Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghjmbR0343Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghjmbR0386Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghjmbR0438Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghpscR0260Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghpscR0286Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghpscR0329Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghpscR0368Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyghL0212Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghL0360Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghL1676Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghL1824Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
ghhpfR0261Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghhpfR0323Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghhpfR0364Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghhpfR0421Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
GB_A11G1102Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gene-EPI10_025359-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
EVM_prediction_Ga11G2952Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Cotton_D_gene_10035778Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gbar_A11G010950.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
EVM0017992.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gene-E1A91_D11G118100v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gbscaffold12094.13.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Ghe11G12030Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
rna-gnl|WGS_VKGI|Godar.D11G121000.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Gbscaffold3970.6.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
rna-gnl|WGS:JABEZY|Gogos_00004414-RAGossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
Gbar_D11G011460.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Gothu.00017633-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
GB_D11G1129Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
D5.v1.pred_00007680-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
mikado.F11G3264.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
Kirkii_Juiced.00g297910.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
Gorai.007G117100.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS_VKGE|Gotom.A11G118300.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gene-E1A91_A11G116100v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gar11G11550Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
rna-gnl|WGS:VKDL|Gobar.A11G112600.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
TURN.01g307270.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
rna-gnl|WGS_VKGE|Gotom.D11G118900.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS_VKGI|Godar.A11G120200.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Cotton_A_15692Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Gohir.D11G109500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
CotAD_39104Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
genemark-Dt_11-g-64.757-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
mk-At_11-augustus-gene-113.182-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghi_A11G05701Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Gh_A11G0953Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gohir.A11G104700.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GhirPA1101T112500.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhirPD1101T113600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhM_A11G1225.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Ghir_D11G011230.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
GhM_D11G1229.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
D11G11520.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GH_A11G01084_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GH_D11G1119Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
maker-At_11-aug-g-113.182-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
A11G11430.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GH_D11G01118_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
CotAD_32804Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Gohir.A11G104700.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gohir.D11G109500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Gh_A11G112000.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghi_D11G05976Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Gh_D11G112900.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghicr24_A11G113000.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Ghicr24_D11G110500.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
maker-Dt_11_GB713-augustus-gene-9.165-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
genemark-Dt_11-proG-64.757-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
genemark-At_11_GB713-gene-113.232-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GH_A11G1090Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gh_D11G1098Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ghir_A11G011270Ghir_A11G011270_HAU-AD1_v1.0Gossypium hirsutumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ghir_A11G011270.1_HAU-AD1_v1.0Ghir_A11G011270.1_HAU-AD1_v1.0Gossypium hirsutumpolypeptide
Ghir_A11G011270.1Ghir_A11G011270.1_HAU-AD1_v1.0-proteinGossypium hirsutumpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghir_A11G011270.1.utr5p1Ghir_A11G011270.1.utr5p1_HAU-AD1_v1.0Gossypium hirsutumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghir_A11G011270.1.exon1Ghir_A11G011270.1.exon1_HAU-AD1_v1.0Gossypium hirsutumexon
Ghir_A11G011270.1.exon2Ghir_A11G011270.1.exon2_HAU-AD1_v1.0Gossypium hirsutumexon
Ghir_A11G011270.1.exon3Ghir_A11G011270.1.exon3_HAU-AD1_v1.0Gossypium hirsutumexon
Ghir_A11G011270.1.exon4Ghir_A11G011270.1.exon4_HAU-AD1_v1.0Gossypium hirsutumexon
Ghir_A11G011270.1.exon5Ghir_A11G011270.1.exon5_HAU-AD1_v1.0Gossypium hirsutumexon
Ghir_A11G011270.1.exon6Ghir_A11G011270.1.exon6_HAU-AD1_v1.0Gossypium hirsutumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Ghir_A11G011270.1cds.Ghir_A11G011270.1_HAU-AD1_v1.0Gossypium hirsutumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghir_A11G011270.1.utr3p1Ghir_A11G011270.1.utr3p1_HAU-AD1_v1.0Gossypium hirsutumthree_prime_UTR


Homology
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1029099902|ref|XP_016709303.1| (PREDICTED: uncharacterized protein LOC107923626 [Gossypium hirsutum] >gi|1347711147|gb|PPS08530.1| hypothetical protein GOBAR_AA12106 [Gossypium barbadense])

HSP 1 Score: 344.354 bits (882), Expect = 7.132e-120
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|823187658|ref|XP_012490257.1| (PREDICTED: uncharacterized protein LOC105802895 [Gossypium raimondii] >gi|1029071136|ref|XP_016695814.1| PREDICTED: uncharacterized protein LOC107912243 [Gossypium hirsutum] >gi|763774606|gb|KJB41729.1| hypothetical protein B456_007G117100 [Gossypium raimondii])

HSP 1 Score: 339.347 bits (869), Expect = 9.174e-118
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVL+SIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIID+GSTAQSPFVR QAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLKSIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDEGSTAQSPFVRLQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1050614195|ref|XP_017629874.1| (PREDICTED: uncharacterized protein LOC108472826 [Gossypium arboreum])

HSP 1 Score: 337.806 bits (865), Expect = 3.365e-117
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDG+TAQSPFVR QAILLAADCNPKWLTKHLPTLAKSRKV LIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGTTAQSPFVRLQAILLAADCNPKWLTKHLPTLAKSRKVRLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1269965884|ref|XP_022733256.1| (uncharacterized protein LOC111287187 isoform X1 [Durio zibethinus])

HSP 1 Score: 294.664 bits (753), Expect = 4.161e-100
Identity = 141/169 (83.43%), Postives = 158/169 (93.49%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            M  RNKAAKNNI DG++PQQQDCYEGERL+HVL+SI+RG+ESARALA NSLPEKVWLKQQFAIGVNDVTRVLERMA  +++GS+AQSP VR QAILLAADCNPKWL KHLPTLA SRKVPL+IV+DDKKGSLRLGELVKLKTA+AIGVKARG+AINQI++E+LDGDE N
Sbjct:    1 MTARNKAAKNNILDGSVPQQQDCYEGERLVHVLKSIQRGVESARALAENSLPEKVWLKQQFAIGVNDVTRVLERMAPTVENGSSAQSPCVRLQAILLAADCNPKWLIKHLPTLALSRKVPLMIVRDDKKGSLRLGELVKLKTAIAIGVKARGNAINQIIQELLDGDEVN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1269967581|ref|XP_022734148.1| (uncharacterized protein LOC111287738 isoform X1 [Durio zibethinus])

HSP 1 Score: 294.278 bits (752), Expect = 7.200e-100
Identity = 141/169 (83.43%), Postives = 159/169 (94.08%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            M  RNKAAKNNI DG++PQQQDCYEGERL+HVL+SI+RG+ESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMA  +++GS+AQSP VR QAILLAADC+PKWL KHLPTLA SRKVPL+IV+DDKKGSLRLGELVKLKTA+AIGVKARG+AINQI++E+LDGDE N
Sbjct:    1 MTARNKAAKNNILDGSVPQQQDCYEGERLVHVLKSIQRGVESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAPGVENGSSAQSPCVRLQAILLAADCSPKWLIKHLPTLALSRKVPLMIVRDDKKGSLRLGELVKLKTAIAIGVKARGNAINQIIQELLDGDEVN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1269967589|ref|XP_022734153.1| (uncharacterized protein LOC111287739 isoform X1 [Durio zibethinus])

HSP 1 Score: 290.812 bits (743), Expect = 1.830e-98
Identity = 140/169 (82.84%), Postives = 158/169 (93.49%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            M  RNKAAKNNI DG++PQQQDCYEGERL+HVL+SI+RG+ESARALA NSLPEKVWLKQQFAIGVNDVTRVLERMA  +++GS+AQSP VR QAILLAADC+PKWL KHLPTLA SRKVPL+IV+DDKKGSLRLGELVKLKTA+AIGVKARG+AINQI++E+LDGDE N
Sbjct:    1 MKARNKAAKNNIVDGSVPQQQDCYEGERLVHVLKSIQRGVESARALAENSLPEKVWLKQQFAIGVNDVTRVLERMAPGVENGSSAQSPCVRLQAILLAADCSPKWLIKHLPTLALSRKVPLMIVRDDKKGSLRLGELVKLKTAIAIGVKARGNAINQIIQELLDGDEVN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1269917805|ref|XP_022770725.1| (uncharacterized protein LOC111314023 [Durio zibethinus])

HSP 1 Score: 288.5 bits (737), Expect = 1.051e-97
Identity = 138/169 (81.66%), Postives = 154/169 (91.12%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKAAKN+I DG++PQQ+DCY+GERL+H+L+SIRRGIESAR L GNSLPEK+WLKQQF++GVNDVTRVLERMA   + GS+AQSP VR QAILLAADCNPKWLTKHLPTLA SRKVPLI VKDD KGSLRLGELV+LKTA+AIGVKAR +AINQIMEEILDGDE N
Sbjct:    1 MPTRNKAAKNSILDGSVPQQKDCYDGERLVHMLKSIRRGIESARILGGNSLPEKIWLKQQFSVGVNDVTRVLERMAPSAEKGSSAQSPCVRLQAILLAADCNPKWLTKHLPTLASSRKVPLITVKDDGKGSLRLGELVRLKTAIAIGVKARENAINQIMEEILDGDEVN 169
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|508703562|gb|EOX95458.1| (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative [Theobroma cacao])

HSP 1 Score: 282.722 bits (722), Expect = 2.512e-95
Identity = 140/169 (82.84%), Postives = 153/169 (90.53%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKAAKN I DG+LPQQ DCYEGERL+ VL+SI+RG+ESAR LAGNS PEK+WLKQQFAIGVNDVTRVLERMA I D GS+AQ+P VR QAILLAADCNP+WLTKHLPTLA SRKVPLI VKD+KKGSLRLGELVKLKTA+AIGVKARG+AINQI+EEILDG E N
Sbjct:    1 MPIRNKAAKN-IVDGSLPQQPDCYEGERLVRVLKSIQRGVESARELAGNSFPEKIWLKQQFAIGVNDVTRVLERMAPIADKGSSAQAPCVRLQAILLAADCNPRWLTKHLPTLASSRKVPLIFVKDNKKGSLRLGELVKLKTAIAIGVKARGNAINQIIEEILDGGEVN 168
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1063461314|ref|XP_007051301.2| (PREDICTED: uncharacterized protein LOC18613811 [Theobroma cacao])

HSP 1 Score: 280.796 bits (717), Expect = 1.345e-94
Identity = 139/169 (82.25%), Postives = 152/169 (89.94%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKAAKN I DG+LPQQ DCYEGERL+ VL+SI+RG+ESAR LAGNS PEK+WLKQQFAIGVNDVTRVLERMA I D GS+AQ+P VR QAILLAADCNP+WLTKHLPTLA SRKVPLI VKD+KKGSLRLGELVKLKTA+ IGVKARG+AINQI+EEILDG E N
Sbjct:    1 MPIRNKAAKN-IVDGSLPQQPDCYEGERLVRVLKSIQRGVESARELAGNSFPEKIWLKQQFAIGVNDVTRVLERMAPIADKGSSAQAPCVRLQAILLAADCNPRWLTKHLPTLASSRKVPLIFVKDNKKGSLRLGELVKLKTAIVIGVKARGNAINQIIEEILDGGEVN 168
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BLAST of Ghir_A11G011270.1 vs. NCBI nr
Match: gi|1269965886|ref|XP_022733257.1| (uncharacterized protein LOC111287187 isoform X2 [Durio zibethinus])

HSP 1 Score: 280.026 bits (715), Expect = 2.217e-94
Identity = 137/169 (81.07%), Postives = 154/169 (91.12%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            M  RNKAAKNNI DG++PQQQDCYEGERL+HVL+SI+RG+ESARALA NSLPEK    QQFAIGVNDVTRVLERMA  +++GS+AQSP VR QAILLAADCNPKWL KHLPTLA SRKVPL+IV+DDKKGSLRLGELVKLKTA+AIGVKARG+AINQI++E+LDGDE N
Sbjct:    1 MTARNKAAKNNILDGSVPQQQDCYEGERLVHVLKSIQRGVESARALAENSLPEK----QQFAIGVNDVTRVLERMAPTVENGSSAQSPCVRLQAILLAADCNPKWLIKHLPTLALSRKVPLMIVRDDKKGSLRLGELVKLKTAIAIGVKARGNAINQIIQELLDGDEVN 165
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BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A1U8L7D9_GOSHI (uncharacterized protein LOC107923626 OS=Gossypium hirsutum OX=3635 GN=LOC107923626 PE=4 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.031e-120
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
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BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A0D2SBS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G117100 PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 6.472e-118
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVL+SIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIID+GSTAQSPFVR QAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLKSIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDEGSTAQSPFVRLQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
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BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A1U8K5B0_GOSHI (uncharacterized protein LOC107912243 OS=Gossypium hirsutum OX=3635 GN=LOC107912243 PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 6.472e-118
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVL+SIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIID+GSTAQSPFVR QAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN
Sbjct:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLKSIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDEGSTAQSPFVRLQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A061DZK2_THECC (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_004947 PE=4 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.772e-95
Identity = 140/169 (82.84%), Postives = 153/169 (90.53%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKAAKN I DG+LPQQ DCYEGERL+ VL+SI+RG+ESAR LAGNS PEK+WLKQQFAIGVNDVTRVLERMA I D GS+AQ+P VR QAILLAADCNP+WLTKHLPTLA SRKVPLI VKD+KKGSLRLGELVKLKTA+AIGVKARG+AINQI+EEILDG E N
Sbjct:    1 MPIRNKAAKN-IVDGSLPQQPDCYEGERLVRVLKSIQRGVESARELAGNSFPEKIWLKQQFAIGVNDVTRVLERMAPIADKGSSAQAPCVRLQAILLAADCNPRWLTKHLPTLASSRKVPLIFVKDNKKGSLRLGELVKLKTAIAIGVKARGNAINQIIEEILDGGEVN 168
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A1R3H1L8_COCAP (Ribosomal protein L7Ae/L30e/S12e/Gadd45 OS=Corchorus capsularis OX=210143 GN=CCACVL1_22026 PE=4 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 4.356e-92
Identity = 133/167 (79.64%), Postives = 148/167 (88.62%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDE 167
            MP RNKAAKNN+ D ++ +QQDCYEGERL+ VL SIRRGIESAR LAGNSLPEK+WLKQQFAIGVNDVTRVLERMA I D  S+AQ+P VR QA+LLA DCNPKWLTKHLP+LA SRKVPLI VKDDK+GSLRLGELV LKTA+AIGVKARG+AINQ ++EIL GDE
Sbjct:    1 MPARNKAAKNNVVDCSVLRQQDCYEGERLVDVLNSIRRGIESARLLAGNSLPEKIWLKQQFAIGVNDVTRVLERMAPIADKRSSAQAPCVRLQAVLLAGDCNPKWLTKHLPSLASSRKVPLIFVKDDKRGSLRLGELVNLKTAIAIGVKARGNAINQKLDEILGGDE 167
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A1R3IIE1_9ROSI (Ribosomal protein L7Ae/L30e/S12e/Gadd45 OS=Corchorus olitorius OX=93759 GN=COLO4_23128 PE=4 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.859e-92
Identity = 132/169 (78.11%), Postives = 149/169 (88.17%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKAAKNN+ D ++ +QQDCYEGERL+ VL SIRRGIESAR LAGNSLPEK+WLKQQFAIGVNDVTRVLERMA+I D  S+AQ+P VR QA+LLA DCNPKWLTKHLP+LA SRKVPLI V+DDK+GSLRLGELV LKTA+AIGVKARG+AINQ ++EIL  DE N
Sbjct:    1 MPARNKAAKNNVVDCSVLRQQDCYEGERLVDVLNSIRRGIESARLLAGNSLPEKIWLKQQFAIGVNDVTRVLERMASIADKRSSAQAPCVRLQAVLLAGDCNPKWLTKHLPSLASSRKVPLIFVRDDKRGSLRLGELVNLKTAIAIGVKARGNAINQKLDEILGDDEEN 169
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A2I4FMN2_9ROSI (uncharacterized protein LOC109000492 OS=Juglans regia OX=51240 GN=LOC109000492 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 5.687e-69
Identity = 112/184 (60.87%), Postives = 133/184 (72.28%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQ----DGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDD-GSTAQSPF----------VRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP R KA+K +          PQ QDCYEGERL  +L+SIRR  E+ R L GNSLPEK+W KQQF+IGVNDVTRVLERMA +I   GS    P            + QA+LLA+DCNP+WLTKHLP+LA SR+VPLI VKD K GSLRLGELVKL+TA+AIGVKA+G+AIN++  +ILD DE N
Sbjct:    1 MPRRKKASKKHTDISKASSVPPQNQDCYEGERLASLLKSIRRETETTRLLDGNSLPEKIWFKQQFSIGVNDVTRVLERMAPLIPQVGSYPAQPHSISSNRKVSSFQLQAVLLASDCNPRWLTKHLPSLASSRRVPLIYVKDKKGGSLRLGELVKLRTAIAIGVKAKGNAINELFGKILDEDEIN 184
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A251PT09_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G002600 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.389e-67
Identity = 104/172 (60.47%), Postives = 134/172 (77.91%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIID------DGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGD 166
            MPPRNK +K  I + +  Q QDCYEGERL  + +SI+R IESAR L  N LPEK+W KQQFAIGVN+VTRVLERM  +          +  ++P++  QA+L+A+DCNP+WL+KHLP+LA SRKVPLI +KD+K  SLRLG+LV+LKTA+AIGVKA+G+AINQ++EEIL G+
Sbjct:    1 MPPRNKDSKGRIINASKSQDQDCYEGERLDRLFQSIQRKIESAR-LDSNCLPEKMWFKQQFAIGVNEVTRVLERMPPVTPMVAPSLASNRTKAPYIGLQAVLIASDCNPRWLSKHLPSLALSRKVPLIFLKDNKGASLRLGQLVQLKTAIAIGVKAKGNAINQLIEEILRGN 171
[Close]
BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A2C9VS67_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G008900 PE=4 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 9.910e-67
Identity = 105/174 (60.34%), Postives = 131/174 (75.29%), Query Frame = 0 
Query:    5 NKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSP-------------FVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDG 165
            +K AK+  + G +PQ+QDCYEGERL+ +L+ I   IESA+ L GNSLPEK W KQ+FAIGVN+VTRVLERM+  ++     Q P              V+ QAI++A DCNPKWL KHLP+LA SRKVP+I VKD KKGSLRLGELVKLKTA+AIGVK +G++INQ++EEIL+G
Sbjct:    8 SKNAKDASKSGFVPQEQDCYEGERLVRLLKLINGAIESAKLLDGNSLPEKFWFKQRFAIGVNEVTRVLERMSPTVEMEGFGQKPPPHVISTQHRKPTAVQLQAIVIAHDCNPKWLMKHLPSLASSRKVPVIFVKDGKKGSLRLGELVKLKTAIAIGVKDKGNSINQVVEEILNG 181
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BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Match: A0A1Q3BTR6_CEPFO (Ribosomal_L7Ae domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14849 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 6.410e-66
Identity = 111/183 (60.66%), Postives = 132/183 (72.13%), Query Frame = 0 
Query:    1 MPPRNKAAKNNIQDGA----LPQQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPF----------VRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGDEPN 169
            MP RNKA+K    DG+    LPQ+Q  YEGERL   L+ I+R I SAR   GNS PEK+WLKQQFAIGVNDVTRVLERM+ I+  G + Q P           V  QAIL+A+DCNP+ L KHLP+LA S+KVPL  V D K GSLRLGELVKLKTA+AIGVK +G++IN+IME+IL G+E N
Sbjct:    1 MPRRNKASKMPQIDGSKTSFLPQEQGYYEGERLACFLKLIQREILSARISDGNSFPEKIWLKQQFAIGVNDVTRVLERMSPIVGVGCSPQQPHAFCSNHKGPSVSLQAILVASDCNPRLLIKHLPSLASSKKVPLFFVNDKKGGSLRLGELVKLKTAIAIGVKVKGNSINEIMEKILHGNEIN 183
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BLAST of Ghir_A11G011270.1 vs. TAIR10
Match: AT4G01790.1 (| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr4:769868-770728 FORWARD LENGTH=167)

HSP 1 Score: 171.785 bits (434), Expect = 3.229e-55
Identity = 82/148 (55.41%), Postives = 114/148 (77.03%), Query Frame = 0 
Query:   19 QQQDCYEGERLIHVLESIRRGIESARALAGNSLPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAADCNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKARGSAINQIMEEILDGD 166
            ++ D YEGERL H+L+ I+RGIE+++    NSLPEK+WLK+Q AIG+N+VTRVLERM    ++ S  Q    + Q ++L ADC P+ LTKH+P LA SR VP++ V+D+K+ SLRLGELVKLKTA+AIG+KARG+ +N ++++IL  D
Sbjct:   21 KESDYYEGERLTHLLDLIQRGIETSKLSNVNSLPEKIWLKKQIAIGINEVTRVLERMNP--NNTSDQQQNPKQLQVVILVADCKPRMLTKHIPNLAASRNVPVLYVRDNKRASLRLGELVKLKTALAIGIKARGNDLNLLLKQILPRD 166
The following BLAST results are available for this feature:
BLAST of Ghir_A11G011270.1 vs. NCBI nr
Analysis Date: 2018-11-20 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1029099902|ref|XP_016709303.1|7.132e-120100.00PREDICTED: uncharacterized protein LOC107923626 [G... [more]
gi|823187658|ref|XP_012490257.1|9.174e-11898.22PREDICTED: uncharacterized protein LOC105802895 [G... [more]
gi|1050614195|ref|XP_017629874.1|3.365e-11798.22PREDICTED: uncharacterized protein LOC108472826 [G... [more]
gi|1269965884|ref|XP_022733256.1|4.161e-10083.43uncharacterized protein LOC111287187 isoform X1 [D... [more]
gi|1269967581|ref|XP_022734148.1|7.200e-10083.43uncharacterized protein LOC111287738 isoform X1 [D... [more]
gi|1269967589|ref|XP_022734153.1|1.830e-9882.84uncharacterized protein LOC111287739 isoform X1 [D... [more]
gi|1269917805|ref|XP_022770725.1|1.051e-9781.66uncharacterized protein LOC111314023 [Durio zibeth... [more]
gi|508703562|gb|EOX95458.1|2.512e-9582.84Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... [more]
gi|1063461314|ref|XP_007051301.2|1.345e-9482.25PREDICTED: uncharacterized protein LOC18613811 [Th... [more]
gi|1269965886|ref|XP_022733257.1|2.217e-9481.07uncharacterized protein LOC111287187 isoform X2 [D... [more]
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BLAST of Ghir_A11G011270.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ghir_A11G011270.1 vs. ExPASy TrEMBL
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A1U8L7D9_GOSHI5.031e-120100.00uncharacterized protein LOC107923626 OS=Gossypium ... [more]
A0A0D2SBS2_GOSRA6.472e-11898.22Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8K5B0_GOSHI6.472e-11898.22uncharacterized protein LOC107912243 OS=Gossypium ... [more]
A0A061DZK2_THECC1.772e-9582.84Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... [more]
A0A1R3H1L8_COCAP4.356e-9279.64Ribosomal protein L7Ae/L30e/S12e/Gadd45 OS=Corchor... [more]
A0A1R3IIE1_9ROSI5.859e-9278.11Ribosomal protein L7Ae/L30e/S12e/Gadd45 OS=Corchor... [more]
A0A2I4FMN2_9ROSI5.687e-6960.87uncharacterized protein LOC109000492 OS=Juglans re... [more]
A0A251PT09_PRUPE1.389e-6760.47Uncharacterized protein OS=Prunus persica OX=3760 ... [more]
A0A2C9VS67_MANES9.910e-6760.34Uncharacterized protein OS=Manihot esculenta OX=39... [more]
A0A1Q3BTR6_CEPFO6.410e-6660.66Ribosomal_L7Ae domain-containing protein OS=Cephal... [more]
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BLAST of Ghir_A11G011270.1 vs. TAIR10
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs arabidopsis TAIR10)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G01790.13.229e-5555.41| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gad... [more]
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InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium hirsutum proteins
Date Performed: 2018-11-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 34..166
e-value: 8.5E-28
score: 98.3
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 30..162
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 93..150
e-value: 1.0E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR21596RIBONUCLEASE P SUBUNIT P38coord: 6..168
NoneNo IPR availablePANTHERPTHR21596:SF45SUBFAMILY NOT NAMEDcoord: 6..168

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ghir_A11G011270.1_HAU-AD1_v1.0 ID=Ghir_A11G011270.1_HAU-AD1_v1.0; Name=Ghir_A11G011270.1; organism=Gossypium hirsutum; type=mRNA; length=861bp
TCTAAATAGATTTCTTATGAACTTTTCATCGAAGAAGTAGCGAGCGAACT
CTGCAAACAAGAAACATGCCGCCTAGAAACAAGGCGGCCAAAAACAACAT
TCAGGATGGCGCCCTTCCTCAACAGCAAGATTGCTATGAAGGAGAACGGC
TCATTCACGTGCTTGAATCAATCCGAAGAGGGATAGAGTCAGCCAGAGCG
CTGGCTGGAAACTCCTTGCCTGAAAAAGTGTGGCTTAAGCAACAATTTGC
AATCGGTGTTAATGACGTAACACGTGTACTTGAACGGATGGCAGCCATTA
TTGACGACGGGAGCACTGCCCAATCACCTTTTGTTAGATTTCAGGCTATA
CTGTTAGCTGCTGATTGCAACCCAAAGTGGCTGACGAAGCACCTGCCAAC
GTTGGCTAAATCAAGAAAGGTACCGTTGATCATTGTTAAAGATGATAAAA
AGGGGTCCTTAAGATTGGGTGAGCTTGTAAAGCTAAAAACAGCTGTTGCA
ATTGGAGTAAAGGCTCGAGGAAGTGCTATCAATCAAATCATGGAGGAAAT
TCTTGATGGTGACGAACCCAATTAAAGGGCTCTGCTTCAAGTTCAATATG
ACTTGCCAGTTTTTTTTTTTTTTGCAGTCAGAATGGAATGAAAGAGCTGT
TTATTATTATTATTTTTTAATTCTATGTTGTTATGGTCCCTATGGTAATG
AAAGGGATTTAAAATGTAGAAATTGATATCTATGAGAAACCAGCAGAAAA
GCCTCACATGATTGAGATCTGTTTTTTGTTTGAAAAATTACAACACAAAA
CCTAAGCAATTGTATTCGGATATATTTTTAAACATAAATATAAAAATATG
ATTTTCTACAT
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protein sequence of Ghir_A11G011270.1_HAU-AD1_v1.0

>Ghir_A11G011270.1_HAU-AD1_v1.0 ID=Ghir_A11G011270.1_HAU-AD1_v1.0; Name=Ghir_A11G011270.1_HAU-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=169bp
MPPRNKAAKNNIQDGALPQQQDCYEGERLIHVLESIRRGIESARALAGNS
LPEKVWLKQQFAIGVNDVTRVLERMAAIIDDGSTAQSPFVRFQAILLAAD
CNPKWLTKHLPTLAKSRKVPLIIVKDDKKGSLRLGELVKLKTAVAIGVKA
RGSAINQIMEEILDGDEPN
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mRNA from alignment at Ghir_A11:10849377..10850717-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ghir_A11G011270.1_HAU-AD1_v1.0 ID=Ghir_A11G011270.1_HAU-AD1_v1.0; Name=Ghir_A11G011270.1; organism=Gossypium hirsutum; type=mRNA; length=1341bp; location=Sequence derived from: Ghir_A11:10849377..10850717- (Gossypium hirsutum
TCTAAATAGATTTCTTATGAACTTTTCATCGAAGAAGTAGCGAGCGAACT
CTGCAAACAAGAAACATGCCGCCTAGAAACAAGGCGGCCAAAAACAACAT
TCAGGATGGCGCCCTTCCTCAACAGCAAGAGTATGTCTCTTTTAATTTCA
TTAGATTTTATAAAAACTGTCTTTTGATTTCTTACTTTTTTATTTTTCTT
CGGGTCCTGAAAGTTGCTATGAAGGAGAACGGCTCATTCACGTGCTTGAA
TCAATCCGAAGGTAAATAATTCGAAACAATTAGCTTCGATTAACAAATAC
CCTTTTTTTTTCAATTCAACTACTTGTTGTTTTACGTAGTTAAATTTTAT
TATGTTATTTCAATGAACAGAGGGATAGAGTCAGCCAGAGCGCTGGCTGG
AAACTCCTTGCCTGAAAAAGTGTGGCTTAAGGTTTGATGTCTTAGCCAAT
GCTGTACTCATTTTTTTCGACTAACCTTGTGGTTTTATTATTGTCTGATT
ATAATATTTGTGGCATTTTAGCAACAATTTGCAATCGGTGTTAATGACGT
AACACGTGTACTTGAACGGATGGCAGCCATTATTGACGACGGGAGCACTG
CCCAATCACCTTTTGTTAGATTTCAGGTTAGCTATCCTGGTTTTACCCAT
GTTTTAACAAGCAGCTAGGGTTAGTTTTTTATTGCTTGTACGTTTGCTGT
TAAGTAGCTCGAGACTTGGTGTATGTTTGTTGCGTTTGTAGGCTATACTG
TTAGCTGCTGATTGCAACCCAAAGTGGCTGACGAAGCACCTGCCAACGTT
GGCTAAATCAAGAAAGGTACCGTTGATCATTGTTAAAGATGATAAAAAGG
GGTCCTTAAGATTGGGTGAGCTTGTAAAGCTAAAAACAGCTGTTGCAATT
GGAGTAAAGGTTAGGATCTCGAATTTGCTGATTGTTTTTTAACCTAGGGT
GTTTTTGACTATGTGCTGAAATATTTGTCTTTTAAACTATAGGCTCGAGG
AAGTGCTATCAATCAAATCATGGAGGAAATTCTTGATGGTGACGAACCCA
ATTAAAGGGCTCTGCTTCAAGTTCAATATGACTTGCCAGTTTTTTTTTTT
TTTGCAGTCAGAATGGAATGAAAGAGCTGTTTATTATTATTATTTTTTAA
TTCTATGTTGTTATGGTCCCTATGGTAATGAAAGGGATTTAAAATGTAGA
AATTGATATCTATGAGAAACCAGCAGAAAAGCCTCACATGATTGAGATCT
GTTTTTTGTTTGAAAAATTACAACACAAAACCTAAGCAATTGTATTCGGA
TATATTTTTAAACATAAATATAAAAATATGATTTTCTACAT
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Coding sequence (CDS) from alignment at Ghir_A11:10849377..10850717-

>Ghir_A11G011270.1_HAU-AD1_v1.0 ID=Ghir_A11G011270.1_HAU-AD1_v1.0; Name=Ghir_A11G011270.1; organism=Gossypium hirsutum; type=CDS; length=510bp; location=Sequence derived from: Ghir_A11:10849377..10850717- (Gossypium hirsutum
ATGCCGCCTAGAAACAAGGCGGCCAAAAACAACATTCAGGATGGCGCCCT
TCCTCAACAGCAAGATTGCTATGAAGGAGAACGGCTCATTCACGTGCTTG
AATCAATCCGAAGAGGGATAGAGTCAGCCAGAGCGCTGGCTGGAAACTCC
TTGCCTGAAAAAGTGTGGCTTAAGCAACAATTTGCAATCGGTGTTAATGA
CGTAACACGTGTACTTGAACGGATGGCAGCCATTATTGACGACGGGAGCA
CTGCCCAATCACCTTTTGTTAGATTTCAGGCTATACTGTTAGCTGCTGAT
TGCAACCCAAAGTGGCTGACGAAGCACCTGCCAACGTTGGCTAAATCAAG
AAAGGTACCGTTGATCATTGTTAAAGATGATAAAAAGGGGTCCTTAAGAT
TGGGTGAGCTTGTAAAGCTAAAAACAGCTGTTGCAATTGGAGTAAAGGCT
CGAGGAAGTGCTATCAATCAAATCATGGAGGAAATTCTTGATGGTGACGA
ACCCAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR029064Ribosomal_eL30-like_sf
IPR004038Ribosomal_eL8/eL30/eS12/Gad45