Ghir_D12G008260.1_HAU-AD1_v1.0, Ghir_D12G008260.1_HAU-AD1_v1.0 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1028944186|ref|XP_016715360.1| (PREDICTED: RING-H2 finger protein ATL54-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 784.252 bits (2024), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1344123408|gb|PPD96073.1| (hypothetical protein GOBAR_DD06898 [Gossypium barbadense]) HSP 1 Score: 778.859 bits (2010), Expect = 0.000e+0 Identity = 376/379 (99.21%), Postives = 378/379 (99.74%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MRDLD TPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVEN+VGEGGTS+EMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MRDLDPTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENDVGEGGTSQEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|823207030|ref|XP_012437231.1| (PREDICTED: RING-H2 finger protein ATL54-like [Gossypium raimondii] >gi|763781802|gb|KJB48873.1| hypothetical protein B456_008G091200 [Gossypium raimondii]) HSP 1 Score: 772.696 bits (1994), Expect = 0.000e+0 Identity = 375/379 (98.94%), Postives = 376/379 (99.21%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MPDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1347723629|gb|PPS19542.1| (hypothetical protein GOBAR_AA01029 [Gossypium barbadense]) HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0 Identity = 361/379 (95.25%), Postives = 364/379 (96.04%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDL PGSACK QGRENKSGPCNQPCGNNHKPLPRPTPQALPPG +HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPV FFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKK+DGLIEGTECSVCLNEFQENESLRLL KCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIA TSEP PNSIDSGSSNET VEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MPDLDLPLPGSACKCQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGQ---KHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVFFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKYDGLIEGTECSVCLNEFQENESLRLLPKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAHTSEPGPNSIDSGSSNETPVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 376
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1050627194|ref|XP_017636518.1| (PREDICTED: RING-H2 finger protein ATL54-like [Gossypium arboreum]) HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0 Identity = 357/379 (94.20%), Postives = 361/379 (95.25%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDL PGSACK QGRENKSGPCNQPCGNNHKPLPRPTPQALPPG +HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKK+DGLIEGTECSVCLNEFQENESLRLL KCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIA TSEP PNSIDSGSSNET VEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAM+IAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSI RSLTKGPVSMKRSFSSGGIFL SKRTK Q SILPL
Sbjct: 1 MPDLDLPLPGSACKCQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGQ---KHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKYDGLIEGTECSVCLNEFQENESLRLLPKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAHTSEPGPNSIDSGSSNETPVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMKIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIRRSLTKGPVSMKRSFSSGGIFLFSKRTKCQGSILPL 376
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1029106236|ref|XP_016705400.1| (PREDICTED: RING-H2 finger protein ATL54-like [Gossypium hirsutum]) HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0 Identity = 357/379 (94.20%), Postives = 360/379 (94.99%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDL PGSACK QGRENKSGPCNQPCGNNHKPLPRPTPQALPPG +HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKK+DGLIEGTECSVCLNEFQENESLRLL KCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIA TSEP PNSIDSGSSNET VEN+VGEGG SEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSI RSLTKGPVSMKRSFSSGGIFL SKRTK Q SILPL
Sbjct: 1 MPDLDLPLPGSACKCQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGQ---KHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKYDGLIEGTECSVCLNEFQENESLRLLPKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAHTSEPGPNSIDSGSSNETPVENDVGEGGISEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIRRSLTKGPVSMKRSFSSGGIFLFSKRTKCQGSILPL 376
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1028944188|ref|XP_016715361.1| (PREDICTED: RING-H2 finger protein ATL54-like isoform X2 [Gossypium hirsutum] >gi|1028944190|ref|XP_016715362.1| PREDICTED: RING-H2 finger protein ATL54-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 311
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|763781801|gb|KJB48872.1| (hypothetical protein B456_008G091200 [Gossypium raimondii]) HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0 Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 311
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|1269880945|ref|XP_022751112.1| (RING-H2 finger protein ATL51-like [Durio zibethinus]) HSP 1 Score: 413.305 bits (1061), Expect = 5.725e-140 Identity = 236/396 (59.60%), Postives = 284/396 (71.72%), Query Frame = 0
Query: 6 LTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQ-------ALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVE----------NEVGEGGTSEEMRTCRIEDEDNWENSRKILGH-------SDSNILTDIDGIQEEIHATRRSVSLDLSSAMEI----AGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQ 373
+ PP C R++++ C+Q C H+ LP P + P + E +L++TG T++ SM+S+ALL+ IF A+VR YFN+R SRRRS P++F T+DDF L+E++ P +DNPIW+INTVGLQQSVIDSITVFKYKKH+GLIEGTECSVCLNEFQE+ESLRLL KCSH FHLPCIDTWLRSH+NCPLCRAPVV ETM+AQ S PNS+ SGS NETLVE N+V EGGTS E+RTC ED + ENS+K L H SDS++L+D+ G+Q+++ RRSVSLDLSSA+EI AG HKH GSLDTELQQLK GKI KR SSI KLMKSSSIGRSL+KGP+SMKRSFSSGG FLLSK+ K Q
Sbjct: 9 MPPPKCYCNRGPRKHEN--CDQLCKPKHELLPDPVRKILPLPPPPSSTNAPT-DRKESNLMITGMTIMGSMISAALLVAIFCAIVRSYFNRRNR-SRRRSSPIIF-ATRDDF-LEEERGPHLDNPIWHINTVGLQQSVIDSITVFKYKKHEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHLPCIDTWLRSHKNCPLCRAPVVCETMVAQASASEPNSMGSGSRNETLVENSENYGGLGRNDVAEGGTS-ELRTCPTEDVNASENSKKSLVHSKTRSSDSDSHVLSDLAGVQDDVQPMRRSVSLDLSSALEIYSDVAGLRIGAHKHHGSLDTELQQLKHPKGKILAKRGSESSSICKLMKSSSIGRSLSKGPISMKRSFSSGGKFLLSKKIKIQ 397
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Match: gi|508700108|gb|EOX92004.1| (RING/U-box superfamily protein, putative [Theobroma cacao]) HSP 1 Score: 410.609 bits (1054), Expect = 4.014e-139 Identity = 222/350 (63.43%), Postives = 264/350 (75.43%), Query Frame = 0
Query: 53 HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQ--VDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVE----------NEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSD-------SNILTDIDGIQEEIHATRRSVSLDLSSAMEI----AGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
+ + ++++TG V+ SMLS+ALL+ IF ALVR YF +R RRS+P+ FFGTQ+DF LDED+ P+ +DNPIWYINT+GLQQSVIDSITVFKYKK +GLIEGTECSVCLNEFQE+ESLRLL KCSH FHLPCIDTWLRSH+NCPLCRAPVV E+++AQ + PNS DSGS N+TLVE N+VGEG TS E+RTC IED + ENS+K L HS S IL++I G+Q+++ TRRSVSLDLSSA+EI AG HKH GSLDTEL+QLK GKI KR SSI K+MKS SIGRSL+KG +SMKRSFSSGG FL SK+ + Q SILPL
Sbjct: 42 YKQGNVMITGVIVIGSMLSTALLIAIFCALVRSYFIRRNRS--RRSMPL-FFGTQEDF-LDEDRGPEPHLDNPIWYINTIGLQQSVIDSITVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHLPCIDTWLRSHKNCPLCRAPVVCESIVAQATASEPNSSDSGSRNDTLVENSENYGGLGRNDVGEGETS-EVRTCPIEDGNTCENSKKSLVHSKTRISDSGSQILSNIAGVQDDVQPTRRSVSLDLSSALEIHSDVAGPGNGAHKHHGSLDTELRQLKYPKGKIVGKRGSESSSICKMMKSCSIGRSLSKGQISMKRSFSSGGKFLSSKKCRSQDSILPL 386
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 5.359e-39 Identity = 83/206 (40.29%), Postives = 117/206 (56.80%), Query Frame = 0
Query: 54 DEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKI 259
D S++ V+A +L+ L+ FF+ N+ T S V ++ F D +Q VD+PIW I T GLQQS+I+SIT+ YK+ DGLIE T+C VCLNEF+E+ESLRLL KC+H FH+ CIDTWL SH NCPLCRA + MI+ T+ + + EV GG+ + +++ED+ E ++
Sbjct: 81 DAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVM----EEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIA---MISVTTPRYSGPV------------EVTPGGSGSHLENDGVDEEDHGEIENRV 264
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.506e-34 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 0
Query: 124 IWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNE 226
+W I TVGL +S I+SITV +KK +G+I+GTECSVCLNEF+E+ESLRLL KCSH FHL CIDTWL SH+NCPLCRAPV+ T + DS SSN+
Sbjct: 102 VWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSESSND 204
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.362e-34 Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPV 202
+L+SAL+L ++ L+ Y ++ S +L + G + FF +I N GL +S+I SITV+KYK DG ++G++CSVCL+EF+ENESLRLL KC+H FHLPCIDTWL+SH NCPLCRA V
Sbjct: 64 ILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNG--EGFFSSTQRIS--------TNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 3.273e-33 Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVF-----FGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMI 208
+L+SA +L ++ L+ Y ++R ++S S + + Q + + + I GL +S+I SITV+KY+K DG +E ++CSVCL+EFQENESLRLL KC+H FH+PCIDTWL+SH NCPLCRA +V+ + +
Sbjct: 66 ILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV 210
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.855e-25 Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 0
Query: 131 GLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEP 214
GL +++I+ ITV KY++ DG + T+CSVCL EF + ESLRLL +CSH FH CIDTWL+SH NCPLCRA + T+ + EP
Sbjct: 131 GLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEP 214
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 3.376e-25 Identity = 83/243 (34.16%), Postives = 115/243 (47.33%), Query Frame = 0
Query: 25 CNQPCGN-NHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLY-FNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYI---NTVGLQQSVIDSITVFKYKKH-DGL-IEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKIL 260
C Q C N P P Q L G V + S LV + + ++A LL ++ LV Y N TN + S + D LD + + D + +T GL ++I I FK KKH +G I GT+CS+CL EF E+ESLRLL KC+H FH+ CID WL+SH NCPLCRA ++ T ++D +SN E V EE+ +W ++ I+
Sbjct: 28 CPQWCTYINFSPPPISYEQFLNDG--VASNPNLSPLVIA---IFGIFATAFLLAAYYTLVSKYCANDTTNEAASES-------GRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDHREEVSVSISSHHPSWFSAADIV 258
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.470e-22 Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 0
Query: 60 VTGFTVVASMLSSALLLC-IFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVS 204
+ F +V +LS +C I LVR Y K+ S S P Q+ F D D + +++++ GL Q++ID++ VF YK+ G E +C+VCL EF E++ LRLL CSH FH+ CIDTWL S+ CPLCR + S
Sbjct: 52 IILFIIV--LLSVIFFICSILHLLVRYYLKKK--RSNLSSSPNE--SNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.865e-20 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 131 GLQQSVIDSITVFKYKKHDGLI-------EGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSET-----MIAQTSEPWPNSIDSGSSN 225
GL +S I +I VFK+KK D + ECSVCLNEFQE+E LR++ C H FH+ CID WL+ + NCPLCR V E +I+ S P NS S + N
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRN 207
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL48_ARATH (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.577e-19 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 64 TVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHD-GLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSE 213
+V+ ++S L+ +F ++ L F S P+ F D F PQ+ + +++++ GL Q+ ID++ VF Y L + +C+VCLNEF + + LRLL CSH FHL CIDTWL S+ CPLCR + + + SE
Sbjct: 118 SVLCLVISGLALIIVFLGVLYLIFKFLRKSSTL--FPIPHFNYNPDLF--SFSSPQLQH-LFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHSE 263
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.462e-19 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query: 106 TQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGL-IEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVS 204
+++D+F + + ++ ++ G+ QS+ID++ VF YK GL I +C VCL EF+ + LRLL KCSH FH+ CIDTWL SH CPLCR+ ++S
Sbjct: 74 SREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS 173
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A1U8LLH9_GOSHI (RING-H2 finger protein ATL54-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107928616 PE=4 SV=1) HSP 1 Score: 784.252 bits (2024), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A0D2RCB8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G091200 PE=4 SV=1) HSP 1 Score: 772.696 bits (1994), Expect = 0.000e+0 Identity = 375/379 (98.94%), Postives = 376/379 (99.21%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MPDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A1U8KSG3_GOSHI (RING-H2 finger protein ATL54-like OS=Gossypium hirsutum OX=3635 GN=LOC107920286 PE=4 SV=1) HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0 Identity = 357/379 (94.20%), Postives = 360/379 (94.99%), Query Frame = 0
Query: 1 MRDLDLTPPGSACKFQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
M DLDL PGSACK QGRENKSGPCNQPCGNNHKPLPRPTPQALPPG +HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKK+DGLIEGTECSVCLNEFQENESLRLL KCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIA TSEP PNSIDSGSSNET VEN+VGEGG SEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSI RSLTKGPVSMKRSFSSGGIFL SKRTK Q SILPL
Sbjct: 1 MPDLDLPLPGSACKCQGRENKSGPCNQPCGNNHKPLPRPTPQALPPGQ---KHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKYDGLIEGTECSVCLNEFQENESLRLLPKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAHTSEPGPNSIDSGSSNETPVENDVGEGGISEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIRRSLTKGPVSMKRSFSSGGIFLFSKRTKCQGSILPL 376
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A1U8LL86_GOSHI (RING-H2 finger protein ATL54-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107928616 PE=4 SV=1) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 311
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A0D2PRN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G091200 PE=4 SV=1) HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0 Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVEN+VGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEI ATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSI KLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL
Sbjct: 1 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENDVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIQATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSICKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 311
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A061DHM5_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_001032 PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 2.832e-139 Identity = 222/350 (63.43%), Postives = 264/350 (75.43%), Query Frame = 0
Query: 53 HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQ--VDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVE----------NEVGEGGTSEEMRTCRIEDEDNWENSRKILGHSD-------SNILTDIDGIQEEIHATRRSVSLDLSSAMEI----AGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
+ + ++++TG V+ SMLS+ALL+ IF ALVR YF +R RRS+P+ FFGTQ+DF LDED+ P+ +DNPIWYINT+GLQQSVIDSITVFKYKK +GLIEGTECSVCLNEFQE+ESLRLL KCSH FHLPCIDTWLRSH+NCPLCRAPVV E+++AQ + PNS DSGS N+TLVE N+VGEG TS E+RTC IED + ENS+K L HS S IL++I G+Q+++ TRRSVSLDLSSA+EI AG HKH GSLDTEL+QLK GKI KR SSI K+MKS SIGRSL+KG +SMKRSFSSGG FL SK+ + Q SILPL
Sbjct: 42 YKQGNVMITGVIVIGSMLSTALLIAIFCALVRSYFIRRNRS--RRSMPL-FFGTQEDF-LDEDRGPEPHLDNPIWYINTIGLQQSVIDSITVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHLPCIDTWLRSHKNCPLCRAPVVCESIVAQATASEPNSSDSGSRNDTLVENSENYGGLGRNDVGEGETS-EVRTCPIEDGNTCENSKKSLVHSKTRISDSGSQILSNIAGVQDDVQPTRRSVSLDLSSALEIHSDVAGPGNGAHKHHGSLDTELRQLKYPKGKIVGKRGSESSSICKMMKSCSIGRSLSKGQISMKRSFSSGGKFLSSKKCRSQDSILPL 386
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A1R3GDK9_COCAP (Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_26710 PE=4 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 1.116e-118 Identity = 211/374 (56.42%), Postives = 251/374 (67.11%), Query Frame = 0
Query: 29 CGNNHKPLPRPTPQALP-PGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIP-----QVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWP-------NSIDSGSSNETLVEN------EVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEI----AGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
C + +P P P+ P P P + L+VTG TVV SM+S+ALLL IFFA+VR +FN+R SR RSLP++F QD FLDED+ P +D+PIWYINT+GLQQSVIDSIT+FKYKK +GLI+GTECSVCL EF+E+ESLRLL KCSH FHLPCIDTWLRSH+NCPLCRAP+V + M+ ++ NSI SG SNET VEN +V EGG SE ED ++ ENS K LG+S G+Q RRSVSLDLSSAMEI A HKH GSLD+EL ++KC GKI KRS SS KLMKSSSIGRS ++G VSMKRSFSSGG FL SK+++ Q SI PL
Sbjct: 24 CVKVYATVPPPCPEQTPLPALPPPSYKHNKLMVTGITVVGSMISTALLLAIFFAIVRFHFNRRNR-SRTRSLPLIFDTRQD--FLDEDRGPDPMAQHLDHPIWYINTIGLQQSVIDSITIFKYKKDEGLIDGTECSVCLTEFEEDESLRLLPKCSHAFHLPCIDTWLRSHKNCPLCRAPIVCDAMVGIGTQASASSSSSELNSIPSGPSNETQVENSENSSSDVAEGGISES------EDGNSSENSMKSLGNSKRRSFDSGSGVQ----PIRRSVSLDLSSAMEIYRDVARLGIGAHKHHGSLDSELGRIKCPKGKIVGKRSNESSSKRKLMKSSSIGRSFSRGHVSMKRSFSSGGKFLFSKQSRSQDSIFPL 384
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A1R3L4A7_9ROSI (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_00217 PE=4 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 9.650e-112 Identity = 204/373 (54.69%), Postives = 248/373 (66.49%), Query Frame = 0
Query: 29 CGNNHKPLPRPTPQALP-PGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQ-----VDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSE-------PWPNSIDSGSSNETLVEN-----EVGEGGTSEEMRTCRIEDEDNWENSRKILGHSDSNILTDIDGIQEEIHATRRSVSLDLSSAMEIAGEAT----AKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
C + +P P P+ P P + LLVTG TV+ SM+S+ALLL IFFA+VR +FN+R SR RSLP++F QD FLDED+ P +D+PIWYINT+GLQQSVIDSIT+FKYKK +GLI+GTECSVCL EF+E+ESLRLL KCSH FH+ CIDTWLRSH+NCPLCRAP+V + M+A ++ NSI SG SNET VEN +V G SE ED ++ ENS K LG+S G++ RRSVSLDLSSAMEI + + HKH GSLD+EL ++KC GKI KRS S KLMKSSSIGRS ++G VSMKRSFSSGG FL SK+++ Q SI PL
Sbjct: 24 CVKGYATVPPPCPEQTPLPSDAPPSYKHNKLLVTGITVMGSMISTALLLAIFFAIVRFHFNRRNR-SRTRSLPLIFDTRQD--FLDEDRGPDPTAQYLDHPIWYINTIGLQQSVIDSITIFKYKKDEGLIDGTECSVCLTEFEEDESLRLLPKCSHAFHISCIDTWLRSHKNCPLCRAPIVCDAMVAIGAQASASSSSEESNSIPSGPSNETQVENSESSSDVAGGRISES------EDGNSSENSMKSLGNSKRRFFDSGSGVE----PMRRSVSLDLSSAMEIYRDVSCLGIGAHKHHGSLDSELGRIKCPKGKIVGKRSNESPSKRKLMKSSSIGRSFSRGHVSMKRSFSSGGKFLFSKQSRSQDSIFPL 383
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: A0A2I4EF83_9ROSI (RING-H2 finger protein ATL52-like OS=Juglans regia OX=51240 GN=LOC108989052 PE=4 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.030e-92 Identity = 180/350 (51.43%), Postives = 225/350 (64.29%), Query Frame = 0
Query: 53 HDEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPN-SIDSGSSNETLVEN------EVGEGGTSEEM-------RTCRIEDEDNWEN-----SRKILGHSDSNILTDID----GIQEEIHATRRSVSLDLSSAMEIAGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGSSIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
H E L+ + ++ ALL+ I F ++R Y++ R + S R + P++F +D FLDED P +D+PIWYI+TVGLQQ VIDSITVFKYKK +GLI+GTECS+CL+EF+E+ESLRLL KCSH FHLPCID+WLRSH+NCPLCRAPVVS+ +Q PN S+ +GSS ETLVEN EVGEGGTSEE+ IED EN G+ S +++++D ++EE+ RRSVSLD SSA+ I +GS +L LK S K+ K G SS KLMKSSSIGRSL KGP+SMKRSFSS FL S+ K SSILPL
Sbjct: 49 HYENRLINASLIITTCIVGGALLVAIMFIIIRKYYSSRNS-SSRINSPILFDTRED--FLDEDHGPVIDHPIWYIHTVGLQQHVIDSITVFKYKKDEGLIDGTECSICLSEFEEDESLRLLPKCSHAFHLPCIDSWLRSHKNCPLCRAPVVSDVTGSQVPPTEPNVSVSAGSSGETLVENLENYDGEVGEGGTSEEVGVGDGSFSALAIEDGRGAENSKKSMQSSSSGNRHSRVVSNLDENQRAVKEEVQPVRRSVSLDPSSALRIYHAVANIVADQGSSKAQLANLKSSGKKMVTKPESGTSSTCKLMKSSSIGRSLQKGPISMKRSFSSSRRFLSSRHCKSASSILPL 395
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Match: V4SQZ5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10025698mg PE=4 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 3.110e-85 Identity = 176/356 (49.44%), Postives = 221/356 (62.08%), Query Frame = 0
Query: 56 QSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLV---ENEVGE-----GGTSEEMR--------TCRIEDEDNWENSRKILGH-------SDSNILTDIDG----IQEEIHATRRSVSLDLSSAMEI---AGEATAKHKHRGSLDTELQQLKCSTGKIAVKRSRGGS--SIYKLMKSSSIGRSLTKGPVSMKRSFSSGGIFLLSKRTKGQSSILPL 379
+ L+ G VV+ +++ LL I A VR+ ++R N R P + F TQ+DFF DED P +D+PIWYINT+GL QSVIDSI VFKYKK GLIEGT+CSVCL+EFQE+ESLRLL KC+H FH+ CIDTWLRSH NCPLCRAP++S +AQ SE PNS DS S NE +V EN GE GG + E+R + +EDE ++S KIL H S +L+D+ ++E+ RRSVSLD S+A I E KH+G++D +L + K S KI KR G S SI +L+KSSSIG SL KGP+ MKRS SS G L S R + S LPL
Sbjct: 69 KQLVTMGMIVVSCIIAGTLLFGILCAAVRVCRSRRNNSRRTN--PPIIFATQEDFF-DEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGSDNVGGGTGEVRNGNDNNNGSLPVEDERTVDDSMKILPHLKTRNCDSGCRVLSDLAESRRMVEEDTQPMRRSVSLDASAASMIYNAVTEGVVHVKHQGNMDAQLGKSKSSKSKIVFKRGSGSSSPSICRLVKSSSIGSSLQKGPMLMKRSHSSIGK-LPSSRHSRRYSALPL 420
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT1G72220.1 (| Symbols: | RING/U-box superfamily protein | chr1:27184388-27185629 REVERSE LENGTH=413) HSP 1 Score: 147.132 bits (370), Expect = 3.884e-40 Identity = 83/206 (40.29%), Postives = 117/206 (56.80%), Query Frame = 0
Query: 54 DEQSLLVTGFTVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKI 259
D S++ V+A +L+ L+ FF+ N+ T S V ++ F D +Q VD+PIW I T GLQQS+I+SIT+ YK+ DGLIE T+C VCLNEF+E+ESLRLL KC+H FH+ CIDTWL SH NCPLCRA + MI+ T+ + + EV GG+ + +++ED+ E ++
Sbjct: 81 DAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVM----EEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIA---MISVTTPRYSGPV------------EVTPGGSGSHLENDGVDEEDHGEIENRV 264
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT4G33565.1 (| Symbols: | RING/U-box superfamily protein | chr4:16136821-16137924 FORWARD LENGTH=367) HSP 1 Score: 138.658 bits (348), Expect = 1.789e-37 Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 0
Query: 120 VDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVV-SETMIAQTSE 213
VD+PIW+I T+GL +VI SI V +Y K DG++EGT+CSVCL+EF+E E+LRLL KC H FHL CIDTWLRSH NCPLCRAP+V + TMI SE
Sbjct: 180 VDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDDHSE 274
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT5G10380.1 (| Symbols: RING1, ATRING1 | RING/U-box superfamily protein | chr5:3267819-3268724 FORWARD LENGTH=301) HSP 1 Score: 132.494 bits (332), Expect = 1.091e-35 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 0
Query: 124 IWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNE 226
+W I TVGL +S I+SITV +KK +G+I+GTECSVCLNEF+E+ESLRLL KCSH FHL CIDTWL SH+NCPLCRAPV+ T + DS SSN+
Sbjct: 102 VWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSESSND 204
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT5G17600.1 (| Symbols: | RING/U-box superfamily protein | chr5:5800029-5801117 REVERSE LENGTH=362) HSP 1 Score: 132.88 bits (333), Expect = 2.437e-35 Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPV 202
+L+SAL+L ++ L+ Y ++ S +L + G + FF +I N GL +S+I SITV+KYK DG ++G++CSVCL+EF+ENESLRLL KC+H FHLPCIDTWL+SH NCPLCRA V
Sbjct: 64 ILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNG--EGFFSSTQRIS--------TNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT3G03550.1 (| Symbols: | RING/U-box superfamily protein | chr3:850391-851461 REVERSE LENGTH=356) HSP 1 Score: 130.183 bits (326), Expect = 2.372e-34 Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = 0
Query: 69 MLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVF-----FGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMI 208
+L+SA +L ++ L+ Y ++R ++S S + + Q + + + I GL +S+I SITV+KY+K DG +E ++CSVCL+EFQENESLRLL KC+H FH+PCIDTWL+SH NCPLCRA +V+ + +
Sbjct: 66 ILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV 210
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT4G17905.1 (| Symbols: ATL4H | RING/U-box superfamily protein | chr4:9948853-9949785 REVERSE LENGTH=310) HSP 1 Score: 107.457 bits (267), Expect = 2.446e-26 Identity = 83/243 (34.16%), Postives = 115/243 (47.33%), Query Frame = 0
Query: 25 CNQPCGN-NHKPLPRPTPQALPPGTPVLEHDEQSLLVTGFTVVASMLSSALLLCIFFALVRLY-FNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYI---NTVGLQQSVIDSITVFKYKKH-DGL-IEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSEPWPNSIDSGSSNETLVENEVGEGGTSEEMRTCRIEDEDNWENSRKIL 260
C Q C N P P Q L G V + S LV + + ++A LL ++ LV Y N TN + S + D LD + + D + +T GL ++I I FK KKH +G I GT+CS+CL EF E+ESLRLL KC+H FH+ CID WL+SH NCPLCRA ++ T ++D +SN E V EE+ +W ++ I+
Sbjct: 28 CPQWCTYINFSPPPISYEQFLNDG--VASNPNLSPLVIA---IFGIFATAFLLAAYYTLVSKYCANDTTNEAASES-------GRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDHREEVSVSISSHHPSWFSAADIV 258
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT1G23980.1 (| Symbols: | RING/U-box superfamily protein | chr1:8484879-8485988 REVERSE LENGTH=369) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-23 Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 0
Query: 60 VTGFTVVASMLSSALLLC-IFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVS 204
+ F +V +LS +C I LVR Y K+ S S P Q+ F D D + +++++ GL Q++ID++ VF YK+ G E +C+VCL EF E++ LRLL CSH FH+ CIDTWL S+ CPLCR + S
Sbjct: 52 IILFIIV--LLSVIFFICSILHLLVRYYLKKK--RSNLSSSPNE--SNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT1G04360.1 (| Symbols: | RING/U-box superfamily protein | chr1:1167507-1168652 REVERSE LENGTH=381) HSP 1 Score: 93.2041 bits (230), Expect = 5.700e-21 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 131 GLQQSVIDSITVFKYKKHDGLI-------EGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSET-----MIAQTSEPWPNSIDSGSSN 225
GL +S I +I VFK+KK D + ECSVCLNEFQE+E LR++ C H FH+ CID WL+ + NCPLCR V E +I+ S P NS S + N
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRN 207
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT3G48030.1 (| Symbols: | hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein | chr3:17725410-17727954 REVERSE LENGTH=349) HSP 1 Score: 92.0485 bits (227), Expect = 1.143e-20 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 64 TVVASMLSSALLLCIFFALVRLYFNKRTNHSRRRSLPVVFFGTQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHD-GLIEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVSETMIAQTSE 213
+V+ ++S L+ +F ++ L F S P+ F D F PQ+ + +++++ GL Q+ ID++ VF Y L + +C+VCLNEF + + LRLL CSH FHL CIDTWL S+ CPLCR + + + SE
Sbjct: 118 SVLCLVISGLALIIVFLGVLYLIFKFLRKSSTL--FPIPHFNYNPDLF--SFSSPQLQH-LFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHSE 263
BLAST of Ghir_D12G008260.1 vs. TAIR10
Match: AT2G18650.1 (| Symbols: MEE16 | RING/U-box superfamily protein | chr2:8086860-8088131 REVERSE LENGTH=423) HSP 1 Score: 92.4337 bits (228), Expect = 1.784e-20 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query: 106 TQDDFFLDEDQIPQVDNPIWYINTVGLQQSVIDSITVFKYKKHDGL-IEGTECSVCLNEFQENESLRLLHKCSHGFHLPCIDTWLRSHQNCPLCRAPVVS 204
+++D+F + + ++ ++ G+ QS+ID++ VF YK GL I +C VCL EF+ + LRLL KCSH FH+ CIDTWL SH CPLCR+ ++S
Sbjct: 74 SREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS 173 The following BLAST results are available for this feature:
BLAST of Ghir_D12G008260.1 vs. NCBI nr
Analysis Date: 2018-11-20 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of Ghir_D12G008260.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 10
BLAST of Ghir_D12G008260.1 vs. ExPASy TrEMBL
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Ghir_D12G008260.1 vs. TAIR10
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs arabidopsis TAIR10) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium hirsutum proteins
Date Performed: 2018-11-09
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ghir_D12G008260.1_HAU-AD1_v1.0 ID=Ghir_D12G008260.1_HAU-AD1_v1.0; Name=Ghir_D12G008260.1; organism=Gossypium hirsutum; type=mRNA; length=1817bpback to top protein sequence of Ghir_D12G008260.1_HAU-AD1_v1.0 >Ghir_D12G008260.1_HAU-AD1_v1.0 ID=Ghir_D12G008260.1_HAU-AD1_v1.0; Name=Ghir_D12G008260.1_HAU-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=379bpback to top mRNA from alignment at Ghir_D12:23162010..23163826+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ghir_D12G008260.1_HAU-AD1_v1.0 ID=Ghir_D12G008260.1_HAU-AD1_v1.0; Name=Ghir_D12G008260.1; organism=Gossypium hirsutum; type=mRNA; length=1817bp; location=Sequence derived from: Ghir_D12:23162010..23163826+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at Ghir_D12:23162010..23163826+ >Ghir_D12G008260.1_HAU-AD1_v1.0 ID=Ghir_D12G008260.1_HAU-AD1_v1.0; Name=Ghir_D12G008260.1; organism=Gossypium hirsutum; type=CDS; length=1140bp; location=Sequence derived from: Ghir_D12:23162010..23163826+ (Gossypium hirsutumback to top |