Gohir.D08G252700.1, Tx_JGIv1.1_Gohir.D08G252700.1.v1.1 (mRNA) Gossypium hirsutum

Transcript Overview
NameGohir.D08G252700.1
Unique NameGohir.D08G252700.1_Tx-JGI_v1.1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length597
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D08chromosomeD08:68049262..68049858 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
abhjL2388Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
hjhjR1659Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhjL3055Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhjL4885Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjrjR1092Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hjhnR1896Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hjhnR1998Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hjrbR1983Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
bhhjL2457Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhhjL3541Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
ghhjL1943Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghhjL3659Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbhjL2007Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhjL3759Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
achjL2192Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hjhzR1787Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hjhzR1875Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
bzhjL1918Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhjL3557Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gkhjL1224Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gtbhjL1701Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghzhjL1905Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhjL3603Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthjL1907Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghthjL3561Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
adhjL2035Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhjL3798Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hgshjL2071Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshjL3818Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjtoR1552Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hjtoR1613Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdhjL2054Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhjL3798Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hjhwR1595Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hjtwR1825Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hjtwR1908Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hjuhR1554Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hjuhR1616Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
gtihjL0976Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
hjndmR1871Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hjndmR1962Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barhjL1818Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhjL3431Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbhjL1808Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhjL3415Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
hjjmbR1861Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hjjmbR1947Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hjpscR1814Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hjpscR1887Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hjpscR1912Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyhjL1873Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhjL3516Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hjhpfR1713Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hjhpfR1789Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Kirkii_Juiced.00g224030.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
Gorai.004G269500.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS:VKDL|Gobar.D08G278400.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Cotton_A_05858Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
Gbar_A08G025320.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
EVM0004904.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
GB_A08G2766Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
GB_D08G2752Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
rna-gnl|WGS:VKDL|Gobar.A08G250400.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
rna-gnl|WGS_VKGE|Gotom.D08G289600.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gene-E1A91_D08G281500v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS_VKGI|Godar.D08G290500.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Gbar_D08G025930.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
TURN.08g207020.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
EVM_prediction_Ga08G2736Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Cotton_D_gene_10015229Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gbscaffold20638.9.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gene-E1A91_A08G259200v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Ghe08G30060Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
rna-gnl|WGS_VKGI|Godar.A08G276300.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
rna-gnl|WGS_VKGE|Gotom.A08G274700.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Gohir.D08G252700.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GH_D08G02711_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GH_A08G02679_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gh_D08G257200.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
maker-Dt_08-Msloci-g-70.1096-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GhirPD0801T023300.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhM_A08G3001.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
A08G29390.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GH_D08G2648Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gh_A08G266800.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghicr24_D08G258300.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Ghir_D08G025310.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Ghicr24_A08G258400.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
maker-Dt_08_GB713_Mikado_sloci-g-70.844-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gh_D08G2457Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
aug_m-At_08-proG-4.1606-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
aug_masked-At_08-g-4.1606-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Ghir_A08G024440.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
D08G28880.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gohir.A08G232500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
maker-At_08_GB713_Mikado_sloci-g-124.524-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
mk-Dt_08_Mikado_70.1096-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GhM_D08G2933.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gohir.A08G232500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Ghi_A08G14316Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GH_A08G2653Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GhirPA0801T248800.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Gohir.D08G252700Gohir.D08G252700_Tx-JGI_v1.1Gossypium hirsutumgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gohir.D08G252700.1.five_prime_UTR.1Gohir.D08G252700.1.five_prime_UTR.1_Tx-JGI_v1.1Gossypium hirsutumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gohir.D08G252700.1.CDS.1Gohir.D08G252700.1.CDS.1_Tx-JGI_v1.1Gossypium hirsutumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gohir.D08G252700.1.three_prime_UTR.1Gohir.D08G252700.1.three_prime_UTR.1_Tx-JGI_v1.1Gossypium hirsutumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Gohir.D08G252700.1Gohir.D08G252700.1-protein_Tx-JGI_v1.1Gossypium hirsutumpolypeptide


Homology
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.180e-47
Identity = 88/129 (68.22%), Postives = 103/129 (79.84%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVE-SRDLQDLL 476
            MKQLIRRLSRVAD SAQY+LLRSDS   S  S     ++     +     +VP+G+VPVYVG+EMERFVVSAELLNHPVF+GLLN+SAQEYGYEQKGVL IPCHVLVFER+ME+LRLG+    D+QDL+
Sbjct:    1 MKQLIRRLSRVAD-SAQYSLLRSDSQRPSRRSESFLRSSVTRRSKKQTS-SVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLGLPVPIDVQDLI 127
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.933e-43
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKK--TVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGV--ESRDLQDLLRSF 485
            MK LIRRLSRVAD S+++++ RS SS  +    HR  A          ++  TVP G+VPVYVGEEMERFVVSAEL+NHP+FVGLLN+SAQEYGY QKGVLHIPCHV+VFERV+E LRLG    S DL++L+ S 
Sbjct:    1 MKHLIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLGGFEGSGDLENLVASL 135
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.099e-41
Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR 458
            MKQLIRRLSRVAD S QY+LLRS+S    +                  K  VP+G+VPVYVG EMERFVV+AELLNHPVFV LL +SAQEYGYEQ+GVL IPCHVLVFER++E+LRLG+  R
Sbjct:    1 MKQLIRRLSRVAD-STQYSLLRSESQRGRTKKEKH-------------KSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLGLADR 108
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.761e-39
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDD 494
            MK LIRRLSR+AD S+       + S          S++     R  V  +VP G+VPV VGE+ ERFVVSAELLNHPVFVGLLN+SAQEYGY QKGVLHIPC+V VFE+V+E+LR G+ + D  +L+ S S +
Sbjct:    1 MKPLIRRLSRIADSSS----CNRNRSGDIHHPTSTYSSSVFLVKRATVASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGI-ADDTSELIASLSGE 129
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.526e-12
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 3 
Query:  240 KTVPQGYVPVYVG---EEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVES 455
            K VP+G + + VG   EE +RF+V     NHP+F+ LL ++  EYG++QKG + IPCHV  F R ++AL  G  S
Sbjct:   22 KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF-RYVQALIDGERS 95
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.589e-12
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALR 440
            VP+G+ PVYVGE   R++V    L HP F  LL ++ +E+G++    L IPC  LVF+ +   +R
Sbjct:   43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.788e-12
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQK-GVLHIPCHVLVFERVMEALR 440
             P+GY+ VYVGE+M+RFV+    +N P F  LL ++ +E+GY+   G L IPC   VF+R+   L 
Sbjct:   17 APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCLN 82
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.420e-11
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQK-GVLHIPCHVLVFERVMEAL 437
             P+GY+ VYVGE M+RFV+    LN P+F  LL+++ +E+GY+   G L IPC   +F+ +   L
Sbjct:   25 APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.082e-11
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQK-GVLHIPCHVLVFERVMEALR 440
             P+GY+ VYVGE+++RFV+    LN P F  LL+++ +E+GY+   G L IPC   VF+ +   L 
Sbjct:   17 APKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 2.583e-10
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQK-GVLHIPC 401
            VP+GY+ VYVG++M RF++    LN P F  LLN++ +E+GY+   G L IPC
Sbjct:   25 VPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPC 77
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A2P5VQW8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA39477 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.015e-71
Identity = 133/142 (93.66%), Postives = 133/142 (93.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXX---XVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAA A        AVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAASAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 142
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A0D2S6T7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G269500 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.015e-71
Identity = 133/142 (93.66%), Postives = 133/142 (93.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXX---XVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAA A        AVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAASAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 142
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A1U8JTJ2_GOSHI (auxin-responsive protein SAUR71-like OS=Gossypium hirsutum OX=3635 GN=LOC107909160 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.015e-71
Identity = 133/142 (93.66%), Postives = 133/142 (93.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXX---XVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAA A        AVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAASAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 142
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A1U8LK11_GOSHI (auxin-responsive protein SAUR71-like OS=Gossypium hirsutum OX=3635 GN=LOC107928273 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.182e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 139
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A2P5PV90_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36933 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.102e-66
Identity = 114/139 (82.01%), Postives = 114/139 (82.01%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQ                         SFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQAE-----------------------SFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 116
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A2P5RET1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17746 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.416e-60
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVK---KTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 497
            MKQLIRRLSRVAD S+QY LLRSD+S+    +  RS+ +   +     K   ++VPQG+VPVYVGEEMERFVV+AELLNHPVFVGLLNKSAQEYGYEQKGVL IPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC
Sbjct:    1 MKQLIRRLSRVADSSSQYRLLRSDASNRERATPTRSAESFLIAVSSVKKPGRRSVPQGHVPVYVGEEMERFVVNAELLNHPVFVGLLNKSAQEYGYEQKGVLRIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 138
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A0D2VDM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G141300 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.416e-60
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVK---KTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 497
            MKQLIRRLSRVAD S+QY LLRSD+S+    +  RS+ +   +     K   ++VPQG+VPVYVGEEMERFVV+AELLNHPVFVGLLNKSAQEYGYEQKGVL IPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC
Sbjct:    1 MKQLIRRLSRVADSSSQYRLLRSDASNRERATPTRSAESFLIAVSSVKKPGRRSVPQGHVPVYVGEEMERFVVNAELLNHPVFVGLLNKSAQEYGYEQKGVLRIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 138
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A1R3KI28_9ROSI (Auxin responsive SAUR protein OS=Corchorus olitorius OX=93759 GN=COLO4_07947 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.404e-60
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXX-----XXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCL 500
            MKQLIRRLSRVAD S+QY+LLRSDS++ ++  R+ +  A +      S +   +++VP+G+VPVYVGEEMERFVVSAELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR+LQDLL SFSDDC 
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSDSTTPATRHRNATRRAESFRVAVSSLKKHSRRSVPEGHVPVYVGEEMERFVVSAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRELQDLLSSFSDDCF 141
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A1R3KX31_COCAP (Auxin responsive SAUR protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00436 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.707e-60
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXX-----XXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCL 500
            MKQLIRRLSRVAD S+QY+LLRSDS++ ++  R+ +  A +      S +   +++VP+G+VPVYVGEEMERFVVSAELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR+LQDLL SFSDDC 
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSDSTTPATRHRNATRRAESFRVAVSSLKKHSRRSVPEGHVPVYVGEEMERFVVSAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRELQDLLTSFSDDCF 141
[Close]
BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Match: A0A061FHN2_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao OX=3641 GN=TCM_032976 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.222e-60
Identity = 103/147 (70.07%), Postives = 121/147 (82.31%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXX--------XXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVAD S+QY+LLRS++S+         +   R  S      S + + +++VP+G+VPVYVGEEMERFVV+AELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERV+EALRLGVESRDLQDLLRSFSDDC  ++
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSNASAPTSTTTRHRTVTRRAESFRVAVSSLKKSTRRSVPEGHVPVYVGEEMERFVVNAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVLEALRLGVESRDLQDLLRSFSDDCFLEY 147
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|22534 (AT3G12830.1 | SAUR-like auxin-responsive protein family | Chr3:4079117-4079515 REVERSE LENGTH=132 | 201606)

HSP 1 Score: 154.836 bits (390), Expect = 2.265e-48
Identity = 88/129 (68.22%), Postives = 103/129 (79.84%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVE-SRDLQDLL 476
            MKQLIRRLSRVAD SAQY+LLRSDS   S  S     ++     +     +VP+G+VPVYVG+EMERFVVSAELLNHPVF+GLLN+SAQEYGYEQKGVL IPCHVLVFER+ME+LRLG+    D+QDL+
Sbjct:    1 MKQLIRRLSRVAD-SAQYSLLRSDSQRPSRRSESFLRSSVTRRSKKQTS-SVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLGLPVPIDVQDLI 127
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|3149 (AT1G16510.1 | SAUR-like auxin-responsive protein family | Chr1:5644784-5645227 REVERSE LENGTH=147 | 201606)

HSP 1 Score: 145.206 bits (365), Expect = 2.009e-44
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKK--TVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGV--ESRDLQDLLRSF 485
            MK LIRRLSRVAD S+++++ RS SS  +    HR  A          ++  TVP G+VPVYVGEEMERFVVSAEL+NHP+FVGLLN+SAQEYGY QKGVLHIPCHV+VFERV+E LRLG    S DL++L+ S 
Sbjct:    1 MKHLIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLGGFEGSGDLENLVASL 135
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|8389 (AT1G56150.1 | SAUR-like auxin-responsive protein family | Chr1:21017432-21017764 FORWARD LENGTH=110 | 201606)

HSP 1 Score: 139.428 bits (350), Expect = 1.142e-42
Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR 458
            MKQLIRRLSRVAD S QY+LLRS+S    +                  K  VP+G+VPVYVG EMERFVV+AELLNHPVFV LL +SAQEYGYEQ+GVL IPCHVLVFER++E+LRLG+  R
Sbjct:    1 MKQLIRRLSRVAD-STQYSLLRSESQRGRTKKEKH-------------KSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLGLADR 108
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|12244 (AT1G79130.1 | SAUR-like auxin-responsive protein family | Chr1:29771319-29771723 FORWARD LENGTH=134 | 201606)

HSP 1 Score: 132.88 bits (333), Expect = 1.014e-39
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDD 494
            MK LIRRLSR+AD S+       + S          S++     R  V  +VP G+VPV VGE+ ERFVVSAELLNHPVFVGLLN+SAQEYGY QKGVLHIPC+V VFE+V+E+LR G+ + D  +L+ S S +
Sbjct:    1 MKPLIRRLSRIADSSS----CNRNRSGDIHHPTSTYSSSVFLVKRATVASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGI-ADDTSELIASLSGE 129
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|29417 (AT3G61900.1 | SAUR-like auxin-responsive protein family | Chr3:22925813-22926379 FORWARD LENGTH=136 | 201606)

HSP 1 Score: 69.3218 bits (168), Expect = 4.519e-15
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 3 
Query:  240 KTVPQGYVPVYVG---EEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDD 494
            K VP+G + + VG   EE +RFVV     NHP+F+ LL ++ +EYG+EQKG + IPCHV VF  V          +D+ +  RS  DD
Sbjct:   28 KDVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFRYV----------QDMINRERSLDDD 105
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|38998 (AT5G10990.1 | SAUR-like auxin-responsive protein family | Chr5:3476884-3477330 FORWARD LENGTH=148 | 201606)

HSP 1 Score: 66.6254 bits (161), Expect = 7.139e-14
Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 3 
Query:  234 VKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            V   VP G+V VYVG    RFVV A  LNHP+ + LL K+ +E+G+  +G L IPC   VFE   E++R          + RS    C +D 
Sbjct:   37 VPSDVPSGHVAVYVGRSCRRFVVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFE---ESIRF---------ITRSSRFTCTDDL 116
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|26002 (AT3G43120.1 | SAUR-like auxin-responsive protein family | Chr3:15094644-15095312 FORWARD LENGTH=160 | 201606)

HSP 1 Score: 65.855 bits (159), Expect = 1.508e-13
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALR 440
            VP+GY+ VYVG E+ RF++    L+H +F  LL K+ +EYG++  G L IPC V  F+ +++ + 
Sbjct:   79 VPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLLKCIE 143
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|19959 (AT2G46690.1 | SAUR-like auxin-responsive protein family | Chr2:19180904-19181269 FORWARD LENGTH=121 | 201606)

HSP 1 Score: 64.3142 bits (155), Expect = 2.624e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 3 
Query:  240 KTVPQGYVPVYVG---EEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVES 455
            K VP+G + + VG   EE +RF+V     NHP+F+ LL ++  EYG++QKG + IPCHV  F R ++AL  G  S
Sbjct:   22 KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF-RYVQALIDGERS 95
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|36161 (AT4G34760.1 | SAUR-like auxin-responsive protein family | Chr4:16582471-16582794 REVERSE LENGTH=107 | 201606)

HSP 1 Score: 63.929 bits (154), Expect = 2.689e-13
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALR 440
            VP+G+ PVYVGE   R++V    L HP F  LL ++ +E+G++    L IPC  LVF+ +   +R
Sbjct:   43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107
[Close]
BLAST of Gohir.D08G252700.1 vs. Araport11
Match: gnl|BL_ORD_ID|35428 (AT4G31320.1 | SAUR-like auxin-responsive protein family | Chr4:15193993-15194562 REVERSE LENGTH=189 | 201606)

HSP 1 Score: 65.855 bits (159), Expect = 2.886e-13
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 3 
Query:  246 VPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEAL 437
            +P+GY+ V VG+E +R+ +  E L+H  F  LL ++ +E+G+EQ G+L IPC V VFE +++ +
Sbjct:   80 IPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAVFESILKIM 143
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|823154306|ref|XP_012477023.1| (PREDICTED: auxin-induced protein 6B-like [Gossypium raimondii] >gi|1029063665|ref|XP_016692093.1| PREDICTED: auxin-responsive protein SAUR71-like [Gossypium hirsutum] >gi|763759644|gb|KJB26975.1| hypothetical protein B456_004G269500 [Gossypium raimondii] >gi|1347675942|gb|PPR81234.1| hypothetical protein GOBAR_AA39477 [Gossypium barbadense])

HSP 1 Score: 223.016 bits (567), Expect = 1.208e-71
Identity = 133/142 (93.66%), Postives = 133/142 (93.66%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXX---XVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAA A        AVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAASAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 142
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1028943403|ref|XP_016714951.1| (PREDICTED: auxin-responsive protein SAUR71-like [Gossypium hirsutum])

HSP 1 Score: 222.631 bits (566), Expect = 1.407e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 139
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1050605722|ref|XP_017625416.1| (PREDICTED: auxin-responsive protein SAUR71-like [Gossypium arboreum])

HSP 1 Score: 220.32 bits (560), Expect = 1.482e-70
Identity = 132/142 (92.96%), Postives = 132/142 (92.96%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXX---XVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAA A        AVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRS SDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAASAARAESFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSSSDDCLNDF 142
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1344089639|gb|PPD66190.1| (hypothetical protein GOBAR_DD36933 [Gossypium barbadense])

HSP 1 Score: 208.379 bits (529), Expect = 2.502e-66
Identity = 114/139 (82.01%), Postives = 114/139 (82.01%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVADVSAQ                         SFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
Sbjct:    1 MKQLIRRLSRVADVSAQAE-----------------------SFRVAVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 116
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BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1269937623|ref|XP_022718102.1| (auxin-responsive protein SAUR71-like [Durio zibethinus])

HSP 1 Score: 196.052 bits (497), Expect = 4.678e-61
Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVAD S QY+LLR D++S+      R + +  +      +++VP+G+VPVYVGEEM+RFVVSAELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRS SDDC  DF
Sbjct:    1 MKQLIRRLSRVADSSPQYSLLRPDNTSTRRAQSFRVAVSSLKKQ---ARRSVPEGHVPVYVGEEMKRFVVSAELLNHPVFMGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSLSDDCFVDF 136
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BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|823265879|ref|XP_012465661.1| (PREDICTED: uncharacterized protein LOC105784349 [Gossypium raimondii] >gi|763814514|gb|KJB81366.1| hypothetical protein B456_013G141300 [Gossypium raimondii] >gi|763814515|gb|KJB81367.1| hypothetical protein B456_013G141300 [Gossypium raimondii] >gi|1344111848|gb|PPD85314.1| hypothetical protein GOBAR_DD17746 [Gossypium barbadense])

HSP 1 Score: 193.741 bits (491), Expect = 4.066e-60
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVK---KTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 497
            MKQLIRRLSRVAD S+QY LLRSD+S+    +  RS+ +   +     K   ++VPQG+VPVYVGEEMERFVV+AELLNHPVFVGLLNKSAQEYGYEQKGVL IPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC
Sbjct:    1 MKQLIRRLSRVADSSSQYRLLRSDASNRERATPTRSAESFLIAVSSVKKPGRRSVPQGHVPVYVGEEMERFVVNAELLNHPVFVGLLNKSAQEYGYEQKGVLRIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 138
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BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1137249017|gb|OMP06731.1| (Auxin responsive SAUR protein [Corchorus olitorius])

HSP 1 Score: 193.356 bits (490), Expect = 6.433e-60
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXX-----XXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCL 500
            MKQLIRRLSRVAD S+QY+LLRSDS++ ++  R+ +  A +      S +   +++VP+G+VPVYVGEEMERFVVSAELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR+LQDLL SFSDDC 
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSDSTTPATRHRNATRRAESFRVAVSSLKKHSRRSVPEGHVPVYVGEEMERFVVSAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRELQDLLSSFSDDCF 141
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1137260488|gb|OMP11569.1| (Auxin responsive SAUR protein [Corchorus capsularis])

HSP 1 Score: 193.356 bits (490), Expect = 6.794e-60
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXX-----XXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCL 500
            MKQLIRRLSRVAD S+QY+LLRSDS++ ++  R+ +  A +      S +   +++VP+G+VPVYVGEEMERFVVSAELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESR+LQDLL SFSDDC 
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSDSTTPATRHRNATRRAESFRVAVSSLKKHSRRSVPEGHVPVYVGEEMERFVVSAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRELQDLLTSFSDDCF 141
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BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|590612728|ref|XP_007022464.1| (PREDICTED: auxin-responsive protein SAUR71 [Theobroma cacao] >gi|508722092|gb|EOY13989.1| SAUR-like auxin-responsive protein family [Theobroma cacao])

HSP 1 Score: 193.356 bits (490), Expect = 7.406e-60
Identity = 103/147 (70.07%), Postives = 121/147 (82.31%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXX--------XXXXXXXXXXXXXXXXXXXXVKKTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF 509
            MKQLIRRLSRVAD S+QY+LLRS++S+         +   R  S      S + + +++VP+G+VPVYVGEEMERFVV+AELLNHPVF+GLLNKSAQEYGYEQKGVLHIPCHVLVFERV+EALRLGVESRDLQDLLRSFSDDC  ++
Sbjct:    1 MKQLIRRLSRVADASSQYSLLRSNASAPTSTTTRHRTVTRRAESFRVAVSSLKKSTRRSVPEGHVPVYVGEEMERFVVNAELLNHPVFIGLLNKSAQEYGYEQKGVLHIPCHVLVFERVLEALRLGVESRDLQDLLRSFSDDCFLEY 147
[Close]
BLAST of Gohir.D08G252700.1 vs. NCBI nr
Match: gi|1050594179|ref|XP_017618544.1| (PREDICTED: auxin-responsive protein SAUR71-like [Gossypium arboreum] >gi|1347724600|gb|PPS20453.1| hypothetical protein GOBAR_AA00105 [Gossypium barbadense])

HSP 1 Score: 192.586 bits (488), Expect = 1.161e-59
Identity = 105/138 (76.09%), Postives = 116/138 (84.06%), Query Frame = 3 
Query:   93 MKQLIRRLSRVADVSAQYNLLXXXXXXXXXXXXXXXXXXXXXXXXXXVK---KTVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLHIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 497
            MKQLIRR SRVAD S+QY LLRSD+S+    +  RS+ +   +     K   ++VPQG+VPVYVGEEMERFVV+AELLNHPVFVGLLNKSAQEYGYEQKGVL IPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC
Sbjct:    1 MKQLIRRFSRVADSSSQYRLLRSDTSNRERATPTRSAESFLIAVSSVKKPGRRSVPQGHVPVYVGEEMERFVVNAELLNHPVFVGLLNKSAQEYGYEQKGVLRIPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDC 138
The following BLAST results are available for this feature:
BLAST of Gohir.D08G252700.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-05-23 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs Uniprot Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SAU72_ARATH2.180e-4768.22Auxin-responsive protein SAUR72 OS=Arabidopsis tha... [more]
SAU41_ARATH1.933e-4362.22Auxin-responsive protein SAUR41 OS=Arabidopsis tha... [more]
SAU71_ARATH1.099e-4163.93Auxin-responsive protein SAUR71 OS=Arabidopsis tha... [more]
SAU40_ARATH9.761e-3955.22Auxin-responsive protein SAUR40 OS=Arabidopsis tha... [more]
SAU32_ARATH2.526e-1245.33Auxin-responsive protein SAUR32 OS=Arabidopsis tha... [more]
SAU50_ARATH2.589e-1241.54Auxin-responsive protein SAUR50 OS=Arabidopsis tha... [more]
AXX15_SOYBN3.788e-1243.94Auxin-induced protein X15 OS=Glycine max OX=3847 P... [more]
ARG7_VIGRR1.420e-1143.08Indole-3-acetic acid-induced protein ARG7 OS=Vigna... [more]
AX15A_SOYBN2.082e-1142.42Auxin-induced protein 15A OS=Glycine max OX=3847 P... [more]
AX10A_SOYBN2.583e-1049.06Auxin-induced protein X10A OS=Glycine max OX=3847 ... [more]
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BLAST of Gohir.D08G252700.1 vs. ExPASy TrEMBL
Analysis Date: 2019-06-07 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs Uniprot TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2P5VQW8_GOSBA1.015e-7193.66Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2S6T7_GOSRA1.015e-7193.66Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8JTJ2_GOSHI1.015e-7193.66auxin-responsive protein SAUR71-like OS=Gossypium ... [more]
A0A1U8LK11_GOSHI1.182e-71100.00auxin-responsive protein SAUR71-like OS=Gossypium ... [more]
A0A2P5PV90_GOSBA2.102e-6682.01Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5RET1_GOSBA3.416e-6076.81Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2VDM6_GOSRA3.416e-6076.81Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1R3KI28_9ROSI5.404e-6073.76Auxin responsive SAUR protein OS=Corchorus olitori... [more]
A0A1R3KX31_COCAP5.707e-6073.76Auxin responsive SAUR protein OS=Corchorus capsula... [more]
A0A061FHN2_THECC6.222e-6070.07SAUR-like auxin-responsive protein family OS=Theob... [more]
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BLAST of Gohir.D08G252700.1 vs. Araport11
Analysis Date: 2019-06-07 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|225342.265e-4868.22AT3G12830.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|31492.009e-4462.22AT1G16510.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|83891.142e-4263.93AT1G56150.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|122441.014e-3955.22AT1G79130.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|294174.519e-1543.18AT3G61900.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|389987.139e-1440.22AT5G10990.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|260021.508e-1341.54AT3G43120.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|199592.624e-1345.33AT2G46690.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|361612.689e-1341.54AT4G34760.1 | SAUR-like auxin-responsive protein f... [more]
gnl|BL_ORD_ID|354282.886e-1342.19AT4G31320.1 | SAUR-like auxin-responsive protein f... [more]
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BLAST of Gohir.D08G252700.1 vs. NCBI nr
Analysis Date: 2019-05-23 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|823154306|ref|XP_012477023.1|1.208e-7193.66PREDICTED: auxin-induced protein 6B-like [Gossypiu... [more]
gi|1028943403|ref|XP_016714951.1|1.407e-71100.00PREDICTED: auxin-responsive protein SAUR71-like [G... [more]
gi|1050605722|ref|XP_017625416.1|1.482e-7092.96PREDICTED: auxin-responsive protein SAUR71-like [G... [more]
gi|1344089639|gb|PPD66190.1|2.502e-6682.01hypothetical protein GOBAR_DD36933 [Gossypium barb... [more]
gi|1269937623|ref|XP_022718102.1|4.678e-6174.10auxin-responsive protein SAUR71-like [Durio zibeth... [more]
gi|823265879|ref|XP_012465661.1|4.066e-6076.81PREDICTED: uncharacterized protein LOC105784349 [G... [more]
gi|1137249017|gb|OMP06731.1|6.433e-6073.76Auxin responsive SAUR protein [Corchorus olitorius... [more]
gi|1137260488|gb|OMP11569.1|6.794e-6073.76Auxin responsive SAUR protein [Corchorus capsulari... [more]
gi|590612728|ref|XP_007022464.1|7.406e-6070.07PREDICTED: auxin-responsive protein SAUR71 [Theobr... [more]
gi|1050594179|ref|XP_017618544.1|1.161e-5976.09PREDICTED: auxin-responsive protein SAUR71-like [G... [more]
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InterPro
Analysis Name: InterProScan analysis for Tx_JGI v1.1 Gossypium hirsutum proteins
Date Performed: 2017-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 23..115
e-value: 3.1E-29
score: 100.9
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR31374:SF80AUXIN-RESPONSIVE PROTEIN SAUR40-RELATEDcoord: 1..122

Sequences
The following sequences are available for this feature:

mRNA sequence

>Gohir.D08G252700.1_Tx-JGI_v1.1 ID=Gohir.D08G252700.1_Tx-JGI_v1.1; Name=Gohir.D08G252700.1; organism=Gossypium hirsutum; type=mRNA; length=597bp
ccctctccttttcctctcattAATCTCTTTTTACACTCTGGGTTCTCttt
tctttttctattttgattttgattttgcattATTATCACCAAATGAAGCA
ACTCATCCGCCGTCTTTCCCGCGTCGCCGACGTTTCCGCCCAGTACAAcc
tcctccgctccgactcttcctcctcttcttccGGTAGCCGCCATCGTTCT
TCCGCCGCTAGGGCTGAATCTTTCCGTGTGGCGGTTAAAAAGACGGTGCC
TCAAGGTTACGTTCCGGTTTACGTAGGGGAAGAGATGGAGCGGTTCGTTG
TGAGTGCGGAGTTGCTGAATCACCCGGTTTTCGTCGGCTTGCTTAATAAA
TCGGCTCAGGAATACGGGTATGAACAAAAAGGGGTACTTCATATTCCGTG
TCACGTACTGGTTTTTGAAAGGGTTATGGAAGCGTTAAGACTTGGGGTTG
AGTCACGTGACTTACAGGATCTACTCCGGTCATTCTCCGATGACTGTTTA
AATGATTTTTAGACCGGTGAAACGACAAAAAACGATGTCGTCTTTTTTCA
TGTAAATATATTATATTAAAGGGAAAAAAAGGGAAGAAATGTAGGGG
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protein sequence of Gohir.D08G252700.1

>Gohir.D08G252700.1-protein_Tx-JGI_v1.1 ID=Gohir.D08G252700.1-protein_Tx-JGI_v1.1; Name=Gohir.D08G252700.1; organism=Gossypium hirsutum; type=polypeptide; length=139bp
MKQLIRRLSRVADVSAQYNLLRSDSSSSSSGSRHRSSAARAESFRVAVKK
TVPQGYVPVYVGEEMERFVVSAELLNHPVFVGLLNKSAQEYGYEQKGVLH
IPCHVLVFERVMEALRLGVESRDLQDLLRSFSDDCLNDF
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mRNA from alignment at D08:68049262..68049858-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gohir.D08G252700.1_Tx-JGI_v1.1 ID=Gohir.D08G252700.1_Tx-JGI_v1.1; Name=Gohir.D08G252700.1; organism=Gossypium hirsutum; type=mRNA; length=597bp; location=Sequence derived from: D08:68049262..68049858- (Gossypium hirsutum
CCCTCTCCTTTTCCTCTCATTAATCTCTTTTTACACTCTGGGTTCTCTTT
TCTTTTTCTATTTTGATTTTGATTTTGCATTATTATCACCAAATGAAGCA
ACTCATCCGCCGTCTTTCCCGCGTCGCCGACGTTTCCGCCCAGTACAACC
TCCTCCGCTCCGACTCTTCCTCCTCTTCTTCCGGTAGCCGCCATCGTTCT
TCCGCCGCTAGGGCTGAATCTTTCCGTGTGGCGGTTAAAAAGACGGTGCC
TCAAGGTTACGTTCCGGTTTACGTAGGGGAAGAGATGGAGCGGTTCGTTG
TGAGTGCGGAGTTGCTGAATCACCCGGTTTTCGTCGGCTTGCTTAATAAA
TCGGCTCAGGAATACGGGTATGAACAAAAAGGGGTACTTCATATTCCGTG
TCACGTACTGGTTTTTGAAAGGGTTATGGAAGCGTTAAGACTTGGGGTTG
AGTCACGTGACTTACAGGATCTACTCCGGTCATTCTCCGATGACTGTTTA
AATGATTTTTAGACCGGTGAAACGACAAAAAACGATGTCGTCTTTTTTCA
TGTAAATATATTATATTAAAGGGAAAAAAAGGGAAGAAATGTAGGGG
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Coding sequence (CDS) from alignment at D08:68049262..68049858-

>Gohir.D08G252700.1_Tx-JGI_v1.1 ID=Gohir.D08G252700.1_Tx-JGI_v1.1; Name=Gohir.D08G252700.1; organism=Gossypium hirsutum; type=CDS; length=420bp; location=Sequence derived from: D08:68049262..68049858- (Gossypium hirsutum
ATGAAGCAACTCATCCGCCGTCTTTCCCGCGTCGCCGACGTTTCCGCCCA
GTACAACCTCCTCCGCTCCGACTCTTCCTCCTCTTCTTCCGGTAGCCGCC
ATCGTTCTTCCGCCGCTAGGGCTGAATCTTTCCGTGTGGCGGTTAAAAAG
ACGGTGCCTCAAGGTTACGTTCCGGTTTACGTAGGGGAAGAGATGGAGCG
GTTCGTTGTGAGTGCGGAGTTGCTGAATCACCCGGTTTTCGTCGGCTTGC
TTAATAAATCGGCTCAGGAATACGGGTATGAACAAAAAGGGGTACTTCAT
ATTCCGTGTCACGTACTGGTTTTTGAAAGGGTTATGGAAGCGTTAAGACT
TGGGGTTGAGTCACGTGACTTACAGGATCTACTCCGGTCATTCTCCGATG
ACTGTTTAAATGATTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin