CotAD_46445, CotAD_46445_BGI-AD1_v1.0 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1029040583|ref|XP_016684039.1| (PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Gossypium hirsutum]) HSP 1 Score: 384.415 bits (986), Expect = 4.828e-135 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|823219931|ref|XP_012442681.1| (PREDICTED: VQ motif-containing protein 8, chloroplastic [Gossypium raimondii] >gi|763794244|gb|KJB61240.1| hypothetical protein B456_009G347500 [Gossypium raimondii]) HSP 1 Score: 377.481 bits (968), Expect = 2.109e-132 Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQT APPPS PP+KNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTAAPPPSRPPHKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1029012596|ref|XP_016670188.1| (PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Gossypium hirsutum] >gi|1050620917|ref|XP_017633279.1| PREDICTED: VQ motif-containing protein 8, chloroplastic [Gossypium arboreum] >gi|1347709051|gb|PPS07107.1| hypothetical protein GOBAR_AA13536 [Gossypium barbadense]) HSP 1 Score: 345.125 bits (884), Expect = 1.671e-119 Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSH+R PRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQT APPPS P +KNKIITRQEDNETSSAIT+DVCSSYVATTVSP+SQFL DMPLFTPSSTDFFCS RPPAQKFAD+GTLNSP+LLEFMKGLPDY
Sbjct: 1 MSSLNSHDRVPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTAAPPPSRPSHKNKIITRQEDNETSSAITDDVCSSYVATTVSPISQFLVDMPLFTPSSTDFFCSTRPPAQKFADVGTLNSPNLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1344115616|gb|PPD88789.1| (hypothetical protein GOBAR_DD14272 [Gossypium barbadense]) HSP 1 Score: 278.1 bits (710), Expect = 2.062e-93 Identity = 151/187 (80.75%), Postives = 153/187 (81.82%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQ P +GEVVKQT APPPS PPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMS+FLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQDP-------------------------------NGEVVKQTAAPPPSRPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSRFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 156
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1269968277|ref|XP_022734518.1| (VQ motif-containing protein 8, chloroplastic [Durio zibethinus]) HSP 1 Score: 213.386 bits (542), Expect = 4.933e-67 Identity = 127/222 (57.21%), Postives = 148/222 (66.67%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPS----SSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSD--GEVV----KQTTAPPPSPPPYKNKIIT-----RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS +NSHER PR++LM+NG+RPSPL I+K SH IQKPS S +A PKQQQ RQGP+IIYT+SPKIIHTQARDFMALVQKLTG SRSD E ++ A S P + I T RQEDN++SSA+T N+V SSYV TVSP + F AD+PLFTP+S FFCSPR P KFAD +G NSP+LLEFMKGLPDY
Sbjct: 1 MSPVNSHERPPRRDLMINGLRPSPLTISKDSHFIQKPSAGVMSQTAAARPKQQQ--RQGPVIIYTYSPKIIHTQARDFMALVQKLTGFSRSDEVNETAPSRPRKNKAKDNSLSPLEGDINTKLAANRQEDNDSSSALTDENGCFSVAGGDVNNVSSSYVPMTVSPTNPFFADIPLFTPNSAAFFCSPR-PVYKFADNAIVSPSLGNSNSPTLLEFMKGLPDY 219
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1137249616|gb|OMP07091.1| (VQ motif-containing protein [Corchorus olitorius]) HSP 1 Score: 201.445 bits (511), Expect = 9.240e-63 Identity = 117/210 (55.71%), Postives = 132/210 (62.86%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATT----------------VSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS N HER + +M+NG+RPSPLKINK SH+IQKP + PKQQQ QRQGP+IIYTHSPKIIHTQARDFMALVQKLTGLSRSD EV + P EDN++SSA+T D SS +P F AD+PLFTP+S DFFCSPR P KFAD +G LNSPSLLEFMKGLPDY
Sbjct: 1 MSPANPHERGLKPGMMINGLRPSPLKINKDSHLIQKPVPA-----PKQQQHQRQGPVIIYTHSPKIIHTQARDFMALVQKLTGLSRSDNEVNDSAPSKP-------------TEDNDSSSALTEDNGSSGGVDVNNKPQTRTQTQTTNIMSTPPVPFFADVPLFTPNSADFFCSPR-PVYKFADNSIMSPGLGNLNSPSLLEFMKGLPDY 191
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1137225039|gb|OMO89738.1| (VQ motif-containing protein [Corchorus capsularis]) HSP 1 Score: 189.504 bits (480), Expect = 4.688e-58 Identity = 120/208 (57.69%), Postives = 135/208 (64.90%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQ-RQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSS-------YVATT------VSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS N HERA + +M+NG+RPSPLKINK SH+IQKP + PKQQQQQ R GP+IIYTHSPKIIHTQARDFMALVQKLTGLSRSD EV + P EDN++SSA+T D SS VA T +P F D+PLFTP+S DFFCSPR P KFAD +G LNSPSLLEFMKGLPDY
Sbjct: 1 MSPTNPHERALKPGMMINGLRPSPLKINKDSHLIQKPVPA-----PKQQQQQQRHGPVIIYTHSPKIIHTQARDFMALVQKLTGLSRSDNEVNDSAPSKP-------------TEDNDSSSALTEDNGSSGGVDVNNKVAQTQSTNIITTPPVPFFGDVPLFTPNSADFFCSPR-PVYKFADNSIMSPGLGNLNSPSLLEFMKGLPDY 189
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1063469680|ref|XP_007044310.2| (PREDICTED: VQ motif-containing protein 8, chloroplastic [Theobroma cacao]) HSP 1 Score: 186.422 bits (472), Expect = 2.418e-56 Identity = 121/225 (53.78%), Postives = 141/225 (62.67%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSS---SSALHHPKQQQQQRQ---GPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIIT------------RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS +NSHER PR++LM+NG+RPSPLKINK SH IQK S S A P + Q Q+Q GP+IIYTHSPKIIHTQARDFMALVQKLTG SRSD EV K + N I + RQEDN++SSA+T N+V S + SP + F AD+ LFTP+S DFFCSPR P KFAD +G L+SPSLLEFMKGLPDY
Sbjct: 1 MSPVNSHERPPRRDLMINGLRPSPLKINKDSHFIQKSSGLVLSQAAAAPLKNQYQQQQRQGPIIIYTHSPKIIHTQARDFMALVQKLTGFSRSD-EVTKTAPSKLRKHKAKDNSISSLEGNISMELARNRQEDNDSSSALTDENGGFGVGGGDVNNVSLSSAPSITSPPNPFFADIALFTPNSVDFFCSPR-PVYKFADNEIVSPTLG-LSSPSLLEFMKGLPDY 222
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|508708245|gb|EOY00142.1| (VQ motif-containing protein, putative, partial [Theobroma cacao]) HSP 1 Score: 185.652 bits (470), Expect = 1.953e-55 Identity = 121/225 (53.78%), Postives = 141/225 (62.67%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSS---SSALHHPKQQQQQRQ---GPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIIT------------RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS +NSHER PR++LM+NG+RPSPLKINK SH IQK S S A P + Q Q+Q GP+IIYTHSPKIIHTQARDFMALVQKLTG SRSD EV K + N I + RQEDN++SSA+T N+V S + SP + F AD+ LFTP+S DFFCSPR P KFAD +G L+SPSLLEFMKGLPDY
Sbjct: 52 MSPVNSHERPPRRDLMINGLRPSPLKINKDSHFIQKSSGLVLSQAAAAPLKNQYQQQQRQGPIIIYTHSPKIIHTQARDFMALVQKLTGFSRSD-EVTKTAPSKLRKHKAKDNSISSLEGNISMELARNRQEDNDSSSALTDENGGFGVGGGDVNNVSLSSAPSITSPPNPFFADIALFTPNSVDFFCSPR-PVYKFADNEIVSPTLG-LSSPSLLEFMKGLPDY 273
BLAST of CotAD_46445 vs. NCBI nr
Match: gi|1204931270|ref|XP_021298879.1| (VQ motif-containing protein 8, chloroplastic [Herrania umbratica]) HSP 1 Score: 182.57 bits (462), Expect = 8.609e-55 Identity = 123/226 (54.42%), Postives = 144/226 (63.72%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPS-------SSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIIT------------RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS ++ H R PR++LM+NG+RPSPLKINK SH IQK S +++ L H +QQQQQRQGP+IIYTHSPKIIHTQARDFMALVQKLTG SRSD EV K + N I + RQEDN++SSA+T N+V S V SP + F AD+ LFTP+S DFFCSPR P KFAD +G LNSPSLLEFMKGLPDY
Sbjct: 1 MSPVDFHARPPRRDLMINGLRPSPLKINKNSHFIQKSSGLVVSQAAAAPLKH-QQQQQQRQGPVIIYTHSPKIIHTQARDFMALVQKLTGFSRSD-EVTKTAPSKLRKDKAKGNSISSLEGNISMELARNRQEDNDSSSALTDENGGFGVGGDDVNNVSLSSVPPITSPPNPFFADIGLFTPNSVDFFCSPR-PVYKFADNEIVSPALG-LNSPSLLEFMKGLPDY 222
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30475841 (transcript=Glyma.10G273300.1 locus=Glyma.10G273300 ID=Glyma.10G273300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 131.724 bits (330), Expect = 5.166e-31 Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 7 HERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKII--TRQEDNETSSA---ITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-----MGTLNSPSLLEFMKGLPDY 187
HE+ P+K ++NG RPSPL INK SH+I+K + L P+ P+IIYT SPKIIHT+A+DFMALVQ+LTG S S + + + + + + + NETSSA + ++ S P + ADMPLFTP+S+DFFCS K++D +G+L SPS LEFMK LP+Y
Sbjct: 11 HEQQPKK--VINGPRPSPLMINKDSHMIRK---ETKLQRPQRI-----NPIIIYTESPKIIHTKAKDFMALVQRLTGRSSSTNDNLSTASLPQEGSENFGSSLSDGSNYNSNETSSALRRVGENLVESGAIVQHGPSNLDFADMPLFTPNSSDFFCSSGSSVYKYSDSPYGVLGSLISPSGLEFMKELPEY 191
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30519873 (transcript=Glyma.20G116600.1 locus=Glyma.20G116600 ID=Glyma.20G116600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 100.908 bits (250), Expect = 1.035e-21 Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 56 PLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKII--TRQEDNETSSAI---TNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-----MGTLNSPSLLEFMKGLPDY 187
P+IIYT SPK+IHT+A+DFMALVQ+LTG S ++ + + + + + + NETSSA+ ++ S P DMPL TP+S+DFFCS R K++D +G+L SPS LEFMK LP+Y
Sbjct: 16 PIIIYTESPKVIHTKAKDFMALVQRLTGRSSTNDNLSTTASLPQEGSENFGSSLSDGSNYNSNETSSALRRFGENLVESGAIIQHGPSHLDFVDMPLSTPNSSDFFCSSRSSVYKYSDSPYGVLGSLISPSGLEFMKELPEY 157
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30485199 (transcript=Glyma.09G183700.1 locus=Glyma.09G183700 ID=Glyma.09G183700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 85.1149 bits (209), Expect = 6.337e-17 Identity = 70/201 (34.83%), Postives = 92/201 (45.77%), Query Frame = 1
Query: 17 MNGIRPSP-LKINKGSHVIQKPSS-----------------------SSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQ------------------TTAXXXXXXXYKNKIITRQEDNETSSAITND-VCSSYVATTVS-------------PMSQFLADMPLFTPSSTDFFCSPRP 161
+NG+ SP LKINK SH I+K SS +S P+ P+IIYTHSPK+IHTQ +DFM+LVQKLTGLSRS GE ++ KN I + EDNETSS IT + CSS V+ ++ ++ + P+ PSS +F CS +P
Sbjct: 21 INGLLSSPPLKINKESHFIKKSSSSSSSSSSSTSSSLVNSAMTRAMPTSLYKQPQQHHH----PVIIYTHSPKVIHTQPKDFMSLVQKLTGLSRS-GEEKEEGGNQSPQQLSNQEFGGDVAAVVGDKESDRKNVNIVKNEDNETSSVITEENNCSSVGENQVNSCFMTGEPSMLEPKLNPYVTNFPVMAPSSAEFVCSSQP 216
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30493899 (transcript=Glyma.07G092500.1 locus=Glyma.07G092500 ID=Glyma.07G092500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 81.2629 bits (199), Expect = 7.679e-16 Identity = 51/133 (38.35%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 56 PLIIYTHSPKIIHTQARDFMALVQKLTGLSRSD---GEVVKQTTAXXXXXXXYKNKIIT---------RQEDNETSSAITND--VCSSYVATTVSP-------------MSQFLADMPLFTPSSTDFFCSPRP 161
P+IIYTHSPK+IHTQ +DFM+LVQKLTGLSRSD E T + + + EDNETSS IT + CSS V+ ++ ++ ++P+ PSS +F CS +P
Sbjct: 82 PVIIYTHSPKVIHTQPKDFMSLVQKLTGLSRSDEKEDEDGGNPTPQQPSNQKFGGDVAVAVGDKESGRKNEDNETSSVITTEENYCSSVGENQVNSCFMMGEPSMLEPRLNPYVTNLPVLAPSSAEFACSSQP 214
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30551544 (transcript=Glyma.06G124400.1 locus=Glyma.06G124400 ID=Glyma.06G124400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 72.4034 bits (176), Expect = 4.145e-13 Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 8 ERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
ER+PR+EL + G RP+PL+INK SH I+KP A P+IIYT SPK+IHT DFM LVQ+LTG
Sbjct: 12 ERSPRRELQLQGPRPTPLRINKDSHKIKKP--PLAPQPSHPHQPPPRQPIIIYTVSPKVIHTTPSDFMNLVQRLTG 85
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30490313 (transcript=Glyma.04G239400.1 locus=Glyma.04G239400 ID=Glyma.04G239400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 72.0182 bits (175), Expect = 5.740e-13 Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 8 ERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
ER+PR+EL + G RP+PL+INK SH I+KP + +IIYT SPK+IHT DFM LVQ+LTG
Sbjct: 30 ERSPRRELQLQGPRPTPLRINKDSHKIKKPPLAPQQPSHPHQPPPRQP-IIIYTVSPKVIHTTPSDFMNLVQRLTG 104
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30540089 (transcript=Glyma.08G147600.1 locus=Glyma.08G147600 ID=Glyma.08G147600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 71.2478 bits (173), Expect = 9.312e-13 Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 12 RKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKIITRQEDNET 118
+KEL + G RP PL+++K SH I+KP H P P+IIY SPK++H A DFM +VQ+LTG S D + + + K+ EDN+
Sbjct: 19 KKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAALPEHRK-PVIIYAVSPKVLHVPAGDFMNVVQRLTGPSSGDVSPAARLASIERTSPSEREKV--HSEDNDV 122
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30537131 (transcript=Glyma.08G041900.1 locus=Glyma.08G041900 ID=Glyma.08G041900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 66.2402 bits (160), Expect = 2.826e-11 Identity = 52/144 (36.11%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 25 LKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD 168
LK+N+ SH+I+K SSSS P+IIYTH PK+IHT AR+FM LVQKLTGL R+D E K R+E+ + + A + + S V + + +F +DF CS P FAD
Sbjct: 8 LKMNRESHLIRKSSSSSLS-----KAQQQRPPVIIYTHPPKVIHTHARNFMELVQKLTGLYRTDPE------DNGGGEEVLKPPTPPRKEEPKANEAASPEEVESSCYNCVD----YAKNYAVF---ESDFLCSNNKPLLTFAD 133
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30524675 (transcript=Glyma.05G190000.1 locus=Glyma.05G190000 ID=Glyma.05G190000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 62.3882 bits (150), Expect = 4.435e-10 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 12 RKELMMNGIRPSPLKINKGSHVIQKPS-SSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLS 85
+KEL + G RP PL+++K SH I+KP +A P+IIYT SPK++H DFM +VQ+LTG S
Sbjct: 19 KKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAPPPPPEQRKPVIIYTVSPKVLHVTVSDFMNVVQRLTGPS 93
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Match: pacid=30532018 (transcript=Glyma.14G124800.1 locus=Glyma.14G124800 ID=Glyma.14G124800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1) HSP 1 Score: 60.4622 bits (145), Expect = 1.380e-9 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 9 RAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
R+P++EL G RP+PL+INK SH I++ + AL P+ +IIYT SPK+IHT DFM+LVQ+LTG
Sbjct: 10 RSPKRELQ--GPRPTPLRINKDSHKIKR--TPVALPQPQPPPRQP---VIIYTVSPKVIHTTPSDFMSLVQRLTG 77
BLAST of CotAD_46445 vs. Vitis vinifera
Match: pacid=17817726 (transcript=GSVIVT01001661001 locus=GSVIVG01001661001 ID=GSVIVT01001661001.Genoscope12X annot-version=Genoscope.12X) HSP 1 Score: 56.9954 bits (136), Expect = 4.434e-9 Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 21 RPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGL 84
RP+PLK+ K SH I+KP +IIYT SPKIIHTQ +FM LVQ+LTGL
Sbjct: 32 RPTPLKVRKDSHKIRKPPVVPQPQAQHPPP------VIIYTVSPKIIHTQPSEFMTLVQRLTGL 89
BLAST of CotAD_46445 vs. Cacao Genome Database
Match: pacid=27462928 (transcript=Thecc1EG009707t1 locus=Thecc1EG009707 ID=Thecc1EG009707t1.CGDv1.1 annot-version=v1.1) HSP 1 Score: 187.963 bits (476), Expect = 3.208e-48 Identity = 118/225 (52.44%), Postives = 137/225 (60.89%), Query Frame = 1
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSS---SSALHHP---KXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKIIT------------RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS +NSHER PR++LM+NG+RPSPLKINK SH IQK S S A P + GP+IIYTHSPKIIHTQARDFMALVQKLTG SRSD EV K + N I + RQEDN++SSA+T N+V S + SP + F AD+ LFTP+S DFFCSPR P KFAD +G L+SPSLLEFMKGLPDY
Sbjct: 52 MSPVNSHERPPRRDLMINGLRPSPLKINKDSHFIQKSSGLVLSQAAAAPLKNQYQQQQRQGPIIIYTHSPKIIHTQARDFMALVQKLTGFSRSD-EVTKTAPSKLRKHKAKDNSISSLEGNISMELARNRQEDNDSSSALTDENGGFGVGGGDVNNVSLSSAPSITSPPNPFFADIALFTPNSVDFFCSPR-PVYKFADNEIVSPTLG-LSSPSLLEFMKGLPDY 273
BLAST of CotAD_46445 vs. Cacao Genome Database
Match: pacid=27447734 (transcript=Thecc1EG012360t1 locus=Thecc1EG012360 ID=Thecc1EG012360t1.CGDv1.1 annot-version=v1.1) HSP 1 Score: 85.1149 bits (209), Expect = 2.953e-17 Identity = 68/190 (35.79%), Postives = 93/190 (48.95%), Query Frame = 1
Query: 12 RKELMMNG----IRPSPLKINKGSHVIQKPSSSSALHH----------PKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVK--------------------QTTAXXXXXXXYKNKIITRQEDNETSSAITND-----VCSSYV-ATTVSPMSQFLADMPLFTPSSTDFFCSPRP 161
+K+ NG + P PLKINK SH+I+K SSSS+ K P+IIYTHSPK+IHT +DFMALVQKLTGLSRS+ + Q ++ +DN++SS IT++ V S +V P + FL ++P+FTP+S DF C +P
Sbjct: 16 KKDTTSNGNAAALCPPPLKINKDSHLIRKSSSSSSSSSAASSLGVTCTAKPPHQQQRHPVIIYTHSPKVIHTHPKDFMALVQKLTGLSRSEDDNHHNHHHHHHHHHHNNNHHDAPHQPKVDNGAASAEEDSKRIINDDNDSSSVITDENGEGQVNSCFVPPLFDPPPAPFLTNIPVFTPNSADFLCVNQP 205
BLAST of CotAD_46445 vs. Cacao Genome Database
Match: pacid=27434880 (transcript=Thecc1EG001406t1 locus=Thecc1EG001406 ID=Thecc1EG001406t1.CGDv1.1 annot-version=v1.1) HSP 1 Score: 62.7734 bits (151), Expect = 1.794e-10 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 12 RKELMMNGIRPSPLKINKGSHVIQKP----SSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLS----RSDGEV 91
+++L + G RP+PLK++K SH I+KP S ++ P+IIY SPK+IH + DFM++VQ+ TGLS DG+V
Sbjct: 13 KRQLQIQGPRPTPLKVSKDSHKIKKPPHPPSHAAGPAAAAAADQRRREPVIIYAVSPKVIHAEESDFMSIVQRYTGLSSGNFSGDGDV 100
BLAST of CotAD_46445 vs. Cacao Genome Database
Match: pacid=27457546 (transcript=Thecc1EG035487t1 locus=Thecc1EG035487 ID=Thecc1EG035487t1.CGDv1.1 annot-version=v1.1) HSP 1 Score: 56.225 bits (134), Expect = 1.597e-8 Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 9 RAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKL 81
++PRKEL G RP+PLK+ K S+ I+KP + + P+IIYT SPK+IHT DFM LVQ+L
Sbjct: 10 KSPRKELQ--GPRPAPLKVRKDSYKIKKPPLAPQPV--QQPPAQIRPPVIIYTVSPKVIHTNPSDFMDLVQRL 78
BLAST of CotAD_46445 vs. Rice Genome Annotation Project
Match: protein|VQ (domain containing protein, putative, expressed) HSP 1 Score: 61.6178 bits (148), Expect = 5.039e-10 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
+SS ++ +R +EL G RP+PLK+ K SH I+K L P +IIYT SPK++H A DFM++VQ+LTG
Sbjct: 5 LSSPSASQRGGGREL--QGPRPAPLKVRKESHKIRKQEPVQQLRQP----------VIIYTMSPKVVHANAADFMSVVQRLTG 75
BLAST of CotAD_46445 vs. Rice Genome Annotation Project
Match: protein|VQ (domain containing protein, putative, expressed) HSP 1 Score: 52.7582 bits (125), Expect = 2.789e-7 Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 1
Query: 17 MNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGP------------LIIYTHSPKIIHTQARDFMALVQKLTG 83
+ G RP L ++K SH ++KP + P+ GP +IIY SPK+IHT+ +FMALVQ+LTG
Sbjct: 15 LQGPRPPRLAVSKDSHKVRKPP---VVPQPRGGGGVVAGPSRPQQQQQPRAPVIIYDASPKVIHTRPSEFMALVQRLTG 90
BLAST of CotAD_46445 vs. Rice Genome Annotation Project
Match: protein|VQ (domain containing protein, putative, expressed) HSP 1 Score: 51.6026 bits (122), Expect = 5.302e-7 Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 11 PRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXX------XXXXGPLIIYTHSPKIIHTQARDFMALVQKLT 82
PR++L G RP L + SH I+KPSS +A + P+IIY SPKIIH + +FMALVQ+LT
Sbjct: 25 PRRQL--QGPRPPRLNVRMESHAIKKPSSGAAAAAAQAQARREQQQPPPRAPVIIYDASPKIIHAKPNEFMALVQRLT 100
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=26978594 (transcript=Potri.010G123700.1 locus=Potri.010G123700 ID=Potri.010G123700.1.v3.0 annot-version=v3.0) HSP 1 Score: 122.094 bits (305), Expect = 1.943e-28 Identity = 93/220 (42.27%), Postives = 114/220 (51.82%), Query Frame = 1
Query: 17 MNGIRPSPLKINKGSHVIQKPSSSS-----------------ALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSD---------------GEVVKQTTAXXXXXXXYKNKIITRQEDNETSSAITNDVC------SSYVATTVSPM-----SQFLADMPLFTPSSTDFFCSPRP----PAQKFAD--MGTLNSPSLLEFMKGLPDY 187
+NG RPSPLKINK SH+I+K SSSS + P+IIYTHSPK+IHTQA+DFMALVQ LTGLSRS+ G V K A K+ DN++SS T + C + V VSP + + AD+PLFTP+S+DFF SPRP P FA MG SPS+LEF+KGLP+Y
Sbjct: 13 INGQRPSPLKINKESHLIRKSSSSSSASTSNSSSSVSIIDPPVFGVKQQQQHQKNQPVIIYTHSPKVIHTQAKDFMALVQNLTGLSRSNNQEMAPPAQQGQDHQGVVSKGLKAGRGNGNGRKH---VGHGDNDSSSISTEENCHGAAAAAGGVDIVVSPFLKPPNAPYFADVPLFTPTSSDFFFSPRPVFRCPDSVFASPKMGNPISPSVLEFIKGLPEY 229
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27017190 (transcript=Potri.015G046600.1 locus=Potri.015G046600 ID=Potri.015G046600.1.v3.0 annot-version=v3.0) HSP 1 Score: 87.8113 bits (216), Expect = 3.961e-18 Identity = 62/177 (35.03%), Postives = 89/177 (50.28%), Query Frame = 1
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXG------PLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYK------NKIITRQEDNETSSAITNDVCSSYVATT----VSPMSQFLADMPLFTPSSTDFFCSPRP 161
MS N H+ + + M P PLK+NK SH+I+K S P+IIYTHSPKIIHT +DFMALVQKLTGLS+S E + + Y+ NK + +DNE+SSAIT+ + + ++ ++P+FTP+ +F C+ +P
Sbjct: 1 MSPANLHDHKAKTKDMY---PPPPLKVNKDSHMIKKSFPSPPSSSSSSASSLAVTGPIKPHPVIIYTHSPKIIHTNPKDFMALVQKLTGLSQS--EDIDPSAPQVRKENGYRVVAKEENKKVKINDDNESSSAITDHENYGSIGDRGQCFMPRHPNYMTNIPIFTPNLAEFLCANQP 172
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27049202 (transcript=Potri.012G055900.1 locus=Potri.012G055900 ID=Potri.012G055900.1.v3.0 annot-version=v3.0) HSP 1 Score: 77.0258 bits (188), Expect = 7.924e-15 Identity = 52/152 (34.21%), Postives = 72/152 (47.37%), Query Frame = 1
Query: 22 PSPLKINKGSHVIQKPSSSSALHHPKXXXXX------------XXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAXXXXXXXYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRP 161
P PLK+NK SH+I+K S S+ P+IIYTHSPKIIHT +DFM+LVQKLTGLSRS+ + Q + + + NE S ++ P + L +P+F P+S F C+ +P
Sbjct: 16 PPPLKVNKDSHMIKKSSPPSSSSSSSSSSASSSLGIVGPVKPPQRHPVIIYTHSPKIIHTNPKDFMSLVQKLTGLSRSEEDPAPQVKRENGGRREENKRKVKINDGNEGGLGDGQVQYSCFMQPLFQPPN--LNYIPVFAPNSAGFLCANQP 165
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27030554 (transcript=Potri.005G057800.1 locus=Potri.005G057800 ID=Potri.005G057800.1.v3.0 annot-version=v3.0) HSP 1 Score: 62.7734 bits (151), Expect = 1.266e-10 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 14 ELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSD 88
E+ + G RPS L++++GSH I+KP P+IIY SPKIIH + +FMA+VQ+LTGLS +D
Sbjct: 26 EIQIQGPRPSALRLHQGSHKIKKP-----------PLPPQRQPVIIYAVSPKIIHAEESNFMAVVQRLTGLSSAD 89
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27031089 (transcript=Potri.005G189300.1 locus=Potri.005G189300 ID=Potri.005G189300.1.v3.0 annot-version=v3.0) HSP 1 Score: 61.6178 bits (148), Expect = 2.916e-10 Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 9 RAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGP---LIIYTHSPKIIHTQARDFMALVQKLTG 83
R+PRKEL G RP LKI K SH I+KP + H K P +IIYT SPK+IHT DFM LVQ+LTG
Sbjct: 10 RSPRKELQ--GPRPPALKIRKDSHKIKKPPVAPQPSHQKPQNQQQIQPRPPVIIYTLSPKVIHTNPNDFMTLVQRLTG 85
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27021882 (transcript=Potri.002G070600.1 locus=Potri.002G070600 ID=Potri.002G070600.1.v3.0 annot-version=v3.0) HSP 1 Score: 56.225 bits (134), Expect = 1.205e-8 Identity = 37/78 (47.44%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 9 RAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGP---LIIYTHSPKIIHTQARDFMALVQKLTG 83
R+PRKEL G RP LKI K SH I+KP + + +IIYT SPK+IHT DFM LVQ+LTG
Sbjct: 41 RSPRKELQ--GPRPPALKIRKDSHKIRKPPVAPQPFQQQPQNQPPTQQRPPVIIYTVSPKVIHTNPNDFMTLVQRLTG 116
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Match: pacid=27015626 (transcript=Potri.007G110100.1 locus=Potri.007G110100 ID=Potri.007G110100.1.v3.0 annot-version=v3.0) HSP 1 Score: 55.8398 bits (133), Expect = 1.627e-8 Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 1
Query: 14 ELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKXXXXXXXGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRS----DGEVVKQTTAXXXXXXXYKNKIITRQEDNETSS-----AITNDVCSSYVATTVSPMSQFLADMP--LFTPSSTD 154
+L + G RPS LK+N+ SH I+KP ++IY SPK IHT+ +FMA+VQ+LTGLS DG V A + +TR + + SS + +V + + +SP L +P F+P+STD
Sbjct: 85 QLQIQGPRPSALKLNQDSHKIKKPPPPPPKQP-----------VVIYAVSPKTIHTEESNFMAVVQRLTGLSSGDFFHDGSV--SPAARLAATEKASPRELTRPSNTQDSSDDDLMEMLKEVGAGQIPGILSPAPAMLPPVPTGFFSPASTD 223
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A1U8J765_GOSHI (VQ motif-containing protein 8, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107902349 PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 4.056e-135 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A0D2UYA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G347500 PE=4 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 1.772e-132 Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQT APPPS PP+KNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTAAPPPSRPPHKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A2P5XUU5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13536 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.404e-119 Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSH+R PRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQT APPPS P +KNKIITRQEDNETSSAIT+DVCSSYVATTVSP+SQFL DMPLFTPSSTDFFCS RPPAQKFAD+GTLNSP+LLEFMKGLPDY
Sbjct: 1 MSSLNSHDRVPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTAAPPPSRPSHKNKIITRQEDNETSSAITDDVCSSYVATTVSPISQFLVDMPLFTPSSTDFFCSTRPPAQKFADVGTLNSPNLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A1U8I1V1_GOSHI (VQ motif-containing protein 8, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107890207 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.404e-119 Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSH+R PRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQT APPPS P +KNKIITRQEDNETSSAIT+DVCSSYVATTVSP+SQFL DMPLFTPSSTDFFCS RPPAQKFAD+GTLNSP+LLEFMKGLPDY
Sbjct: 1 MSSLNSHDRVPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTAAPPPSRPSHKNKIITRQEDNETSSAITDDVCSSYVATTVSPISQFLVDMPLFTPSSTDFFCSTRPPAQKFADVGTLNSPNLLEFMKGLPDY 187
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A2P5RPS2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD14272 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.732e-93 Identity = 151/187 (80.75%), Postives = 153/187 (81.82%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 187
MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQ P +GEVVKQT APPPS PPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMS+FLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY
Sbjct: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQDP-------------------------------NGEVVKQTAAPPPSRPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSRFLADMPLFTPSSTDFFCSPRPPAQKFADMGTLNSPSLLEFMKGLPDY 156
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A1R3KJ30_9ROSI (VQ motif-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_07638 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 7.762e-63 Identity = 117/210 (55.71%), Postives = 132/210 (62.86%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATT----------------VSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS N HER + +M+NG+RPSPLKINK SH+IQKP + PKQQQ QRQGP+IIYTHSPKIIHTQARDFMALVQKLTGLSRSD EV + P EDN++SSA+T D SS +P F AD+PLFTP+S DFFCSPR P KFAD +G LNSPSLLEFMKGLPDY
Sbjct: 1 MSPANPHERGLKPGMMINGLRPSPLKINKDSHLIQKPVPA-----PKQQQHQRQGPVIIYTHSPKIIHTQARDFMALVQKLTGLSRSDNEVNDSAPSKP-------------TEDNDSSSALTEDNGSSGGVDVNNKPQTRTQTQTTNIMSTPPVPFFADVPLFTPNSADFFCSPR-PVYKFADNSIMSPGLGNLNSPSLLEFMKGLPDY 191
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A1R3J4I7_COCAP (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07667 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.938e-58 Identity = 120/208 (57.69%), Postives = 135/208 (64.90%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQ-RQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSS-------YVATT------VSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS N HERA + +M+NG+RPSPLKINK SH+IQKP + PKQQQQQ R GP+IIYTHSPKIIHTQARDFMALVQKLTGLSRSD EV + P EDN++SSA+T D SS VA T +P F D+PLFTP+S DFFCSPR P KFAD +G LNSPSLLEFMKGLPDY
Sbjct: 1 MSPTNPHERALKPGMMINGLRPSPLKINKDSHLIQKPVPA-----PKQQQQQQRHGPVIIYTHSPKIIHTQARDFMALVQKLTGLSRSDNEVNDSAPSKP-------------TEDNDSSSALTEDNGSSGGVDVNNKVAQTQSTNIITTPPVPFFGDVPLFTPNSADFFCSPR-PVYKFADNSIMSPGLGNLNSPSLLEFMKGLPDY 189
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A0A061E710_THECC (VQ motif-containing protein, putative (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_009707 PE=4 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.640e-55 Identity = 121/225 (53.78%), Postives = 141/225 (62.67%), Query Frame = 0
Query: 1 MSSLNSHERAPRKELMMNGIRPSPLKINKGSHVIQKPSS---SSALHHPKQQQQQRQ---GPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIIT------------RQEDNETSSAIT-------------NDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSPRPPAQKFAD-------MGTLNSPSLLEFMKGLPDY 187
MS +NSHER PR++LM+NG+RPSPLKINK SH IQK S S A P + Q Q+Q GP+IIYTHSPKIIHTQARDFMALVQKLTG SRSD EV K + N I + RQEDN++SSA+T N+V S + SP + F AD+ LFTP+S DFFCSPR P KFAD +G L+SPSLLEFMKGLPDY
Sbjct: 52 MSPVNSHERPPRRDLMINGLRPSPLKINKDSHFIQKSSGLVLSQAAAAPLKNQYQQQQRQGPIIIYTHSPKIIHTQARDFMALVQKLTGFSRSD-EVTKTAPSKLRKHKAKDNSISSLEGNISMELARNRQEDNDSSSALTDENGGFGVGGGDVNNVSLSSAPSITSPPNPFFADIALFTPNSVDFFCSPR-PVYKFADNEIVSPTLG-LSSPSLLEFMKGLPDY 273
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: F6HEW2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03650 PE=4 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.172e-50 Identity = 102/195 (52.31%), Postives = 129/195 (66.15%), Query Frame = 0
Query: 8 ERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVC-----SSYVATTVSPM----SQFLADMPLFTPSSTDFFCSPRP------PAQKFADMGTLNSPSLLEFMKGLPDY 187
E+ PRKE+ NG RPSPLKINK SH I KPSS+ + P + Q++ P+IIYTHSPKIIHTQARDFMALVQKLTGLS S V Q AP P + + ++DNE+SS +T+D C + +++VSP+ + +LAD+PLFTP+STDFFCSP P PA +M SPS+ EFMKGLP+Y
Sbjct: 9 EQQPRKEI--NGPRPSPLKINKDSHSINKPSSTLSFSKPPAAKHQQRHPVIIYTHSPKIIHTQARDFMALVQKLTGLSSSSDSV--QNNAP---AQPQEAVKASSRDDNESSSVLTDDHCGGAGDAQVSSSSVSPIFNASNPYLADIPLFTPNSTDFFCSPCPFYRYPDPAFSSPNMANSISPSVFEFMKGLPEY 196
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Match: A5AJM8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000273 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.207e-50 Identity = 102/195 (52.31%), Postives = 129/195 (66.15%), Query Frame = 0
Query: 8 ERAPRKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVC-----SSYVATTVSPM----SQFLADMPLFTPSSTDFFCSPRP------PAQKFADMGTLNSPSLLEFMKGLPDY 187
E+ PRKE+ NG RPSPLKINK SH I KPSS+ + P + Q++ P+IIYTHSPKIIHTQARDFMALVQKLTGLS S V Q AP P + + ++DNE+SS +T+D C + +++VSP+ + +LAD+PLFTP+STDFFCSP P PA +M SPS+ EFMKGLP+Y
Sbjct: 40 EQQPRKEI--NGPRPSPLKINKDSHSINKPSSTLSFSKPPAAKHQQRHPVIIYTHSPKIIHTQARDFMALVQKLTGLSSSSDSV--QNNAP---AQPQEAVKASSRDDNESSSVLTDDHCGGAGDAQVSSSSVSPIFNASNPYLADIPLFTPNSTDFFCSPCPFYRYPDPAFSSPNMANSISPSVFEFMKGLPEY 227
BLAST of CotAD_46445 vs. Araport11
Match: gnl|BL_ORD_ID|10366 (AT1G68450.1 | VQ motif-containing protein | Chr1:25661721-25662179 REVERSE LENGTH=152 | 201606) HSP 1 Score: 85.1149 bits (209), Expect = 4.586e-21 Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 0
Query: 17 MNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSP 159
+NG RPS LK+ SH I+K SS + K + R P+IIY HSPK+IHT+A DFMALVQ+LTGL E++++ T+ S + + D+ T++ + D Q L DMPLFTPSS F SP
Sbjct: 9 INGSRPSSLKLAGESHTIKKTSSCKS----KPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQRLTGLD----EIIRRNTSESSSSVVTEEVNVG---DDNTAAPFSQD----------RTQRQKLTDMPLFTPSSMTLFGSP 130
BLAST of CotAD_46445 vs. Araport11
Match: gnl|BL_ORD_ID|23667 (AT3G18360.1 | VQ motif-containing protein | Chr3:6300827-6301684 REVERSE LENGTH=285 | 201606) HSP 1 Score: 64.6994 bits (156), Expect = 1.721e-12 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 25 LKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITR----QEDNETSSAITNDVCSSY 130
LK+NK SHVI+KP S S+ + + P+IIYTH+P+IIHT +DFMALVQKLTG++ SD ++ P N+ ++ +++N N+ +Y
Sbjct: 46 LKVNKDSHVIKKPPSPSSFSSAAKPRH----PVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNY 151
BLAST of CotAD_46445 vs. Araport11
Match: gnl|BL_ORD_ID|4018 (AT1G21326.1 | VQ motif-containing protein | Chr1:7469002-7469721 REVERSE LENGTH=239 | 201606) HSP 1 Score: 53.5286 bits (127), Expect = 1.112e-8 Identity = 35/86 (40.70%), Postives = 44/86 (51.16%), Query Frame = 0
Query: 8 ERAPRKELMMNGIRPSPLKINKGSHVIQK----------PSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
R+PR ++ G RP PLK+ SH I K P Q + GP+IIYT SP+IIHT +FM LVQ+LTG
Sbjct: 3 NRSPRSRGIL-GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIHTHPNNFMTLVQRLTG 87
BLAST of CotAD_46445 vs. Araport11
Match: gnl|BL_ORD_ID|23729 (AT3G18690.1 | MAP kinase substrate 1 | Chr3:6429755-6430423 REVERSE LENGTH=222 | 201606) HSP 1 Score: 51.6026 bits (122), Expect = 5.064e-8 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 12 RKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQR--QGPLIIYTHSPKIIHTQARDFMALVQKLTGLS 85
+++L + G RPSPL ++K SH I+KP A + Q + P++IY SPK++H A +FM +VQ+LTG+S
Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGIS 94
BLAST of CotAD_46445 vs. Araport11
Match: gnl|BL_ORD_ID|4015 (AT1G21320.4 | nucleic acid/nucleotide binding protein | Chr1:7463411-7465200 REVERSE LENGTH=358 | 201606) HSP 1 Score: 48.521 bits (114), Expect = 7.610e-7 Identity = 33/85 (38.82%), Postives = 43/85 (50.59%), Query Frame = 0
Query: 9 RAPRKELMMNGIRPSPLKINKGSHVIQK----------PSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTG 83
R+PR M G +P+PLK+ SH I K P Q + GP+ IYT +P+IIHT +FM LVQ+LTG
Sbjct: 4 RSPRSRGNM-GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIHTHPNNFMTLVQRLTG 87
BLAST of CotAD_46445 vs. ExPASy Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.414e-20 Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 0
Query: 17 MNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITRQEDNETSSAITNDVCSSYVATTVSPMSQFLADMPLFTPSSTDFFCSP 159
+NG RPS LK+ SH I+K SS + K + R P+IIY HSPK+IHT+A DFMALVQ+LTGL E++++ T+ S + + D+ T++ + D Q L DMPLFTPSS F SP
Sbjct: 9 INGSRPSSLKLAGESHTIKKTSSCKS----KPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQRLTGLD----EIIRRNTSESSSSVVTEEVNVG---DDNTAAPFSQD----------RTQRQKLTDMPLFTPSSMTLFGSP 130
BLAST of CotAD_46445 vs. ExPASy Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.657e-11 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 25 LKINKGSHVIQKPSSSSALHHPKQQQQQRQGPLIIYTHSPKIIHTQARDFMALVQKLTGLSRSDGEVVKQTTAPPPSPPPYKNKIITR----QEDNETSSAITNDVCSSY 130
LK+NK SHVI+KP S S+ + + P+IIYTH+P+IIHT +DFMALVQKLTG++ SD ++ P N+ ++ +++N N+ +Y
Sbjct: 46 LKVNKDSHVIKKPPSPSSFSSAAKPRH----PVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNY 151
BLAST of CotAD_46445 vs. ExPASy Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2) HSP 1 Score: 51.6026 bits (122), Expect = 4.874e-7 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 12 RKELMMNGIRPSPLKINKGSHVIQKPSSSSALHHPKQQQQQR--QGPLIIYTHSPKIIHTQARDFMALVQKLTGLS 85
+++L + G RPSPL ++K SH I+KP A + Q + P++IY SPK++H A +FM +VQ+LTG+S
Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGIS 94 The following BLAST results are available for this feature:
BLAST of CotAD_46445 vs. NCBI nr
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs NCBI nr) Total hits: 10
BLAST of CotAD_46445 vs. Soybase Glyma v1.0
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Soybase Glyma) Total hits: 13
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BLAST of CotAD_46445 vs. Vitis vinifera
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Vitis vinifera Genome) Total hits: 1
BLAST of CotAD_46445 vs. Cacao Genome Database
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Cacao) Total hits: 4
BLAST of CotAD_46445 vs. Rice Genome Annotation Project
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Oryza sativa) Total hits: 3
BLAST of CotAD_46445 vs. Populus trichicarpa v2.0
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Populus Genome) Total hits: 7
BLAST of CotAD_46445 vs. ExPASy TrEMBL
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot TrEMBL) Total hits: 10
BLAST of CotAD_46445 vs. Araport11
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Araport11) Total hits: 5
BLAST of CotAD_46445 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot Swiss-Prot) Total hits: 3
InterPro
Analysis Name: InterProScan analysis of Gossypium hirsutum AD1 genome protein v1.0 (BGI-CGP)
Date Performed: 2015-11-23
Sequences
The
following sequences are available for this feature:
mRNA sequence >CotAD_46445_BGI-AD1_v1.0 ID=CotAD_46445_BGI-AD1_v1.0; Name=CotAD_46445; organism=Gossypium hirsutum; type=mRNA; length=564bpback to top protein sequence of CotAD_46445_BGI-AD1_v1.0 >CotAD_46445_BGI-AD1_v1.0 ID=CotAD_46445_BGI-AD1_v1.0; Name=CotAD_46445_BGI-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=187bpback to top mRNA from alignment at Dt_chr9:21775976..21776539+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>CotAD_46445_BGI-AD1_v1.0 ID=CotAD_46445_BGI-AD1_v1.0; Name=CotAD_46445; organism=Gossypium hirsutum; type=mRNA; length=564bp; location=Sequence derived from: Dt_chr9:21775976..21776539+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at Dt_chr9:21775976..21776539+ >CotAD_46445_BGI-AD1_v1.0 ID=CotAD_46445_BGI-AD1_v1.0; Name=CotAD_46445; organism=Gossypium hirsutum; type=CDS; length=564bp; location=Sequence derived from: Dt_chr9:21775976..21776539+ (Gossypium hirsutumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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