GhUA48.D13G004800.1

Transcript Overview
NameGhUA48.D13G004800.1
Unique NameGhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length270
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D13chromosomeD13:423693..431589 +Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
adghaL0613Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghaL0617Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghaL1025Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghaL2320Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghaL2323Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghaL2658Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
gecghaL0177Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gdghaL0612Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghaL0617Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gecghaL0608Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gecghaL0616Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gdghaL1051Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gecghaL1024Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gdghaL2332Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghaL2334Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gecghaL2253Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gecghaL2257Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
gdghaL2670Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gecghaL2581Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
ghaghuR2190Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghaghuR2197Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghaghuR2220Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghaghuR2249Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghaghuR2250Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghaghuR2267Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
ghatoR2230Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghatoR2259Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghatoR2291Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghauhR2209Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghauhR2214Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghauhR2240Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghatoR2294Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghauhR2268Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghatoR2315Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghauhR2269Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghauhR2289Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghahnR3003Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3020Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3029Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3055Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3064Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3110Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3113Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghahnR3143Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghaghaL0681Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghaghaL0688Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
ghaghaL1039Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
adsghaL0581Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
ghaghaR1820Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
adsghaL0984Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adsghaL2158Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adsghaL2161Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
adsghaL2468Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
ghahwR2227Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghahwR2248Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghahwR2255Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghahwR2285Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
d3dghaL0314Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
d3dghaL0523Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
awghaL0628Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
b1jghaL0659Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
awghaL0633Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
b1jghaL0992Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
fnghaL0625Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
fnghaL0632Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
fnghaL0939Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
ghagosR2173Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
ghagosR2180Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
ghagosR2203Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
ghagrbR2023Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghagrbR2040Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghagrbR2046Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghagrbR2073Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghagroR2358Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
ghagroR2424Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
ghagroR2437Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
ghagrhR2149Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
ghagrhR2169Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
ghagrhR2175Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
ghagrhR2198Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
dtcghaL0903Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
dtcghaL0906Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
dtcghaL1298Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
ghagtiR2160Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghagtiR2169Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghagtiR2175Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghagtiR2180Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghagtbR2075Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghagtbR2098Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghagtbR2102Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghagtbR2123Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri

Orthologs
Gene/TranscriptAssemblySpecies
Grot_10G005900.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
Ghe13G00510Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Grot_05G024020.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
Ghe10G24080Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Grai_10G023930.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
rna-gnl|WGS_VKGI|Godar.A13G002800.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
GekA1301T004800.1Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
EVM0010745.1Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
EVM0032903.1Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
rna-gnl|WGS_VKGE|Gotom.A13G005400.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gar13G00510Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
rna-gnl|WGS_VKGE|Gotom.D13G005200.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
TURN.03g366390.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
EVM0028077.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
EVM0012267.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
Ghar_13G000048.mRNA1Gossypium harknessii (D2-2) genome CRI_v1Gossypium harknessii
gene-E1A91_A13G004900v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS_VKGI|Godar.D13G005300.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Grai_13G000510.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
D5.v1.pred_00018660-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
GstA1301T248900.1Gossypium stephensii (AD7) 'AD701' genome CRI_v1Gossypium stephensii
GekA1001T205000.1Gossypium ekmanianum (AD6) 'AD602' genome CRI_v1Gossypium ekmanianum
Golon.013G004100-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
evm.model.Goano13G3144Gossypium anomalum (B1) genome JAAS_v1.2_a1.1Gossypium anomalum
gene-E1A91_D13G005300v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
D5.v1.pred_00013033-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
GhUA48.A13G003900.1Gossypium hirsutum (AD1) 'UA48' genome HGS_v1.1Gossypium hirsutum
Gh_A10G1651Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GhUGA230.A13G005500.1Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
Gh_A13G0031Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gohir.D13G004600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gohir.A13G004900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gh_D13G0047Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GhUGA230.D13G005200.1Gossypium hirsutum (AD1) 'UGA230' genome HGS_v1.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GhUA48.D13G004800GhUA48.D13G004800.v1.1_HGS-UA48_v1.1Gossypium hirsutumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GhUA48.D13G004800.1.v1.1.exon.1_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.exon.1_HGS-UA48_v1.1Gossypium hirsutumexon
GhUA48.D13G004800.1.v1.1.exon.2_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.exon.2_HGS-UA48_v1.1Gossypium hirsutumexon
GhUA48.D13G004800.1.v1.1.exon.3_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.exon.3_HGS-UA48_v1.1Gossypium hirsutumexon
GhUA48.D13G004800.1.v1.1.exon.4_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.exon.4_HGS-UA48_v1.1Gossypium hirsutumexon
GhUA48.D13G004800.1.v1.1.exon.5_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.exon.5_HGS-UA48_v1.1Gossypium hirsutumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GhUA48.D13G004800.1.v1.1.CDS.1_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.CDS.1_HGS-UA48_v1.1Gossypium hirsutumCDS
GhUA48.D13G004800.1.v1.1.CDS.2_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.CDS.2_HGS-UA48_v1.1Gossypium hirsutumCDS
GhUA48.D13G004800.1.v1.1.CDS.3_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.CDS.3_HGS-UA48_v1.1Gossypium hirsutumCDS
GhUA48.D13G004800.1.v1.1.CDS.4_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.CDS.4_HGS-UA48_v1.1Gossypium hirsutumCDS
GhUA48.D13G004800.1.v1.1.CDS.5_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1.CDS.5_HGS-UA48_v1.1Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1Gossypium hirsutumpolypeptide
GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1-proteinGossypium hirsutumpolypeptide


Homology
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5D2HR51|A0A5D2HR51_GOSTO (Reactive oxygen species modulator 1 (Fragment) OS=Gossypium tomentosum OX=34277 GN=ES332_D13G005200v1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.513e-42
Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    8 TDIARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            TDIARDSCLARVTAGVAVGGAVGGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH
Sbjct:    1 TDIARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 76
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5D2RWD2|A0A5D2RWD2_GOSMU (Reactive oxygen species modulator 1 OS=Gossypium mustelinum OX=34275 GN=E1A91_D13G005300v1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 8.692e-40
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            +ARDSCLARVTAGVAVGGAVGGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH
Sbjct:    1 MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 74
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5D1ZT56|A0A5D1ZT56_GOSDA (Reactive oxygen species modulator 1 OS=Gossypium darwinii OX=34276 GN=ES288_D13G005300v1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 8.692e-40
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            +ARDSCLARVTAGVAVGGAVGGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH
Sbjct:    1 MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 74
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5J5NFN4|A0A5J5NFN4_GOSBA (Reactive oxygen species modulator 1 OS=Gossypium barbadense OX=3634 GN=ES319_D13G005100v1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 8.692e-40
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            +ARDSCLARVTAGVAVGGAVGGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH
Sbjct:    1 MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 74
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1U8MDF3|A0A1U8MDF3_GOSHI (Reactive oxygen species modulator 1-like OS=Gossypium hirsutum OX=3635 GN=LOC107935493 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 8.692e-40
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            +ARDSCLARVTAGVAVGGAVGGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH
Sbjct:    1 MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 74
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8J5HF58|A0A8J5HF58_ZINOF (Reactive oxygen species modulator 1 OS=Zingiber officinale OX=94328 GN=ZIOFF_009121 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 8.107e-37
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            + RDSCLARVTAGVA+GG++GGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAA+FGLF+GAGSLIHCGKS+
Sbjct:    1 MGRDSCLARVTAGVAIGGSIGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAVFGLFMGAGSLIHCGKSY 74
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T2Y117|A0A8T2Y117_POPDE (Reactive oxygen species modulator 1 OS=Populus deltoides OX=3696 GN=H0E87_017616 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.393e-28
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    7 NTDIARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            N ++ARDSCLARVTAGVAVGGA+GGAVGA+YGTYEA+RYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKS+
Sbjct:   37 NPEMARDSCLARVTAGVAVGGAIGGAVGAVYGTYEAVRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSY 113
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BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8X8CH73|A0A8X8CH73_POPTO (Reactive oxygen species modulator 1 OS=Populus tomentosa OX=118781 GN=POTOM_032972 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.996e-28
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    7 NTDIARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            N ++ARDSCLARVTAGVAVGGA+GGAVGA+YGTYEA+RYKVPGLLKI      RYIGQTTLGSAAIFGLFLGAGSLIHCGKS+
Sbjct:   39 NPEMARDSCLARVTAGVAVGGAIGGAVGAVYGTYEAVRYKVPGLLKI------RYIGQTTLGSAAIFGLFLGAGSLIHCGKSY 115
[Close]
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7N1A8B9|A0A7N1A8B9_KALFE (Reactive oxygen species modulator 1 OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.074e-28
Identity = 53/77 (68.83%), Postives = 64/77 (83.12%), Query Frame = 0 
Query:   13 DSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            + CL RV +GVA+G A+GG+VGAI+GTYEAIRY+VPGLLKI      RY+GQTT+   A+FGLFLGAGSLIHCGKS+
Sbjct:    3 NECLVRVASGVALGAALGGSVGAIFGTYEAIRYRVPGLLKI------RYVGQTTVKCGAMFGLFLGAGSLIHCGKSY 73
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BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6I9S7U2|A0A6I9S7U2_ELAGV (Reactive oxygen species modulator 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105057620 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.068e-27
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH 89
            +ARDSCLARVT G A+GGA+GGAVGA+YGTYEAIRYKVPGLLKI      RYIGQTTLGSAA+FGLFLGAGSLIHCGKS+
Sbjct:    1 MARDSCLARVTTGAALGGAIGGAVGAVYGTYEAIRYKVPGLLKI------RYIGQTTLGSAAVFGLFLGAGSLIHCGKSY 74
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BLAST of GhUA48.D13G004800.1 vs. Araport11
Match: AT3G07910.1 (| Symbols: no symbol available | no full name available | chr3:2523367-2524048 REVERSE LENGTH=74)

HSP 1 Score: 86.6557 bits (213), Expect = 5.432e-24
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 0 
Query:   10 IARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGLLKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH* 90
            +A++SCLA++TAGVAVGGA+GGAVGA+YGTYEAIR KVPGL K+      R+IGQTTL SAAIFGLFLGAGSLIHCGK +*
Sbjct:    1 MAKNSCLAKITAGVAVGGALGGAVGAVYGTYEAIRVKVPGLHKV------RFIGQTTLSSAAIFGLFLGAGSLIHCGKGY* 75
The following BLAST results are available for this feature:
BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-11 (BLASTP of HGS v1.1 Gossypium hirsutum 'UA48' proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A5D2HR51|A0A5D2HR51_GOSTO6.513e-4291.46Reactive oxygen species modulator 1 (Fragment) OS=... [more]
tr|A0A5D2RWD2|A0A5D2RWD2_GOSMU8.692e-4090.00Reactive oxygen species modulator 1 OS=Gossypium m... [more]
tr|A0A5D1ZT56|A0A5D1ZT56_GOSDA8.692e-4090.00Reactive oxygen species modulator 1 OS=Gossypium d... [more]
tr|A0A5J5NFN4|A0A5J5NFN4_GOSBA8.692e-4090.00Reactive oxygen species modulator 1 OS=Gossypium b... [more]
tr|A0A1U8MDF3|A0A1U8MDF3_GOSHI8.692e-4090.00Reactive oxygen species modulator 1-like OS=Gossyp... [more]
tr|A0A8J5HF58|A0A8J5HF58_ZINOF8.107e-3781.25Reactive oxygen species modulator 1 OS=Zingiber of... [more]
tr|A0A8T2Y117|A0A8T2Y117_POPDE2.393e-2884.34Reactive oxygen species modulator 1 OS=Populus del... [more]
tr|A0A8X8CH73|A0A8X8CH73_POPTO4.996e-2884.34Reactive oxygen species modulator 1 OS=Populus tom... [more]
tr|A0A7N1A8B9|A0A7N1A8B9_KALFE8.074e-2868.83Reactive oxygen species modulator 1 OS=Kalanchoe f... [more]
tr|A0A6I9S7U2|A0A6I9S7U2_ELAGV5.068e-2782.50Reactive oxygen species modulator 1 OS=Elaeis guin... [more]
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BLAST of GhUA48.D13G004800.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-11 (BLASTP of HGS v1.1 Gossypium hirsutum 'UA48' proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GhUA48.D13G004800.1 vs. Araport11
Analysis Date: 2024-07-11 (BLASTP of HGS v1.1 Gossypium hirsutum 'UA48' proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G07910.15.432e-2475.31| Symbols: no symbol available | no full name avai... [more]
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InterPro
Analysis Name: InterProScan Analysis for HGS v1.1 Gossypium hirsutum 'UA48' proteins
Date Performed: 2024-07-11
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018450Romo1/Mgr2PFAMPF10247Romo1coord: 14..85
e-value: 2.7E-16
score: 71.0
IPR018450Romo1/Mgr2PANTHERPTHR28525REACTIVE OXYGEN SPECIES MODULATOR 1coord: 1..85

Sequences
The following sequences are available for this feature:

mRNA sequence

>GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1 ID=GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1; Name=GhUA48.D13G004800.1; organism=Gossypium hirsutum; type=mRNA; length=270bp
ATGGTATATTTTTACGATAATACTGACATTGCAAGAGACAGCTGTTTGGC
TCGCGTCACTGCCGGCGTTGCCGTCGGAGGAGCTGTTGGCGGCGCCGTTG
GTGCTATTTACGGTACTTATGAGGCTATTAGATACAAGGTCCCGGGACTT
CTCAAGATTAGATATTCTGACTTCAACAGATATATTGGGCAAACAACTCT
CGGTAGTGCTGCGATTTTCGGTCTTTTTTTGGGTGCTGGAAGCTTGATAC
ATTGTGGGAAATCACACTGA
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protein sequence of GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1

>GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1 ID=GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1; Name=GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1; organism=Gossypium hirsutum; type=polypeptide; length=90bp
MVYFYDNTDIARDSCLARVTAGVAVGGAVGGAVGAIYGTYEAIRYKVPGL
LKIRYSDFNRYIGQTTLGSAAIFGLFLGAGSLIHCGKSH*
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mRNA from alignment at D13:423693..431589+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1 ID=GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1; Name=GhUA48.D13G004800.1; organism=Gossypium hirsutum; type=mRNA; length=7897bp; location=Sequence derived from: D13:423693..431589+ (Gossypium hirsutum
ATGGTATATTTTTACGATAGTAAAAATGTGATTTTATCATTTTAATAGTC
TATATTTTTATAATTTTTAAAATATTAAATTAAATTTTTATTATTTAGGG
GCACAATATAATTTTACTATTACTAATTTAAAATTTTCTATTTTAGGGGG
ATTTAAACCCTGCCAGCCCCTCTGATTTTGAGACTCAACTATTACAATGT
AGTGTCTATAAAAAGGAATATTTGGATATAGAAAATAATAGATGAAATTT
ATAAGATTAAAATCATAATAAACAATAGACGAAATGCTTAATCAATGCCA
ACTTTGTTAACAAAACATTGGTTATCAGAACCCTGGGATGATGTGCCACC
TTATGCCTCCGCATCCGAATGCAGATGAGACTCTACTATAGCACGTAAAT
ATACACACACCACTTTACATGTCATAAATACTCTTCATTTTTTTCTTTAT
CATTGTCACCTCAAATTAGATTCCATTAGGTCAATCCGACCGGAAGCAAA
TAATACGTGGTAGATACTGACATTGCAAGAGACAGCTGTTTGGCTCGCGT
CACTGCCGGCGTTGCCGTCGGAGGAGCTGTTGGCGGCGCCGTTGGTAAGT
CTCCGACTTTTTTCCACTACTCACTAAAACCCTAAACCTCATTGTTCTGC
TTCTGGTTATCATAAAAATAATAATAATAAACAGCCACAAATCAATTGCA
AATTTCAATTACAATAAAGTTTAATTATTTGCAAAAGCATGAAATTATCT
ATTTTCTGTTTTGAATAGTGACTCTGAAACTTATTTCTAAATTACTGTCA
ATTGCAATTACAATAATAATTATTATTGTCAAATTTTAAGTATTTTCAAA
AGCTTGAAATTATCCGATTTTTAGTATAGTGACTCTAGAACAAATAATAA
GTATCTTCATAGTATTTTCTTTTTCCTTTAGATTATGGATTTTTCGGATT
TTAATTTTCAGTGTTGATAGTTTGCAGAGAAAGTTATCGGTGAATGCACT
TGAGAGGTCCCTCTATTAAACAGACCTGATCAAATTAGTCCCTTTAGTCC
CTGTACTATTGAAAAAATCAAATAAGTTCAAATTGTAACAAGGTAACATT
TAATGCATAAAAGTTGTTGTTTACTGTTTCACAAAGTTAATATTTTTAAA
GATTTTATGGTTCTGTAAATGAAATCTTTTGTTTGGAATTGAACTCCAAT
TGAAAAAATAATTTTCAAGACATTTTTTATATGGTAAATGTTAACTATGT
TACAATTTGGACTTATTTGATTCTTTTTAATATAGGGACTAAATTGATCC
ATTTAATAATAGAGGTACTAACATGATCCTGCCCCTATAATACAAGGATC
TTCGAGGTATTTTAACTGAAAGTTATTAGTAAAAGAAAGCGCCAGATAAT
CAAAGAAAACATTGTTTATTTTTCAATTCATAAATTGATTAAGGAAAAAC
TTGCTTCTGTGATTTTCTTAATATGGTCTTATTATGGGTTCTAGCTAGCT
AATTACATGTTTTGAGCTTGTTGCCTTCATCATTGAAAAGCTGTTTTCTT
GTTTAATATTTGCTGTTAGATGGATGTGATTAAGTGGGGATAAATTTAGC
TAATTACATGTTTCAATTGGCAAGTTAAATTCCCTGGTATATTTATAGTG
ATGATATGTAGAAACTATAGACTAGGAGACAATGTAATTGTGAACTTTTA
GTTTTGCTCATAGAACTGAATATTGTTATTTGTCTTTTGGCACATAATAA
AGCACATTGGTCTCCGCTCCTTGGGTTACAGCTATAATAGGGCTACCCTT
CTCCATTCCATTAAGCTGTCCTTCCTAAGATTCGACATTGAGACCTCTAA
GCTGGAAGTTTAAGCTTTAACTATTGGGGACGTAGTGCTGGAGTTTAGTG
CATATGCAGATAATGGACAACCATCAAGAAACATGCATTGCTATTACTTT
GTAGTATATTTGAATTTTTACGGACAGTTGCACCATTCAAGAATAATGTT
CTCTGGGTGTCAAGAGAGGTTAGAAGGATGAAGATGGATTATTAGGAGAG
GAATTAGATTACTGTAGAGAGGTGGATTGCGAAAGGGGATCAGGGGCAGG
GGTGGGGGTGGGGAGGTCTTCTGTTAGAATCTTTTAAATGTAGCTGCTCT
CTTTCTTTGTTGCTTTGAAGCAGTCCTTTCCTGGATCATATATTGTCCGT
GCTTTGATTTTAATCTTTTATTTTTGAACGGTAAATAAGTTTCTTTTATG
TGATTGCGCTTGTGCAGGTGCTATTTACGGTACTTATGAGGCTATTAGAT
ACAAGGTAATGTCCAACATTTTACTTTTCTTTCATGAAATTAAACCATGT
TGATTCTATGTTTGCGTTTCTGCATTTGCCACCCCAGTCATAAATAGTGA
TAAAACTTACATGGATCATGATCCGTATTTTTATAAACCTTGCAAAGAGG
TCTTCCTGTGTCATTTTGGTATCTGGCCATGTGATGACTTGCCTGTGTCA
TGGATGAAACTTTTAACAAAAATGACCAATTTGCTCTTTGATCTAATTTA
TAGAGACTAGTTTGTCCATTTTTTGAGTAGAAGGGACAAAATGCAATCCA
ACTCTTAGTACAGAAGCCTTCATAGTGCTTTTACAGATAAAATCATGATT
CCGTTGCTGGAGATGACATTGGCATGTTTAATGAGTACCTTAACATTAAT
GTTAAATGCTAAAAGAAAGGTTTTGCGTGTATTAATAATCTCATTCATTT
GGAATTGATTCATATTGTGGCGATATGCAGGTCCCGGGACTTCTCAAGAT
TAGATATTGTTGGTGCAAGAGGCAGCAACAAGCTGTTTTCTGTCTTGCTT
GAGTAGTAAGCCTCGAGCCTTGGTGAAGAAGCAAACTCGGAAGCAGAAAA
CAGAAAGATGAAACTAGCAAGTGAAAAACAGAAAAGAGAGAAGAAGATTG
AATGAAAAGGAGCTGATTTCTTTCATTAACTAAACCAACAAGGCATTAAG
CCATTACATATATCAGTCAACAAGTAAAACAAACAAGTAATCACCTAATA
ACATACCTAACACCACTAAGTTGCCTAGTAACTTGGTAAACTTGATTGAA
AAGCAAAAAAACTTCTACCTAAACTTGTCATTCAGCACCTAATTACATCA
AAATGCAGCTACCAACTGAGTTTGATCCTAACTAAATACAAAACATTCAA
TTAAGGAAACTAAATGGATAGCTTCAGCTTGCTGCACCAATTTTGCTGTT
GAAGCACGTTCCTTGCATGGCCACCTTTGCTGCTACGTGGGAGCTGACTT
CAACACTCCTCCTCAGCTTCTATGCAGCAGACTCCTAGCTCCCTCTTCAG
GCTTAGAAATCTTGATACACCAAGAGGCTTTGTGAAGATATCAGCAATCT
GATTTTCAGAACTGCAATGGATTAGCTCGATCTCTTGAGCTTGTTCCATT
TCTCTTATCACATGGAGTTTGATGTTGAAATGTTTTGTCCTGCCATGGAA
GACAGGATTTTTAGCAATAGCAACTGCTGACTTGTTGTCACAATGTATCA
CAGTTGCTTCATTCTGCTGTAGATTCAAGTCGCTCAAAATTTTTCTCAGC
CACATAGCTTGATTAACAGCGTTGGCAGCTGCTACATACTCTGCTTCTGC
TGTCGATTGAGCCACCATTGTTTGTTTTCTTGAGCTCCAACAAATCATAG
CTTAGCCAAGTGTAAAAGCATAGCCAGAAGTGCTCTTCATGTCATCCTTT
GAACCAGCCCAATCGCTATCAGTGTAGCCAATTAGTTTCAACTCTTCAGC
CTTTCTAAACTGTATTCCATGGTTTAAGGTACCTTTGATGTATCTTAGCA
CCCTTTTCCCAGCCTTGTAATGTTGCTGGTTACAGCAGTGCATGAACCTT
GATAGCATGCTCACAGCAAACAGAATGTCAGGTCTTGTTGCTGTCAAATA
CAATAAACACCCAACAAGGCTTCTGTAATCTGTTTCACAGACAGATTCAT
GTTCCTCCTGGCTCGATAGCTTTATGCCAATAGCCATTGGTGTGCTCACT
GGTTTACAATTCTCCATTGAGAATTTAACCAGCACTTTCAAGGCAAATGT
CTTTTGTTTCAAGAAGATTCCTCCTTCTACTTGATTGACTTCCATTCCTA
GGAAATATGTCATCAATCCCAGGTCTGACATCTCAAACATTTCCTTCATT
CTTGCTTTGAAATCAGCCATCATAAACTTGTCTCCTCCAGTCACTAGAAG
ATCATCAACATATAGTGACACAATAAGCTGTGTTTCAGCTCCATTCCTCT
TAACATAGAGTGTTGGCTCACTAGCACTCCTTTCAAATCCCAAACTGACC
AAGTATGAGTCAATTCGAGCATACCAGGCTCGAGGAGCCTGTTTTAGGCC
ATACAAGGCCTTTCTTAGCCTATACACCAAATGTTCCTTACCATGCACTA
TAAAACCTGGGGGTTGCTCGATGTATATCTCCTCTTCTAGGAATCCATTG
AAGAATGCAGACTTGACATCCATTTGGTGGATTGTCCACTGGTTCTGAGC
AGCAACTGCAATCAGCAATCTGATTGTATCGAGTCTGGCTACTGGAGCAA
ATGTTTCCATGTAGTCCAGACCATACCTTTGACTGAAGCCCTTTATAACT
AGCCTGGCCTTTAACTTGTTTAAACTTCCATCCGCATTGTGCTTCACTCG
ATAGACCCATTTTACACCGATAGTCTTTCTGTTGGCAGGCTTTTCAACCA
GCTCCCATGTCTGATTCTTTACAATCATGTTGATTTCATCAACCATAGCT
TGTTTCCAACCTTCATCTGTCTCAGCCTCTTCAAAACTGCTAGGTTCTGC
TATTGCAACCTGTGCCCTTTCATAAATATCTTCTAGGGGCCTTGTGCCTC
TCACAGGCACATCATCAACATCCATTTCAGGTCCTAGCTGCTCAAGTTCA
GCTTGATTAGGCACTAGGTCTTCTGAAATTGCTTCTGGCTCATTTTTCTC
CCAATTCCAGCAGGCTTTTTCATCAAAGATGACATCTCTGCTCACCTGGA
CTTTGTTTGTCAAGGGATCTAAAATCCTGTAGCCCTTCTTGACTGAGCTG
TAGCCTACTAGAACACCTGGTTGAGCCCTTTTAGAGAGTTTGTCTCTCTT
TGCTGCTGGTATTTGTGCATAACACAGGCAACCAAACACCTTCAGATGTG
CCAAGGAAGGCTTGAAACTAAACCAAGCCTCAAAAGGTGTCTCGGATACA
AGAGCTTTGGTAGGAAGCCTGTTCTGAAGGTAAACAGCAGTGTTTACTGC
CTCAGCCCACATGGTCTTGGGCAGTTTCTTTTCAAACAGGAGACATCTGG
CCATATCCATTAGACTTCTGTTCTTTCTTTCAGCTACCCCATTCTACTGA
GGTGTGTAGACATTTGTAAGCTGATGTTTGATACCAGCATCATTGCAAAT
GGCTTAAAACTGAGCTGAAGTGTACTCAGTGCCATTGTCAGTCCTTATCG
ATTTCAGCTTGCAACCTGTTTCTGTTTCTACAGCATTTTTAAACTTCACA
AACACTTGAGCTACCTCAGACTTGTGTTTTAAAAAGAAAATCCAGCAAAA
CCTTGTAAGATCATCAATAAAGAGGATGAAATACCTGTTTTTGCTGAGTG
ATTCAGTCCTCATCGGGCCACGTACATCAGAGTGCACCAGCTGCAGTCTT
TCAGTAGCTCTCCAAGCTGAATTTGTAGGAAATGGCAGTCTTGCCTGTTT
CCCCATTTGGCAAACTTCACACACATCATCATGCTCCACTGAGCTGATGA
AGTTCTCTGCCAAGCCCTCTTTGGCCAATCGAGCCATTGATCTGAAGTTG
GCATGTCCAAGCCTTTGATGCCAAAGCTTGGAGTCTTCAACAGAAGCTGT
GTATGCTGAGTTTGAGTCATTTGCCCAGTGAACCTCAAAGCATTTATCAG
TCATTGTGACTGTCATAAGGCTTGATCCACTTGGATCAGTAATGTGGCAT
TGTTTATCCTTGAACACAACAGAATAACCTTTCTCGAGCAGTTGAGCTAT
GCTGAGAAGGTTTCTGTCAATCTCTGGCACTAACAGCACATTTGGAATGA
TCTTGTTGCCTGTGGGAGTACATATCAGCACTTCTCCTCTTCCTTCAGCC
CTTATAAACTGACCATTTCCAACCTTGACCTTGGTTTTATAACTTCTGTC
CAAGGTTTTAAACAAGGAGGCATCTGGTGACATGTGGTTAGTGCAACCAC
TGTCCAGCAACCAGCCTTTTGAGCATTTCTTCTCAGCAGCTAAACAGGAA
ACAGCAAAGACCTGTTCTTCTTGGTCACTACTGTCCTCAGCCACTCGAGC
TTCAACCTTTGACTGCTGAAATTGATTCTGCCTTGGCTTACTTCTGTTTT
TACAGACCCTTTCAACATGGCCCTTCTTCTTACAGTGTTGGCATACTGCA
TCTGGCCTAAACCAGCATCTGTCTTCTGGATGGCCAGGCTTCTTGCAATA
TCTGCAGGGCTGGTCATTGCTCCTTGCAGCATCAGGCTTAGGCCTGTTTT
TTCAAGGCTTTTTGCCTTTTTGAGCATTGGTGCTCGAGGCTTCTCTGGCC
TTGGCTTGAAATGCACCTTCTTGGTGATCTTCAGCTCTGCTAGCTCTCCT
TTGTTCCTGAGCATAGAAGGTGTTGATTAACTCAGTCAAAGAGATGCTAG
CAAGGTCTCTTGAGTCCTCTAGGGAGGATATCTTGGCCTCATATCTCTCA
GGCAAAGTGGAGAGGACTTTCTCCACAATTCTTGCCTCATCAAAGTGCTC
ACCTAGGAGCCTTATGCTGTTAACCACTGCCATAATTCTATCTGAATACT
GCTTCACTGTTTCTTCTTCCTTCATTTTCAAATTCTCGAAATCCCTTCTC
AAGTTTAACAGCTGCTGTTGCCTTGTTCTCTCAGTGCCTTGAAACTCCTC
CTTAAGCTTATCCCAGGCCTGTTTTGGAGTCTCACAGGCCATGATTCTGG
TGAAGATGACATCTGACACACAGTTCTGGATGCAGGACATGGCTTTGTGC
CTTTTGGTCCTCTCATCAGCATGTTGCCTAATCTGAGCTACTGTGGGATT
AGCCCTCAGTGGTGCTGGCTCAGTATCTGTGTTGACAACTTCCCACAGAT
CGAAGGCCTGTAGGTAAGTCTTCATCTTGACCAGCCATATGTGAAAGCCT
TCTCCATTGAAGACTGGTGGGGCTGCTGGTGAAAATCCTGAAGAAGCCAT
CAAGATCCTTGTTTTGAAGCAACAGGTCCACTAAGACAAGAGCTCTCGAT
ACCAATTGTTGGTGCAAGAGGCAGCAACAAGCTATTTTCTGTCTTGCTTG
AGTAGTAAGCCTCGAGCCTTGGTGAAGAAGCAAACTCGGAAGCAGAAAAC
AGAAAGATGAAACTAGCAAGTGAAAAACAGAAAAGAGAGAAGAAGATTGA
ATGAAAAGGAGCTGATTTCTTTCATTAACTAAACCAACAAGGCATTAAGC
CATTACATATATCAGTCAACAAGTAAAACAAACAAGTAATCACCTAATAA
CATACCTAACACCACTAAGTTGCCTAGTAACTTGGTAAACTTGATTGAAA
AGCAAAAAAAACTTCTACCTAAACTTGTCATTCAGCACCTAATTACATCA
AAATGCAGCTACCAACTGAGTTTGATCCTAACTAAATACAAAACATTCAA
TTAAGGAAACTAAATGGATAGCTTCAGCTTACTGCACCAATTTTGCTGTT
GAAGCACGTTCCTTGCATGGCCACCTTTGCTGCTACGTGGGAGCTGACTT
CAACAGATATATTGGGCAAACAACTCTCGGTAGTGCTGCGATTTTCGGTC
TTTTTTTGGGTGCTGGAAGCTTGATACATTGTGGGAAATCACACTGA
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Coding sequence (CDS) from alignment at D13:423693..431589+

>GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1 ID=GhUA48.D13G004800.1.v1.1_HGS-UA48_v1.1; Name=GhUA48.D13G004800.1; organism=Gossypium hirsutum; type=CDS; length=270bp; location=Sequence derived from: D13:423693..431589+ (Gossypium hirsutum
ATGGTATATTTTTACGATAATACTGACATTGCAAGAGACAGCTGTTTGGC
TCGCGTCACTGCCGGCGTTGCCGTCGGAGGAGCTGTTGGCGGCGCCGTTG
GTGCTATTTACGGTACTTATGAGGCTATTAGATACAAGGTCCCGGGACTT
CTCAAGATTAGATATTCTGACTTCAACAGATATATTGGGCAAACAACTCT
CGGTAGTGCTGCGATTTTCGGTCTTTTTTTGGGTGCTGGAAGCTTGATAC
ATTGTGGGAAATCACACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR018450Romo1/Mgr2