mk-At_05-snapG-11.1679-mRNA-1

Transcript Overview
Namemk-At_05-snapG-11.1679-mRNA-1
Unique Namemk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length1194
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A05chromosomeA05:10742573..10746897 -Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
barpscL0224Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
hgspscL0253Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
adbpscL0221Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
hgspscL1445Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barpscL1335Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbpscL1309Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbpscL2070Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
barpscL2111Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
hgspscL3209Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
adbpscL2894Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
barpscL2966Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adpscL0249Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
ndmpscL0258Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
awpscL0255Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
adpscL1468Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
gdpscL0238Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
ndmpscL1402Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
awpscL1317Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ndmpscL2238Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
psctoR2301Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdpscL1435Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
psctoR2379Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adpscL3213Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
ndmpscL3114Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
gdpscL2297Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdpscL3209Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
d3dpscL0381Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
d3kpscL0630Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
d3kpscL0854Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
d8ipscL1324Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
doopscL0284Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
dfipscL0490Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfipscL0696Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfipscL0805Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dtopscL0943Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dtopscL1045Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dttpscL1011Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
fnpscL0255Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dtopscL1147Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dttpscL1230Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
doopscL1426Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
fnpscL1302Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gaupscL0228Gossypium australe (G2) genome CRI_v1.1Gossypium australe
ganpscL0234Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
gaupscL0742Gossypium australe (G2) genome CRI_v1.1Gossypium australe
hzpscL0253Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ganpscL1246Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
hzpscL1361Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
pscuhR2243Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
pscuhR2312Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hzpscL2165Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
psctwR2798Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghpscL1394Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
psctwR2907Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
psctwR2926Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
psctwR2928Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hzpscL3021Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghpscL2196Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghpscL3088Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghzpscL0234Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gkpscL0795Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghzpscL1366Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gkpscL1569Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtpscL1358Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghzpscL2158Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtpscL2160Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghzpscL3048Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gospscL0246Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
ghtpscL3036Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gospscL1272Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
grbpscL0229Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
grhpscL0238Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grbpscL1233Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
grhpscL1269Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
hnpscL0221Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
jmbpscL0256Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hnpscL1384Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
jmbpscL1396Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hnpscL2214Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
jmbpscL2210Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hnpscL3322Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
jmbpscL3068Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
gtipscL0373Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gropscL0292Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
gtbpscL0233Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
hbpscL0923Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
gropscL0912Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
gtbpscL1286Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
pscpscL0265Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscL0266Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hbpscL3583Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjpscL0245Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
pscpscL1232Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hwpscL1347Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
pscpscL1719Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hjpscL1352Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjpscL2193Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjpscL3067Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
adypscL0260Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adypscL1357Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adypscL2140Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adypscL2990Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hpfpscL0251Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfpscL1390Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfpscL2175Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfpscL3054Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
rna-gnl|WGS:JABFAE|Goarm_00020578-RAGossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
gene-E1A91_A05G121100v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS:JABFAF|Goshw_00016392-RAGossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
TURN.00g295150.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
gene-EPI10_033058-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
TURN.05g137050.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
gene-EPI10_019289-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
rna-gnl|WGS:JABFAD|Gohar_00008885-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
mikado.E10G7158.1Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
rna-gnl|WGS:VKDL|Gobar.A05G119400.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
EVM0017703.1Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
Goano.005G307100-1Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
Grot_13G036280.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
Golon.005G121200-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
rna-gnl|WGS_VKGI|Godar.A05G121600.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
mikado.F10G88.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
EVM0006151.2Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
Gar05G11750Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
Gar10G00230Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
D5.v1.pred_00015288-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
Grot_10G028610.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
Grai_10G000250.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
Gosto.005G113200-1Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
Goano.010G245600-1Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
rna-gnl|WGS:JABFAA|Goari_00015184-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
GH_A10G00026_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
mk-Dt_10-snapG-5.11-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghi_A05G02246Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GhirPA1001T011100.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GH_D10G0028Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
maker-At_05-snap-gene-11.1679-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Gohir.A10G002600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Gh_D10G002900.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
maker-At_10-snap-gene-4.630-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GhM_A10G0041.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
maker-At_10_GB713-augustus-gene-0.211-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
maker-At_05_GB713-augustus-gene-10.209-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GhM_D05G1281.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GH_D05G01073_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Ghicr24_A10G002900.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gohir.A05G114350.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gh_A10G0023Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Ghir_A05G011720.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Gohir.D10G002600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GhirPD0501T114100.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Ghir_D05G011470.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
GhirPD1001T242000.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
A10G00330.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
maker-Dt_10-snap-gene-5.11-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
maker-Dt_10_GB713-augustus-gene-0.312-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Ghi_A10G00751Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
mk-At_10-snapG-4.630-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghi_D10G00126Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GhirPA0501T311000.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
CotAD_01550Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GH_D10G00031_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GH_A10G0026Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
D10G00330.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GhM_A05G1264.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
mk-At_05-snapG-11.1679mk-At_05-snapG-11.1679_AD1_PSC355Gossypium hirsutumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
mk-At_05-snapG-11.1679-mRNA-1:exon:1800_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1800_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1799_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1799_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1798_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1798_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1797_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1797_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1796_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1796_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1795_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1795_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1794_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1794_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1793_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1793_AD1_PSC355Gossypium hirsutumexon
mk-At_05-snapG-11.1679-mRNA-1:exon:1792_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:exon:1792_AD1_PSC355Gossypium hirsutumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_2Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_3Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_4Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_5Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_6Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_7Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_8Gossypium hirsutumCDS
mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1:cds_AD1_PSC355_9Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355Gossypium hirsutumpolypeptide
mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355-proteinGossypium hirsutumpolypeptide


Homology
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0B0M9S5_GOSAR (Kelch repeat-containing protein At3g27220-like OS=Gossypium arboreum OX=29729 GN=F383_19691 PE=4 SV=1)

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 328/370 (88.65%), Postives = 332/370 (89.73%), Query Frame = 0 
Query:   32 PFASHHHSNPNPIGHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLHGNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVF----KDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 397
            P A H  S    +GHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLD AAIQINDLLYVFAGYSTINHVHS VDIYNF DNSWGGRFDMPREMAHSH GMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH                DGKALEKEWRSEILIPPG GGGGTSQE  ++      +RLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSN IVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS
Sbjct:    4 PTAKHQASVTPRLGHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDGAAIQINDLLYVFAGYSTINHVHSQVDIYNFMDNSWGGRFDMPREMAHSHLGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH----------------DGKALEKEWRSEILIPPGAGGGGTSQECSLILLFHVANRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNSIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 357
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P5WYZ0_DURZI (Kelch repeat-containing protein At3g27220-like OS=Durio zibethinus OX=66656 GN=LOC111278893 PE=4 SV=1)

HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0
Identity = 298/374 (79.68%), Postives = 326/374 (87.17%), Query Frame = 0 
Query:   34 ASHHHSNPNPIGHGDNNV----KDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 397
            ++ + S+ +P  H D NV    KD RVLSAT+ DLPAP+L+W+KMA APVPRLD AAIQI +LLYVFAGY TI++VHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+YVVTGQYGPQCRGPTAHTFVLDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVK+GKA+EKEWRSEI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRRNEVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N IVIVGGTTEKHP+TKKMVLVGE+FQFN DTLKWSVI +LPYRVKTTLVGYWQGWLYF SGQRDKGPTDPA +KVIGEMWRTKL+LNS
Sbjct:   63 SNSNQSHESPSNHKDANVEEKSKDKRVLSATYADLPAPELKWQKMAAAPVPRLDGAAIQIKNLLYVFAGYGTIDYVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWRDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKEGKAIEKEWRSEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRNEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSIVIVGGTTEKHPITKKMVLVGEVFQFNLDTLKWSVIGKLPYRVKTTLVGYWQGWLYFTSGQRDKGPTDPAPRKVIGEMWRTKLQLNS 431
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6J1BCU6_9ROSI (Kelch repeat-containing protein At3g27220 isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110426320 PE=4 SV=1)

HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0
Identity = 292/349 (83.67%), Postives = 312/349 (89.40%), Query Frame = 0 
Query:   55 RVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 397
            R+LSATF DLPAPQL+WEKMA APVPRLD AAIQI +LLYVFAGY TI++VHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+YVVTGQYGPQCRGPTAHTFVLDT+T KW D PPLP+ RYAPATQLWRGRLH       N H PGLEHWSLAVKDGKALEKEWRSEI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRRNEVV+G+VYMLDDE+KWKTLPPM KPDSHIEFAW IV+N IVIVGGTTEKHPVTKKMVLVGE+FQFN DTLKWSVI +LP+RVKTTLVGYW+GWLYF SGQRDKGP+DPA KKVIGEMWRTKLKLNS
Sbjct:   87 RLLSATFADLPAPQLKWEKMAAAPVPRLDGAAIQIKNLLYVFAGYGTIDYVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETNKWQDMPPLPIPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALEKEWRSEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDEMKWKTLPPMPKPDSHIEFAWTIVNNSIVIVGGTTEKHPVTKKMVLVGEVFQFNLDTLKWSVIGKLPFRVKTTLVGYWRGWLYFTSGQRDKGPSDPAPKKVIGEMWRTKLKLNS 430
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6A2WUD4_HIBSY (Kelch repeat-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112758pilonHSYRG00030 PE=4 SV=1)

HSP 1 Score: 598.971 bits (1543), Expect = 0.000e+0
Identity = 283/351 (80.63%), Postives = 313/351 (89.17%), Query Frame = 0 
Query:   53 DGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 397
            DGRVLSATF DLPAP+L+W+KMA+APVPRLD AAIQI +LLYVFAGY TI++VHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTF+LDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGKALE EWRSEI IP GG         CVVFKDRLY+IGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDD++KWKTLPPM KPDSHIEFAWAIV+N IVI GGTTEKHP+TKKM+LVGE+FQFNFDTL+WSVI +LPYRVKTTLVG+WQGWLYF SGQRD+GP DPA +KVIGEMWRT+L+LNS
Sbjct:  134 DGRVLSATFADLPAPELKWDKMASAPVPRLDGAAIQIKNLLYVFAGYGTIDYVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFILDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALETEWRSEIPIPRGG-----PHRACVVFKDRLYIIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDDMKWKTLPPMPKPDSHIEFAWAIVNNSIVIAGGTTEKHPITKKMILVGEVFQFNFDTLEWSVIGKLPYRVKTTLVGFWQGWLYFTSGQRDRGPDDPAPRKVIGEMWRTRLRLNS 479
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A9D3ZNX1_9ROSI (Kelch repeat-containing protein OS=Gossypium stocksii OX=47602 GN=J1N35_039596 PE=4 SV=1)

HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0
Identity = 288/371 (77.63%), Postives = 317/371 (85.44%), Query Frame = 0 
Query:   32 PFASHHHSNPNPIGHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            PF S  +  P      + + KDGRVLSATF DLPAPQL+WEKMA APVPRLD AAIQI +LL+VFAGY TI+HVHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTF+LDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGKALE EWR+EI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N +VI GGTTEKHP+TKKM+LVGE+FQFN DTL+WSVI +LPYRVKTTLVG+WQ +LYF SGQRD+GP DPA +KVIGEMWRTKLKLN
Sbjct:   72 PFNSSANQKPKEKNVKEKS-KDGRVLSATFADLPAPQLKWEKMAPAPVPRLDGAAIQIKNLLFVFAGYGTIDHVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFILDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALETEWRNEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSLVIAGGTTEKHPITKKMILVGEVFQFNLDTLEWSVIGKLPYRVKTTLVGFWQEYLYFTSGQRDRGPDDPAPRKVIGEMWRTKLKLN 436
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5B6WA49_9ROSI (Kelch repeat-containing protein OS=Gossypium australe OX=47621 GN=EPI10_019289 PE=4 SV=1)

HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0
Identity = 288/368 (78.26%), Postives = 317/368 (86.14%), Query Frame = 0 
Query:   39 SNPNPIGHGDNNVK----DGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            +NP P    + NVK    DGRVLSATF DLPAPQL+WEKMA APVPRLD AAIQI +LL+VFAGY TI+HVHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTF+LDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGKALE EWR+EI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N ++I GGTTEKHP+TKKM+LVGE+FQFN DTL+WSVI +LPYRVKTTLVG+WQ +LYF SGQRD+GP DPA +KVIGEMWRTKLKLN
Sbjct:   77 ANPKP---KEKNVKEKSKDGRVLSATFADLPAPQLKWEKMAPAPVPRLDGAAIQIKNLLFVFAGYGTIDHVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFILDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALETEWRNEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSLIIAGGTTEKHPITKKMILVGEVFQFNLDTLEWSVIGKLPYRVKTTLVGFWQEYLYFTSGQRDRGPDDPAPRKVIGEMWRTKLKLN 436
[Close]
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A0D2T028_GOSRA (Kelch repeat-containing protein OS=Gossypium raimondii OX=29730 GN=B456_011G003000 PE=4 SV=1)

HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0
Identity = 285/357 (79.83%), Postives = 310/357 (86.83%), Query Frame = 0 
Query:   46 HGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            H     KDGRVLSATF DLPAPQL+WEKMA APVPRLD AAIQI +LL+VFAGY TI+HVHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTFVLDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGK LE EWR+EI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N +VI GGTTEKHP+TKKM+LVGE+FQFN DTL+WSVI +LPYRVKTTLVG+WQ +LYF SGQRD+GP DPA +KVIGEMWRTKLKLN
Sbjct:   85 HVKEKSKDGRVLSATFADLPAPQLKWEKMAPAPVPRLDGAAIQIKNLLFVFAGYGTIDHVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFVLDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKVLETEWRNEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSLVIAGGTTEKHPITKKMILVGEVFQFNLDTLEWSVIGKLPYRVKTTLVGFWQEYLYFTSGQRDRGPDDPAPRKVIGEMWRTKLKLN 436
[Close]
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2GGY1_GOSDA (Kelch repeat-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A05G121600v1 PE=4 SV=1)

HSP 1 Score: 593.578 bits (1529), Expect = 0.000e+0
Identity = 302/358 (84.36%), Postives = 303/358 (84.64%), Query Frame = 0 
Query:   45 GHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLHGNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQE-----GCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 397
            GHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDV                     +SHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQC GPTAHTFVLDTKTKKWHDFPPLPVSR                  PGLEHWSLAVKDGKALEKEWRSEILIPPGG             GCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEV WKTLPPMLKPDSHIEFAWAIVSN IVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS
Sbjct:   21 GHGDNNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDV---------------------NSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCSGPTAHTFVLDTKTKKWHDFPPLPVSR------------------PGLEHWSLAVKDGKALEKEWRSEILIPPGGWHHCNYAVYHVGVGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVNWKTLPPMLKPDSHIEFAWAIVSNSIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS 339
[Close]
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2T1K6_GOSMU (Kelch repeat-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D10G004000v1 PE=4 SV=1)

HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0
Identity = 284/351 (80.91%), Postives = 309/351 (88.03%), Query Frame = 0 
Query:   52 KDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            KDGRVLSATF DLPAPQL+WEKMA APVPRLD AAIQI +LL+VFAGY TI+HVHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTFVLDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGK LE EWR+EI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N +VI GGTTEKHP+TKKM+LVGE+FQFN DTL+WSVI +LPYRVKTTLVG+WQ +LYF SGQRD+GP DPA +KVIGEMWRTKLKLN
Sbjct:   91 KDGRVLSATFADLPAPQLKWEKMAPAPVPRLDGAAIQIKNLLFVFAGYGTIDHVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFVLDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKVLETEWRNEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSLVIAGGTTEKHPITKKMILVGEVFQFNLDTLEWSVIGKLPYRVKTTLVGFWQEYLYFTSGQRDRGPDDPAPRKVIGEMWRTKLKLN 436
[Close]
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2IY34_GOSTO (Kelch repeat-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G003600v1 PE=4 SV=1)

HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0
Identity = 284/351 (80.91%), Postives = 309/351 (88.03%), Query Frame = 0 
Query:   52 KDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            KDGRVLSATF DLPAPQL+WEKMA APVPRLD AAIQI +LL+VFAGY TI+HVHSHVDIYNFTDN+WGGRFDMP+EMAHSH GMVTDGRY+Y+VTGQYGPQCRGPTAHTFVLDT+TKKW D PPLPV RYAPATQLWRGRLH       N H PGLEHWSLAVKDGK LE EWR+EI IP GG         CVVFKDRLYVIGGQEGDFMAKPG+PIFKCSRR EVV+ +VYMLDDE+KWKTLPPM KPDSHIEFAWAIV+N +VI GGTTEKHP+TKKM+LVGE+FQFN DTL+WSVI +LPYRVKTTLVG+WQ +LYF SGQRD+GP DPA +KVIGEMWRTKLKLN
Sbjct:   91 KDGRVLSATFADLPAPQLKWEKMAPAPVPRLDGAAIQIKNLLFVFAGYGTIDHVHSHVDIYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYIVTGQYGPQCRGPTAHTFVLDTETKKWSDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKVLETEWRNEIPIPRGG-----PHRACVVFKDRLYVIGGQEGDFMAKPGSPIFKCSRRMEVVYSDVYMLDDEMKWKTLPPMPKPDSHIEFAWAIVNNSLVIAGGTTEKHPITKKMILVGEVFQFNLDTLEWSVIGKLPYRVKTTLVGFWQEYLYFTSGQRDRGPDDPAPRKVIGEMWRTKLKLN 436
[Close]
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy Swiss-Prot
Match: Y3272_ARATH (Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana OX=3702 GN=At3g27220 PE=2 SV=1)

HSP 1 Score: 473.781 bits (1218), Expect = 1.458e-165
Identity = 228/354 (64.41%), Postives = 276/354 (77.97%), Query Frame = 0 
Query:   49 NNVKDG-RVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKL 395
            N+ KD  R LSA F D+PAP+L+WE+M +APVPRLD  ++QIN+LLYVF+GY ++++VHSHVD++NFTDN W  RF  P+EMA+SH G+VTDGRY+YVV+GQ GPQCRGPT+ +FVLD+ TK W +FP LP  RYAPATQ+WRGRLH       N +    +HWS+AVKDGKAL+ EWR E+ IP GG         CVV  D+L VIGGQEGDFMAKP +PIFKCSRR E+  G VYM+D+E+KWK LPPM K +SHIE AW IV+N IVIVGGTT+ HPVTK++VLVGEIF+F  DTL WSVI  LPYRVKT + G+W G+LYF SGQRD+GP +P   KVIGEMWRTKLK 
Sbjct:   79 NDTKDHVRFLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFTDNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPRYAPATQIWRGRLHVMGGSKENRNAVAFDHWSIAVKDGKALD-EWREEVPIPRGG-----PHRACVVANDKLLVIGGQEGDFMAKPNSPIFKCSRRREIFNGEVYMMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIVGGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWNGYLYFTSGQRDRGPDNPQPGKVIGEMWRTKLKF 426
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. Araport11
Match: AT1G51540.1 (| Symbols: no symbol available | no full name available | chr1:19115702-19117381 FORWARD LENGTH=415)

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 268/354 (75.71%), Postives = 295/354 (83.33%), Query Frame = 0 
Query:   49 NNVKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLN 396
            ++VK+ R LS TF DLPAP+L+WEKMA +PVPRLD AAIQI DLLYVFAGY TI+ VHSHVDIYNFTDNSWGGRF+MP++MAHSH GMVTDGRY+Y+VTGQ+GPQCRGPTA TFVLDT T  W DF PLPV RYAPATQLWRGRLH       N   PGLEHWS+AVKDGK+LE EWRSEI IP GG         CVV  DRL+VIGGQEGDFMAKPG+PIFKCSRR EVVF +VYMLD+E+KWK +PPM KPDSHIEFAW +V+N IVIVGGTTEKHP TKKMVLVGEIFQFN +TLKW VI +LPYRVKTTL GYW G LYF SGQRDKGP DPA +KV+ EMWRTKL LN
Sbjct:   67 DSVKE-RKLSNTFQDLPAPELKWEKMAASPVPRLDGAAIQIRDLLYVFAGYGTIDLVHSHVDIYNFTDNSWGGRFNMPKDMAHSHLGMVTDGRYIYIVTGQFGPQCRGPTAKTFVLDTDTNTWKDFVPLPVPRYAPATQLWRGRLHVMGGSKENRFTPGLEHWSIAVKDGKSLENEWRSEIPIPRGG-----PHRACVVVDDRLFVIGGQEGDFMAKPGSPIFKCSRRMEVVFSDVYMLDEEMKWKVMPPMPKPDSHIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTLKWYVIGKLPYRVKTTLAGYWDGQLYFTSGQRDKGPDDPAPRKVMAEMWRTKLILN 414
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. Araport11
Match: AT3G27220.1 (| Symbols: HUP6 | HYPOXIA RESPONSE UNKNOWN PROTEIN 6 | chr3:10051742-10053594 REVERSE LENGTH=426)

HSP 1 Score: 473.781 bits (1218), Expect = 1.530e-166
Identity = 228/354 (64.41%), Postives = 276/354 (77.97%), Query Frame = 0 
Query:   49 NNVKDG-RVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYSTINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQYGPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLH------GNGHRPGLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIGGQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHIEFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELPYRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKL 395
            N+ KD  R LSA F D+PAP+L+WE+M +APVPRLD  ++QIN+LLYVF+GY ++++VHSHVD++NFTDN W  RF  P+EMA+SH G+VTDGRY+YVV+GQ GPQCRGPT+ +FVLD+ TK W +FP LP  RYAPATQ+WRGRLH       N +    +HWS+AVKDGKAL+ EWR E+ IP GG         CVV  D+L VIGGQEGDFMAKP +PIFKCSRR E+  G VYM+D+E+KWK LPPM K +SHIE AW IV+N IVIVGGTT+ HPVTK++VLVGEIF+F  DTL WSVI  LPYRVKT + G+W G+LYF SGQRD+GP +P   KVIGEMWRTKLK 
Sbjct:   79 NDTKDHVRFLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFTDNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPRYAPATQIWRGRLHVMGGSKENRNAVAFDHWSIAVKDGKALD-EWREEVPIPRGG-----PHRACVVANDKLLVIGGQEGDFMAKPNSPIFKCSRRREIFNGEVYMMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIVGGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWNGYLYFTSGQRDRGPDNPQPGKVIGEMWRTKLKF 426
The following BLAST results are available for this feature:
BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A0B0M9S5_GOSAR0.000e+088.65Kelch repeat-containing protein At3g27220-like OS=... [more]
A0A6P5WYZ0_DURZI0.000e+079.68Kelch repeat-containing protein At3g27220-like OS=... [more]
A0A6J1BCU6_9ROSI0.000e+083.67Kelch repeat-containing protein At3g27220 isoform ... [more]
A0A6A2WUD4_HIBSY0.000e+080.63Kelch repeat-containing protein OS=Hibiscus syriac... [more]
A0A9D3ZNX1_9ROSI0.000e+077.63Kelch repeat-containing protein OS=Gossypium stock... [more]
A0A5B6WA49_9ROSI0.000e+078.26Kelch repeat-containing protein OS=Gossypium austr... [more]
A0A0D2T028_GOSRA0.000e+079.83Kelch repeat-containing protein OS=Gossypium raimo... [more]
A0A5D2GGY1_GOSDA0.000e+084.36Kelch repeat-containing protein OS=Gossypium darwi... [more]
A0A5D2T1K6_GOSMU0.000e+080.91Kelch repeat-containing protein OS=Gossypium muste... [more]
A0A5D2IY34_GOSTO0.000e+080.91Kelch repeat-containing protein OS=Gossypium tomen... [more]
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
Y3272_ARATH1.458e-16564.41Kelch repeat-containing protein At3g27220 OS=Arabi... [more]
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BLAST of mk-At_05-snapG-11.1679-mRNA-1 vs. Araport11
Analysis Date: 2023-10-30 (BLASTP of USDA v1.0 G. hirsutum (AD1) PSC355 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G51540.10.000e+075.71| Symbols: no symbol available | no full name avai... [more]
AT3G27220.11.530e-16664.41| Symbols: HUP6 | HYPOXIA RESPONSE UNKNOWN PROTEI... [more]
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InterPro
Analysis Name: InterProScan Analysis for USDA v1.0 G. hirsutum (AD1) PSC355 proteins
Date Performed: 2023-10-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 80..126
e-value: 8.1E-7
score: 40.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availablePANTHERPTHR46773coord: 48..394
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 216..397
e-value: 4.7E-15
score: 57.2
coord: 43..197
e-value: 3.4E-22
score: 80.7
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 69..320
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 286..377
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 132..178
e-value: 0.11
score: 23.4

Sequences
The following sequences are available for this feature:

mRNA sequence

>mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355 ID=mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355; Name=mk-At_05-snapG-11.1679-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=1194bp
TGCAACTTGAACCCAAAACCGAAAGACAAAGTAAGGAATGGTGAGACCGA
CAGCGAAGCACCAGGCATCGGTGACGCCGAGATTGATGCCCCTCCATTTG
CTTCCCACCATCACTCAAACCCCAACCCCATAGGGCATGGAGACAATAAT
GTTAAGGATGGCAGAGTGTTGTCAGCTACTTTTTTTGATTTGCCTGCTCC
TCAACTCGAATGGGAGAAGATGGCAACTGCACCTGTTCCTCGTCTTGATG
TTGCTGCTATTCAGATTAACGATCTTCTTTATGTCTTTGCTGGATATAGC
ACCATTAACCACGTGCATTCACACGTTGATATATACAATTTTACGGATAA
TTCATGGGGAGGAAGATTTGATATGCCAAGAGAAATGGCGCACTCACATT
TTGGTATGGTAACAGATGGACGATATATGTACGTGGTCACTGGACAATAT
GGTCCTCAATGCAGGGGTCCTACGGCTCACACATTCGTTCTCGACACTAA
GACGAAGAAATGGCATGACTTCCCCCCTTTGCCAGTCTCTAGGTATGCAC
CAGCCACTCAACTTTGGAGAGGTCGACTTCATGGGAATGGGCATAGACCT
GGGCTAGAGCATTGGAGTCTTGCTGTGAAGGATGGGAAAGCATTAGAAAA
GGAGTGGAGGAGTGAAATACTCATTCCACCGGGGGGTGGGGGGGGGGGAA
CCTCACAGGAGGGCTGTGTTGTGTTTAAAGATCGTCTTTATGTTATTGGG
GGCCAGGAGGGTGATTTTATGGCTAAACCTGGAGCACCTATTTTCAAATG
CTCCCGAAGGAACGAAGTTGTATTTGGTAATGTATACATGTTGGATGACG
AAGTGAAGTGGAAAACATTACCTCCTATGCTAAAGCCAGATTCACATATT
GAATTTGCTTGGGCAATCGTTAGCAATTACATTGTTATTGTTGGAGGCAC
AACAGAGAAACACCCTGTAACGAAAAAGATGGTTCTGGTTGGAGAAATAT
TTCAGTTCAATTTTGATACACTGAAGTGGTCGGTGATTAGAGAACTTCCA
TACCGGGTGAAAACCACACTGGTCGGGTATTGGCAAGGATGGCTGTATTT
CATATCAGGGCAGCGAGACAAAGGGCCAACCGATCCGGCACAAAAGAAGG
TCATTGGAGAAATGTGGAGAACCAAATTAAAATTGAACTCATAA
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protein sequence of mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355

>mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355 ID=mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355; Name=mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355; organism=Gossypium hirsutum; type=polypeptide; length=397bp
CNLNPKPKDKVRNGETDSEAPGIGDAEIDAPPFASHHHSNPNPIGHGDNN
VKDGRVLSATFFDLPAPQLEWEKMATAPVPRLDVAAIQINDLLYVFAGYS
TINHVHSHVDIYNFTDNSWGGRFDMPREMAHSHFGMVTDGRYMYVVTGQY
GPQCRGPTAHTFVLDTKTKKWHDFPPLPVSRYAPATQLWRGRLHGNGHRP
GLEHWSLAVKDGKALEKEWRSEILIPPGGGGGGTSQEGCVVFKDRLYVIG
GQEGDFMAKPGAPIFKCSRRNEVVFGNVYMLDDEVKWKTLPPMLKPDSHI
EFAWAIVSNYIVIVGGTTEKHPVTKKMVLVGEIFQFNFDTLKWSVIRELP
YRVKTTLVGYWQGWLYFISGQRDKGPTDPAQKKVIGEMWRTKLKLNS
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mRNA from alignment at A05:10742573..10746897-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355 ID=mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355; Name=mk-At_05-snapG-11.1679-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=4325bp; location=Sequence derived from: A05:10742573..10746897- (Gossypium hirsutum
TGCAACTTGAACCCAAAACCGAAAGACAAAGTAAGGAATGGTGAGACCGA
CAGCGAAGCACCAGGCATCGGTGACGCCGAGATTGGTATTGCTTTGCGTT
GGTCTACTGGGAATCGGCCGCTTCATTGAGGGCTTCTTCATCTCCTTCCT
TCAATCCTTATCTTTCTCTCTCTTTCTTTTTCCAGCAATTGGTCTCTTCT
TTCTTCAGATGCCCCTCCATTTGCTTCCCACCATCACTCAAACCCCAACC
CCATAGTAAACCCAACACTCTCTTACTTCTTTATCTTTCAATTTCTTAGA
TCACTGGGGGAACTCCCACTTCATCAATTCTGTTTACTTACTCCTTTGGT
GGTGTTGCAGGGGCATGGAGACAATAATGTTAAGGATGGCAGAGTGTTGT
CAGCTACTTTTTTTGATTTGCCTGCTCCTCAACTCGAATGGGAGAAGATG
GCAACTGCACCTGTTCCTCGTCTTGATGTTGCTGCTATTCAGATTAACGA
TCTTCTTTATGTCTTTGCTGGATATAGCACCATTAACCACGTTAGTTAGT
TACTTAACACTACCCTTTCTACCTTTTCTTATGTACTATGCTTTGCCTTT
TCTTTTTCTTTTTCTTTTTTCTTTTTACTTTCTTTACTTCCTGGGGACTG
CATTTTCGACTTCTTCTATGGTGATTTTGGAGCATGTATATTTGTGTTAA
ATAGAGTTATGCTTCTCAGTATTGTTTTCTTCTTCGCTTGCAATGTTTGT
ATCATAGGTGCATTCACACGTTGATATATACAATTTTACGGATAATTCAT
GGGGAGGAAGATTTGATATGCCAAGAGAAATGGCGCACTCACATTTTGGT
ATGGTAACAGATGGACGATATATGTACGTGGTCACTGGACAATATGGTCC
TCAATGCAGGGGTCCTACGGCTCACACATTCGTTCTCGACACTAAGACGA
AGAAATGGCATGACTTCCCCCCTTTGCCAGTCTCTAGGTATGTGTATATA
TCAATCAAGTTATGTTGGAGGTATATAGTAACTGTGGAGGAAACAGAATG
TTCTTGTCCCTGATAAACTGTGTATGTTTATAAGTGTTAATGTGTACACT
CTACACGTGCATTGTGATGGGTAAACAGTAGGCTGTTCCATAGAGAAACC
TTGTCTGCATAAAATGAGTGATAAAGATGTTTGAAGGAAAAACAGCTGGA
CTTTCATTCAGAATTCTGCCTGTTTGGGTGTTTTTGCATGTATAACACTT
TATAGTTGCTTGTCAGTTCTATTACTCGGACTCCATTTTTCCCTAGGTTA
GTACGTGTGTGAGCTCTCTTTAATGTATCTAACCTGCATTGTGGAAAAGA
AAAATGATTTTGTTCAATGTAGTTTCTACTGCTTGCTTTCCTATCACTTT
GTGTAAGTTGTATCTGGCTTTTTTTATTGGTTTGATGAGTTTCCTTTGTT
CTTTGCTTTCAATTCTGCTTCATAAGGCCTGAACTTGTCTGCATAATTTG
CCGAGTATCTAATGACAAAAGAGATGATCTGCTACAATTCTTTTCTGCTT
ATTCAACAATCCTATAGAACAATAAATTGCATATTTATCATTAATTTATA
AAATTGATCCTCTGAGTTTGCGGTTCAACTTCAATGCTATTTTGCAATTC
TAACTATAGTTTTGGTTGTCTTATCCTCTCTCTCTCATCCTTGCTTTTCA
TTTTTTCCTCTTCTTGGATATGTTGCCTTGTTAATCCGTTTTTCTTGCTT
TTTTGTTGTTTTTTGATGAAGATATTATACATCTACTGAAGTTTATGTGG
TTTAAGTGGCAATGCACTTGAGTATTTTCAGGTATGCACCAGCCACTCAA
CTTTGGAGAGGTCGACTTCATGTGATGGGTGGCAGCTAGGGGAATGGGCA
TAGACCTGGGCTAGAGCATTGGAGTCTTGCTGTGAAGGATGGGAAAGCAT
TAGAAAAGGAGTGGAGGAGTGAAATACTCATTCCACCGGGGGGTGGGGGG
GGGGGAACCTCACAGGAGTGTTCTCTAATATTGCTTTTCCATGTTGCAAG
TTGATTGATTATTCTTTTTGTGAATTTTTTGGAATTGGATGCATGTTCTT
GATTACAATGTCATACATTTGGATTATGAATTCATAGCATCTTATCTTGA
TGATTTATACATTTTTGTATTATAGAAATCCGAACAGATGTATACATGCA
GGTTTAGTTTTTACCATTAATGAAATGGTATGTAAAACAAATTGAGACAA
TAATTTCAGGATGGCATCACTGCAATTATGCTGTATATCATGTGGGGGTG
TTAGAAATTTTTAGTTTTAATCTTCAGTTGCTGATATGTTGTTCTAATGT
GTTTTTCTTTATATCTTTAAGCCATAATACATATTGCATGAACACAATTT
CATTATCTAATTTAGAAAAAGCAAGCAATGTAAACACTGAAATATTTGGA
ACTGTTGTCCTTGATTATTAAAAGGCTGCTTTCGTCATATCATACGAGCA
TCTATTTGTTTTTGGGAGCCAATAAAATAACATGTTGATTTCAGTTGTGC
ATTCCTCGTGTAGTCTCACCTAAACTTCGTCTTTCAAATGTCATTAATGT
AGGGGCTGTGTTGTGTTTAAAGATCGTCTTTATGTTATTGGGGGCCAGGA
GGGTGATTTTATGGCTAAACCTGGAGCACCTATTTTCAAATGCTCCCGAA
GGAACGAAGTAAGGAGGACATTTGTTTTTTTCTTGAGAGTTCTCTCGATT
GGCCTTTTTAATAATAGTATATTATTTTGTTGGTCTGTTTCCTTTAAAGC
ATTCTATATCATTTTATGATTGTAATTGGCACGTATTCATGTCCTGCATG
TTGATCTCTTTTCTTAAACCACAAGCTTTACTGATATTATCAGGAATATT
GGCAAAATAAAAGTTATGCTTGCTATGCTGTTTCCTCTGTCCTGTGCATG
TATTCATCTGTGAGTATTTTATGATACATGATAAATGCGATGTGATATAA
TACTGTGGATAAATGGGTTTAGCTAACTGATTGATTATATATTTTACAAA
ATGTGTTTCAAACTAGACGATGTAGGTTCTGTCTAATGTCAGGTTATTGC
ATCTCTACCGTTCTTTGCTAAATTTTCTATGAATAATATATTTTCCTGTA
AATATATATATATATATATATGGAGCCTTAAAATTAACTTATTTTCTAAT
TCTGCTTCAGGTTGTATTTGGTAATGTATACATGTTGGATGACGAAGTGA
AGTGGAAAACATTACCTCCTATGCTAAAGCCAGATTCACATATTGAATTT
GCTTGGGCAATCGTTAGCAATTACATTGTTATTGTTGGAGGCACAACAGA
GAAACACCCTGTAACGAAAAAGATGGTTCTGGTTGGAGAAATATTTCAGT
TCAATTTTGATACACTGGTATTATCTTCTTATCTTTGTACAGTTGCGTAA
AGAAGATTTTCATATATATATATATGCATGTTTATGCTTATACTCACATA
GTTTGGATGATTTGCATTCTATTCTATTATTCATACACACGTCTGCAAAA
AGGCATGTGTACGTAGTTATGCACAGAGCACCCCCATGGCTGCCCAGACA
TGTGTCAAGTGGAGTTGCTGCTGTTATTCAGCCTTTTCTAGCTTATATGC
AGACTACAATCTTCAGCCTAGTAGTTTTCACATTTGGCTGAAAGCATCAC
TTGGTTTTATTTTTTGACTGCCAGACTTCATTGCTTTCCCTCTATTACCG
GTGGGGGTCATTGTGCACCAAGTGTTAAAAACGAGTACAGATGCATATGT
ATGTATGTGTGTATGAATGTATGTATGTATGCATGCATGCTTTTGAGTCA
ATTCCTTACGATGTTGATTGCATTTCAGAATTCAGATATTTCCCATACGC
ACTTCCATCTTAATTAGTAAAAGGTCTTTGATTAAATATATTGCATTTAA
AACTGGGACTCAACTTTGTATGGAACACTTTCGAGTTTACTGCATCAAGA
AGACATGATAATCATTGTATATAATTGATACGCGTGAAACCTCAAAATAT
GATACTACATTCTGCATGTTCTTTGCACTAAACAACAGAGTATTCTTCAT
GTGTTTTTTCAAATTATTTTATAAGGTCTGATGTTTGTGACACTGCTTTA
ACAGAAGTGGTCGGTGATTAGAGAACTTCCATACCGGGTGAAAACCACAC
TGGTCGGGTATTGGCAAGGATGGCTGTATTTCATATCAGGGCAGCGAGAC
AAAGGGCCAACCGATCCGGCACAAAAGAAGGTCATTGGAGAAATGTGGAG
AACCAAATTAAAATTGAACTCATAA
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Coding sequence (CDS) from alignment at A05:10742573..10746897-

>mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355 ID=mk-At_05-snapG-11.1679-mRNA-1_AD1_PSC355; Name=mk-At_05-snapG-11.1679-mRNA-1; organism=Gossypium hirsutum; type=CDS; length=1194bp; location=Sequence derived from: A05:10742573..10746897- (Gossypium hirsutum
TGCAACTTGAACCCAAAACCGAAAGACAAAGTAAGGAATGGTGAGACCGA
CAGCGAAGCACCAGGCATCGGTGACGCCGAGATTGATGCCCCTCCATTTG
CTTCCCACCATCACTCAAACCCCAACCCCATAGGGCATGGAGACAATAAT
GTTAAGGATGGCAGAGTGTTGTCAGCTACTTTTTTTGATTTGCCTGCTCC
TCAACTCGAATGGGAGAAGATGGCAACTGCACCTGTTCCTCGTCTTGATG
TTGCTGCTATTCAGATTAACGATCTTCTTTATGTCTTTGCTGGATATAGC
ACCATTAACCACGTGCATTCACACGTTGATATATACAATTTTACGGATAA
TTCATGGGGAGGAAGATTTGATATGCCAAGAGAAATGGCGCACTCACATT
TTGGTATGGTAACAGATGGACGATATATGTACGTGGTCACTGGACAATAT
GGTCCTCAATGCAGGGGTCCTACGGCTCACACATTCGTTCTCGACACTAA
GACGAAGAAATGGCATGACTTCCCCCCTTTGCCAGTCTCTAGGTATGCAC
CAGCCACTCAACTTTGGAGAGGTCGACTTCATGGGAATGGGCATAGACCT
GGGCTAGAGCATTGGAGTCTTGCTGTGAAGGATGGGAAAGCATTAGAAAA
GGAGTGGAGGAGTGAAATACTCATTCCACCGGGGGGTGGGGGGGGGGGAA
CCTCACAGGAGGGCTGTGTTGTGTTTAAAGATCGTCTTTATGTTATTGGG
GGCCAGGAGGGTGATTTTATGGCTAAACCTGGAGCACCTATTTTCAAATG
CTCCCGAAGGAACGAAGTTGTATTTGGTAATGTATACATGTTGGATGACG
AAGTGAAGTGGAAAACATTACCTCCTATGCTAAAGCCAGATTCACATATT
GAATTTGCTTGGGCAATCGTTAGCAATTACATTGTTATTGTTGGAGGCAC
AACAGAGAAACACCCTGTAACGAAAAAGATGGTTCTGGTTGGAGAAATAT
TTCAGTTCAATTTTGATACACTGAAGTGGTCGGTGATTAGAGAACTTCCA
TACCGGGTGAAAACCACACTGGTCGGGTATTGGCAAGGATGGCTGTATTT
CATATCAGGGCAGCGAGACAAAGGGCCAACCGATCCGGCACAAAAGAAGG
TCATTGGAGAAATGTGGAGAACCAAATTAAAATTGAACTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding