Pima-S7 x NemX, F2 (2011) | Cottongen

Map Overview


Name	Pima-S7 x NemX, F2 (2011)
Species	Gossypium barbadense x hirsutum
Analysis method	Chi-squared goodness-of-fit
Software	JoinMap v3.0
Map type	genetic
Population type	F2
Genome group	AD
Map unit	cM
Maternal parent	Pima S-7
Paternal parent	Acala Nem-X
Population size	94
Number of loci	10
Number of QTL	2
Number of linkage groups	1
Publication	[view all]
Contact	Ulloa, Mauricio

Stock

Name

Type

Details

Pima-S7 x NemX, F2

population

Population size:	94
Secondary id:	cdbpop_000136
Description:	genetic mapping
Alias:	PN-F2

Contact

Name

Details

Ulloa, Mauricio

Description:	Breeding, genetics, and Genomics
First name:	Mauricio
Last name:	Ulloa
Title:	Research Geneticist
Institution:	USDA-ARS, W.I.C.S., Res. Unit
Address:	17053 N. Shafter Ave., Shafter, California 93263
Country:	United States
Email:	mauricio.ulloa@usda.gov
Phone:	661-746-8009
Fax:	746-746-1619
Keywords:	Breeding and Genomics
Last update:	27-Apr-2010

Publication


Year	Publications
2011	Ulloa M, Wang C, Hutmacher RB, Wright SD, Davis RM, Saski CA, Roberts PA. Mapping fusarium wilt race 1 resistance genes in cotton by inheritance, QTL and sequencing composition. Molecular genetics and genomics MGG. 2011; 286(1):21-36.

Map Loci

This map contains 10 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Pima-S7 x NemX, F2 (2011).chr16	MUCS0594	MUCS594_269b	marker_locus	0 cM
Pima-S7 x NemX, F2 (2011).chr16	MUSB0812	MUSB0812_452h	marker_locus	0.6 cM
Pima-S7 x NemX, F2 (2011).chr16	MUCS0616	MUCS616_256b	marker_locus	10.7 cM
Pima-S7 x NemX, F2 (2011).chr16	me_ATA/em_ATG	me_ATA/em_ATG	marker_locus	31.1 cM
Pima-S7 x NemX, F2 (2011).chr16	BNL3008	BNLI3008_150/139	marker_locus	33.3 cM
Pima-S7 x NemX, F2 (2011).chr16	Gh295	Gh295_86/100	marker_locus	34.3 cM
Pima-S7 x NemX, F2 (2011).chr16	M-CAA_E-AGC-169	M-CAA_E-AGC-169	marker_locus	35.5 cM
Pima-S7 x NemX, F2 (2011).chr16	M-CAA_E-AAC-85	M-CAA_E-AAC-85	marker_locus	40.2 cM
Pima-S7 x NemX, F2 (2011).chr16	Gh345	Gh345_116/126	marker_locus	42.8 cM
Pima-S7 x NemX, F2 (2011).chr16	MUSB0812	MUSB0812_412/401	marker_locus	52.3 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Pima-S7 x NemX, F2 (2011).chr16	qFWR.PN-F2_ch16.1	QTL	48 cM	49 cM	48.5 cM
Pima-S7 x NemX, F2 (2011).chr16	qFWR.PN-F2_ch16.2	QTL	51.3 cM	52.3 cM	52 cM

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