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Marker Overview
| Name | BNL3008 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3008_orig
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| Source Type | genomic |
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| Repeat Motif | (GA)13 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3008_F: ATCTCAGATTTAAACATATAATAGAGGG |
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| Primer 2 | BNL3008_R: TAAAATGAAGGCCATCAGGC |
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| Polymorphism | P_ BNL3008 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch16_Dt.07 | N/A | 78.54 | BNL3008 | View |
| 2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch16_Dt.07 | N/A | 127.5 | BNL3008 | View |
| 3 | Palmeri x K-101, F2 (2007) | AD_ch16_Dt.07 | N/A | 81.5 | BNL3008 | View |
| 4 | TM-1 x 3-79, RIL (2006) | AD_ch16_Dt.07 | N/A | 63.4 | BNL3008 | View |
| 5 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch16_Dt.07 | N/A | 81.8 | BNL3008 | View |
| 6 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch16_Dt.07 | N/A | 69 | BNL3008 | View |
| 7 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch16_Dt.07 | N/A | 78.57 | BNL3008 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch16_Dt.07 | N/A | 116 | BNL3008 | View |
| 9 | TM-1 x 3-79, RIL (2012) | AD_ch16_Dt.07 | N/A | 49.75 | BNL3008 | View |
| 10 | TM-1 x 3-79, RIL (2014) | AD_ch16_Dt.07 | N/A | 75.6 | BNL3008 | View |
| 11 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch16_Dt.07 | N/A | 75.1 | BNL3008 | View |
| 12 | Monsanto SSR Bin Map, (2009) | AD_ch16_Dt.07 | N/A | 141 | BNL3008 | View |
| 13 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch16_Dt.07 | N/A | 95 | BNL3008a | View |
| 14 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch16_Dt.07 | N/A | 95 | BNL3008b | View |
| 15 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch16_Dt.07 | N/A | 43 | BNL3008-127 | View |
| 16 | TM-1 x Hai-7124, BC1 (2007) | AD_ch16_Dt.07 | N/A | 63.5 | BNL3008-135 | View |
| 17 | TM-1 x Hai-7124, BC1 (2008) | AD_ch16_Dt.07 | N/A | 62.9 | BNL3008-135 | View |
| 18 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch16_Dt.07 | N/A | 64 | BNL3008-135 | View |
| 19 | H16 x T586, F2 (2009) | AD_ch16_Dt.07 | N/A | 62.9 | BNL3008-135 | View |
| 20 | TM-1 x Hai-7124, BC1 (2012) | AD_ch16_Dt.07 | N/A | 68.6 | BNL3008-135 | View |
| 21 | Pima-S7 x NemX, F2 (2011) | AD_ch16_Dt.07 | N/A | 33.3 | BNLI3008_150/139 | View |
| 22 | TM-1 x 3-79, RIL (2011) | AD_ch16_Dt.07 | N/A | 15.3 | BNL3008_144/155 | View |
| 23 | TM-1 x 3-79, RIL (2012.v3) | AD_ch16_Dt.07 | N/A | 75.58 | BNL3008 | View |
| 24 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch16_Dt.07 | N/A | 70.3 | BNL3008 | View |
Sequence
>BNL3008 ID=BNL3008; Name=BNL3008; organism=Gossypium hirsutum; type=genetic_marker; length=133bp
ATCTCAGATTTAAACATATAATAGAGGGACTAAAACTAAAATTTAACATT
TTCCTATAATGGAGAGAGAGAGAGAGAGAGAGAGAGAATCACATACATGT
TAACAGAAGGAATGCCTGATGGCCTTCATTTTA
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