Name	3T-F2-2017
Type	QTL
Description	GWAS for agronomic traits in Upland cotton using high-density SNPs
Contact	Lin, Zhong-Xu

Name
short fiber content
fruit branch node number
fiber elongation
first fruit branch position by node
days to 50% flowering
plant height
boll number
micronaire
fiber length
seed cotton weight per boll
lint yield
days to 50% boll opening
lint percent
first fruit branch position
fiber uniformity
fiber strength

Year	Publication
2017	Huang C, Nie X, Shen C, You C, Li W, Zhao W, Zhang X, Lin Z. Population structure and genetic basis of the agronomic traits of upland cotton in China revealed by a genome-wide association study using high-density SNPs. Plant Biotechnol J. 2017 Nov;15(11):1374-1386.

Linkage Group	Name	Type	Start	Stop	Peak
3-79 x TM-1, F2 (2015 SNP).chr20	qSFC.3T-F2_c20	QTL	63.2	64.53	64.11
3-79 x TM-1, F2 (2015 SNP).chr25	qSFC.3T-F2_c25	QTL	89.86	89.93	89.92
3-79 x TM-1, F2 (2015 SNP).chr26	qSFC.3T-F2_c26	QTL	81.15	81.36	81.35
3-79 x TM-1, F2 (2015 SNP).chr02	qUHML.3T-F2_c02	QTL	65.81	66.32	65.81
3-79 x TM-1, F2 (2015 SNP).chr10	qUHML.3T-F2_c10	QTL	44	44.06	44.02
3-79 x TM-1, F2 (2015 SNP).chr16	qUHML.3T-F2_c16	QTL	47.59	47.62	47.61
3-79 x TM-1, F2 (2015 SNP).chr17	qUHML.3T-F2_c17	QTL	97.88	97.94	97.9
3-79 x TM-1, F2 (2015 SNP).chr20	qUHML.3T-F2_c20.1	QTL	35.51	39.86	39.83
3-79 x TM-1, F2 (2015 SNP).chr20	qUHML.3T-F2_c20.2	QTL	111.58	111.64	111.6
3-79 x TM-1, F2 (2015 SNP).chr21	qUHML.3T-F2_c21	QTL	91.97	92.01	92