Ghir_A01G007360.1_HAU-AD1_v1.0, Ghir_A01G007360.1_HAU-AD1_v1.0 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1029084547|ref|XP_016702474.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium hirsutum] >gi|1347701463|gb|PPS00600.1| hypothetical protein GOBAR_AA20057 [Gossypium barbadense]) HSP 1 Score: 286.574 bits (732), Expect = 8.437e-98 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1050634018|ref|XP_017640008.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium arboreum]) HSP 1 Score: 284.263 bits (726), Expect = 5.105e-97 Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAI+LALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGE+CVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIILALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEFCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|823132058|ref|XP_012461038.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium raimondii] >gi|1029094876|ref|XP_016707248.1| PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium hirsutum] >gi|763746288|gb|KJB13727.1| hypothetical protein B456_002G091800 [Gossypium raimondii]) HSP 1 Score: 281.952 bits (720), Expect = 4.340e-96 Identity = 138/141 (97.87%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASD+RKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCV+PSFN+KHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDDRKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVNPSFNKKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1344118951|gb|PPD91892.1| (hypothetical protein GOBAR_DD11160 [Gossypium barbadense]) HSP 1 Score: 280.411 bits (716), Expect = 2.179e-95 Identity = 137/141 (97.16%), Postives = 140/141 (99.29%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASD+RKDDVNDATIESSDYSSAQGRWLLQTKRT RVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCV+PSFN+KHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDDRKDDVNDATIESSDYSSAQGRWLLQTKRTHRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVNPSFNKKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1029083939|ref|XP_016702151.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium hirsutum] >gi|1050634020|ref|XP_017640009.1| PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium arboreum] >gi|1347701464|gb|PPS00601.1| hypothetical protein GOBAR_AA20058 [Gossypium barbadense]) HSP 1 Score: 222.246 bits (565), Expect = 2.595e-72 Identity = 119/145 (82.07%), Postives = 127/145 (87.59%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAAS--DERKD--DVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL+FVSVL +VL L SAAS D ++D D NDA ++SS Y SAQGRWLLQ KRTRRVTCKKFP ICDAKGSPGPQCCKKKCVNILTDR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE+CVFGLCNYA
Sbjct: 1 MKFTKLIFVSVLIVVLVLCTSAASNLDHQQDTTDFNDAIMDSSKYYSAQGRWLLQNKRTRRVTCKKFPRICDAKGSPGPQCCKKKCVNILTDRHNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGEFCVFGLCNYA 145
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|823132056|ref|XP_012461029.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium raimondii] >gi|1029094873|ref|XP_016707247.1| PREDICTED: stigma-specific STIG1-like protein 1 [Gossypium hirsutum] >gi|763746297|gb|KJB13736.1| hypothetical protein B456_002G091700 [Gossypium raimondii] >gi|1344118950|gb|PPD91891.1| hypothetical protein GOBAR_DD11159 [Gossypium barbadense]) HSP 1 Score: 221.861 bits (564), Expect = 2.992e-72 Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAAS--DERKD--DVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KLVFVSVL +V+ LS SAAS D ++D D NDA ++SS+YSSAQGRWLLQ KRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE+CVFGLCNYA
Sbjct: 1 MKFTKLVFVSVLIVVIVLSTSAASNLDHQQDTTDFNDAIMDSSEYSSAQGRWLLQNKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRHNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGEFCVFGLCNYA 145
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1269969396|ref|XP_022735105.1| (stigma-specific STIG1-like protein 1 [Durio zibethinus]) HSP 1 Score: 211.46 bits (537), Expect = 5.769e-68 Identity = 109/150 (72.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKD-------DVNDATIESSDY--SSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL FVSVLA+VL LSISAA + D D NDAT+ S+Y A+GR LLQ KRTRR+TC KFP IC AKGS GPQCCKKKCVNIL DR NCGKCGKKCKYNEICCKGKCV+PSFNR+HCGGCN RC +GE CVFGLCNYA
Sbjct: 1 MKFPKLFFVSVLAMVLVLSISAAPNFDSDNHSAAVEDDNDATMHVSEYVPDEAEGRLLLQKKRTRRITCNKFPRICHAKGSLGPQCCKKKCVNILMDRLNCGKCGKKCKYNEICCKGKCVNPSFNRRHCGGCNKRCSDGELCVFGLCNYA 150
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1063514677|ref|XP_007020751.2| (PREDICTED: stigma-specific STIG1-like protein 1 [Theobroma cacao]) HSP 1 Score: 208.764 bits (530), Expect = 7.831e-67 Identity = 105/153 (68.63%), Postives = 119/153 (77.78%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISA-ASDERKDDVNDATIESSDYSSAQ-----------GRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL+F S+L +VL LSI+A AS +++DD N+ + D + A+ GR LLQ KRTRR+TC KFP IC A+GSPGPQCCKKKCVNIL DR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE CVFGLCNYA
Sbjct: 1 MKFIKLLFASILVMVLVLSIAATASLDQQDDTNNKSAAEEDDNDAETKQRFMLDETEGRSLLQKKRTRRLTCNKFPRICHARGSPGPQCCKKKCVNILMDRLNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGELCVFGLCNYA 153
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|508720379|gb|EOY12276.1| (Stigma-specific Stig1 family protein, putative [Theobroma cacao]) HSP 1 Score: 204.527 bits (519), Expect = 3.076e-65 Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISA-ASDERKDDVNDATIESSDYSSAQ-----------GRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL+F S+L +VL LSI+A AS +++DD ++ + D + A+ GR LLQ KRTRR+ C KFP IC A+GSPGPQCCKKKCVNIL DR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE CVFGLCNYA
Sbjct: 1 MKFIKLLFASILVMVLVLSIAATASLDQQDDTDNKSAAEEDDNDAETKQRFMLDETEGRSLLQKKRTRRLNCNKFPRICHARGSPGPQCCKKKCVNILMDRLNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGELCVFGLCNYA 153
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Match: gi|1137213819|gb|OMO81591.1| (Stigma-specific protein Stig1 [Corchorus olitorius]) HSP 1 Score: 190.274 bits (482), Expect = 1.784e-59 Identity = 99/163 (60.74%), Postives = 116/163 (71.17%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASD-----ERKDDV-----------NDATIES------SDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MK +L+FV VLA++L LSI+A + + DD NDA E+ SD +GR LLQ KRT+R+TC KFP IC AKGSPGPQCCKKKCVNIL DR NCGKCGKKCK++EICCKGKCV+PSFN+KHCGGCNN+C NG CVFGLC+YA
Sbjct: 1 MKLTRLIFVLVLAMILVLSIAATPNNLYQQDDDDDTGNYVAAEDQNDNDAMSETEQVSGLSDDIETEGRLLLQKKRTKRLTCNKFPKICRAKGSPGPQCCKKKCVNILIDRHNCGKCGKKCKFSEICCKGKCVNPSFNKKHCGGCNNKCSNGGSCVFGLCDYA 163
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.304e-24 Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 10 SVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVT---------------CKKFPGICDAKG--SPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
+VL I+L +SI+ V++ E+ + Q + L+ T R R C K IC ++G + CC KCV++ D NCG C +CK+ + CC+G+CV +++++HCG CN+ C GE+CV+GLCNYA
Sbjct: 6 TVLTILLTISIAIMVLIATVFVSNNKTETLLQTHTQTQTLITTGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.072e-20 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 60 CKKFPGICDAKGSPGPQ----CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
C + P IC G G CC KC+++ +D NCG C KCK+++ CC+G+CV +++++HCG CN+ C GE+CV+GLCNYA
Sbjct: 67 CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.387e-20 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 0
Query: 77 CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
CC KC+++ TD +NCG C KCK+ + CC+G+CV +++++HCG CN+RC GE+CV+GLCNYA
Sbjct: 99 CCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.345e-18 Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = 0
Query: 7 VFVSVLAIVLALSISAASDERKDDVNDA---------TIESSDYSSAQGRWLL----QTKRTRRVTCKKFP---GICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
+ + L I + S S +DE D +D +I S+ S++ R L+ + K+ R + + G+ KG+ CCKK C N+L DR NCG+CG KC + + CC G C +FN HCG C +C +G C +G C YA
Sbjct: 18 LILYFLIIATSKSNSVLADEVVDQEDDPEYYILDETPSILSNVTISSKTRLLVSHYKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.945e-13 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVL-ALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQ--CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
M KL +++ +L +L + + + + ++S ++ W R + CK P IC G + CC+ +CV++L+D +C C K C++ CC G CVD + + +CG C N C +G C FG+C YA
Sbjct: 1 MMSIKLTLCALIFFLLNSLLHHVLGHDNQLNTTSSWLKSHIKAATTTNW----GRPKPPMCK--PWICKRSGPSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGYA 138
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.009e-9 Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 0
Query: 77 CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
C CV++ T+R NCG CG C CC G CVD + +CG C+N C G+ C FG C+YA
Sbjct: 82 CFNYSCVDVSTNRFNCGSCGLVCNLGTRCCGGICVDIQKDNGNCGKCSNVCSPGQKCSFGFCDYA 146
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Match: STIG1_SOLLC (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 3.263e-9 Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 0
Query: 82 CVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLC 138
CV++ T+R NCG CG C CC G CVD + +CG CNN C G+ C FGLC
Sbjct: 84 CVDLFTNRFNCGSCGLVCIVGTRCCGGICVDIKKDNGNCGKCNNVCSPGQNCSFGLC 140
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1U8KP32_GOSHI (stigma-specific STIG1-like protein 1 OS=Gossypium hirsutum OX=3635 GN=LOC107917702 PE=4 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 5.952e-98 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A0D2M8K0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G091800 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 3.061e-96 Identity = 138/141 (97.87%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASD+RKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCV+PSFN+KHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDDRKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVNPSFNKKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1U8L1L1_GOSHI (stigma-specific STIG1-like protein 1 OS=Gossypium hirsutum OX=3635 GN=LOC107921963 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 3.061e-96 Identity = 138/141 (97.87%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKFRKLVFVSVLAIVLALSISAASD+RKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCV+PSFN+KHCGGCNNRCGNGEYCVFGLCNYA
Sbjct: 1 MKFRKLVFVSVLAIVLALSISAASDDRKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVNPSFNKKHCGGCNNRCGNGEYCVFGLCNYA 141
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1U8KHX5_GOSHI (stigma-specific STIG1-like protein 1 OS=Gossypium hirsutum OX=3635 GN=LOC107917297 PE=4 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.830e-72 Identity = 119/145 (82.07%), Postives = 127/145 (87.59%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAAS--DERKD--DVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL+FVSVL +VL L SAAS D ++D D NDA ++SS Y SAQGRWLLQ KRTRRVTCKKFP ICDAKGSPGPQCCKKKCVNILTDR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE+CVFGLCNYA
Sbjct: 1 MKFTKLIFVSVLIVVLVLCTSAASNLDHQQDTTDFNDAIMDSSKYYSAQGRWLLQNKRTRRVTCKKFPRICDAKGSPGPQCCKKKCVNILTDRHNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGEFCVFGLCNYA 145
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A0D2QA02_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G091700 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.111e-72 Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAAS--DERKD--DVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KLVFVSVL +V+ LS SAAS D ++D D NDA ++SS+YSSAQGRWLLQ KRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE+CVFGLCNYA
Sbjct: 1 MKFTKLVFVSVLIVVIVLSTSAASNLDHQQDTTDFNDAIMDSSEYSSAQGRWLLQNKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRHNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGEFCVFGLCNYA 145
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1U8KXS9_GOSHI (stigma-specific STIG1-like protein 1 OS=Gossypium hirsutum OX=3635 GN=LOC107921962 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.111e-72 Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAAS--DERKD--DVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KLVFVSVL +V+ LS SAAS D ++D D NDA ++SS+YSSAQGRWLLQ KRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE+CVFGLCNYA
Sbjct: 1 MKFTKLVFVSVLIVVIVLSTSAASNLDHQQDTTDFNDAIMDSSEYSSAQGRWLLQNKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRHNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGEFCVFGLCNYA 145
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A061F5G7_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_030830 PE=4 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.170e-65 Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISA-ASDERKDDVNDATIESSDYSSAQ-----------GRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MKF KL+F S+L +VL LSI+A AS +++DD ++ + D + A+ GR LLQ KRTRR+ C KFP IC A+GSPGPQCCKKKCVNIL DR NCGKCGKKCKYNEICCKGKCV+PSFNRKHCGGCNNRC NGE CVFGLCNYA
Sbjct: 1 MKFIKLLFASILVMVLVLSIAATASLDQQDDTDNKSAAEEDDNDAETKQRFMLDETEGRSLLQKKRTRRLNCNKFPRICHARGSPGPQCCKKKCVNILMDRLNCGKCGKKCKYNEICCKGKCVNPSFNRKHCGGCNNRCSNGELCVFGLCNYA 153
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1R3IGG0_9ROSI (Stigma-specific protein Stig1 OS=Corchorus olitorius OX=93759 GN=COLO4_23506 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.258e-59 Identity = 99/163 (60.74%), Postives = 116/163 (71.17%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAASD-----ERKDDV-----------NDATIES------SDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MK +L+FV VLA++L LSI+A + + DD NDA E+ SD +GR LLQ KRT+R+TC KFP IC AKGSPGPQCCKKKCVNIL DR NCGKCGKKCK++EICCKGKCV+PSFN+KHCGGCNN+C NG CVFGLC+YA
Sbjct: 1 MKLTRLIFVLVLAMILVLSIAATPNNLYQQDDDDDTGNYVAAEDQNDNDAMSETEQVSGLSDDIETEGRLLLQKKRTKRLTCNKFPKICRAKGSPGPQCCKKKCVNILIDRHNCGKCGKKCKFSEICCKGKCVNPSFNKKHCGGCNNKCSNGGSCVFGLCDYA 163
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A1R3GQA7_COCAP (Stigma-specific protein Stig1 OS=Corchorus capsularis OX=210143 GN=CCACVL1_24256 PE=4 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.444e-55 Identity = 88/123 (71.54%), Postives = 99/123 (80.49%), Query Frame = 0
Query: 22 AASDERKDDVNDATIESSDYS---SAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
AA D+ +D T + SD S +GR LLQ KRT+R+TC KFP IC AKGSPGPQCCKKKCVNIL DRQNCGKCGKKCK++EICCKGKCV+PSFNRKHCGGCNN+C NG CVFGLC+YA
Sbjct: 28 AAEDQNDNDATSETEQVSDLSDDIETEGRLLLQKKRTKRLTCNKFPKICRAKGSPGPQCCKKKCVNILIDRQNCGKCGKKCKFSEICCKGKCVNPSFNRKHCGGCNNKCNNGGSCVFGLCDYA 150
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Match: A0A067L512_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00921 PE=4 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.027e-53 Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVLALSISAA----SDERKDDVNDATIESSDYSSAQGRWLLQTKR-TRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
MK + + VL + L LSI+A ++ DD++ E+S++ GR L Q KR RR+TC K+P IC +KGSPGP CCKKKCVN+L DR NCG CGKKCKYN+ICCKGKCV+PSFNR+HCGGCNNRC NG +C FGLCNYA
Sbjct: 1 MKLLTIFLILVLVMALILSITATPLQEQEQEHDDMDYELKENSEHGF--GRLLAQKKRKARRITCNKYPRICHSKGSPGPFCCKKKCVNVLNDRLNCGACGKKCKYNQICCKGKCVNPSFNRRHCGGCNNRCKNGGFCAFGLCNYA 144
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT1G11925.1 (| Symbols: | Stigma-specific Stig1 family protein | chr1:4026195-4026617 REVERSE LENGTH=140) HSP 1 Score: 114.39 bits (285), Expect = 1.813e-33 Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 0
Query: 3 FRKLVFVSVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
F+ F+ VL +VLA++I+ + + + +SA+ + T +TC K +C KGSPG CC+KKCV++ T++ NCG+CGK C+Y+E+CC G CV+P F+R+HCGGC +C G C +G+C+YA
Sbjct: 4 FKISYFIMVLIMVLAIAITFSEPLTVEAKHQHKYGWGIAASARNKGRKHLGAT--LTCDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFKKCKKGRSCAYGMCSYA 140
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT1G50720.1 (| Symbols: | Stigma-specific Stig1 family protein | chr1:18789180-18789644 REVERSE LENGTH=154) HSP 1 Score: 93.5893 bits (231), Expect = 3.844e-25 Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 10 SVLAIVLALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVT---------------CKKFPGICDAKG--SPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
+VL I+L +SI+ V++ E+ + Q + L+ T R R C K IC ++G + CC KCV++ D NCG C +CK+ + CC+G+CV +++++HCG CN+ C GE+CV+GLCNYA
Sbjct: 6 TVLTILLTISIAIMVLIATVFVSNNKTETLLQTHTQTQTLITTGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT4G26880.1 (| Symbols: | Stigma-specific Stig1 family protein | chr4:13508265-13508723 REVERSE LENGTH=152) HSP 1 Score: 84.3445 bits (207), Expect = 1.501e-21 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 60 CKKFPGICDAKGSPGPQ----CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
C + P IC G G CC KC+++ +D NCG C KCK+++ CC+G+CV +++++HCG CN+ C GE+CV+GLCNYA
Sbjct: 67 CNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT5G55110.1 (| Symbols: | Stigma-specific Stig1 family protein | chr5:22367870-22368361 FORWARD LENGTH=163) HSP 1 Score: 83.9593 bits (206), Expect = 2.454e-21 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 0
Query: 77 CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
CC KC+++ TD +NCG C KCK+ + CC+G+CV +++++HCG CN+RC GE+CV+GLCNYA
Sbjct: 99 CCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT1G53130.1 (| Symbols: GRI | Stigma-specific Stig1 family protein | chr1:19794947-19795453 REVERSE LENGTH=168) HSP 1 Score: 78.9518 bits (193), Expect = 3.149e-19 Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = 0
Query: 7 VFVSVLAIVLALSISAASDERKDDVNDA---------TIESSDYSSAQGRWLL----QTKRTRRVTCKKFP---GICDAKGSPGPQCCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
+ + L I + S S +DE D +D +I S+ S++ R L+ + K+ R + + G+ KG+ CCKK C N+L DR NCG+CG KC + + CC G C +FN HCG C +C +G C +G C YA
Sbjct: 18 LILYFLIIATSKSNSVLADEVVDQEDDPEYYILDETPSILSNVTISSKTRLLVSHYKKIKKGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168
BLAST of Ghir_A01G007360.1 vs. TAIR10
Match: AT1G50650.1 (| Symbols: | Stigma-specific Stig1 family protein | chr1:18763773-18764297 REVERSE LENGTH=174) HSP 1 Score: 66.2402 bits (160), Expect = 2.134e-14 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 1 MKFRKLVFVSVLAIVL-ALSISAASDERKDDVNDATIESSDYSSAQGRWLLQTKRTRRVTCKKFPGICDAKGSPGPQ--CCKKKCVNILTDRQNCGKCGKKCKYNEICCKGKCVDPSFNRKHCGGCNNRCGNGEYCVFGLCNYA 141
M KL +++ +L +L + + + + ++S ++ W R + CK P IC G + CC+ +CV++L+D +C C K C++ CC G CVD + + +CG C N C +G C FG+C YA
Sbjct: 1 MMSIKLTLCALIFFLLNSLLHHVLGHDNQLNTTSSWLKSHIKAATTTNW----GRPKPPMCK--PWICKRSGPSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGYA 138 The following BLAST results are available for this feature:
BLAST of Ghir_A01G007360.1 vs. NCBI nr
Analysis Date: 2018-11-20 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of Ghir_A01G007360.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 7
BLAST of Ghir_A01G007360.1 vs. ExPASy TrEMBL
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Ghir_A01G007360.1 vs. TAIR10
Analysis Date: 2018-12-03 (BLASTP of HAU v1.0 Gossypium hirsutum proteins vs arabidopsis TAIR10) Total hits: 6
InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium hirsutum proteins
Date Performed: 2018-11-09
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ghir_A01G007360.1_HAU-AD1_v1.0 ID=Ghir_A01G007360.1_HAU-AD1_v1.0; Name=Ghir_A01G007360.1; organism=Gossypium hirsutum; type=mRNA; length=426bpback to top protein sequence of Ghir_A01G007360.1_HAU-AD1_v1.0 >Ghir_A01G007360.1_HAU-AD1_v1.0 ID=Ghir_A01G007360.1_HAU-AD1_v1.0; Name=Ghir_A01G007360.1_HAU-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=141bpback to top mRNA from alignment at Ghir_A01:12372172..12372597- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below.>Ghir_A01G007360.1_HAU-AD1_v1.0 ID=Ghir_A01G007360.1_HAU-AD1_v1.0; Name=Ghir_A01G007360.1; organism=Gossypium hirsutum; type=mRNA; length=426bp; location=Sequence derived from: Ghir_A01:12372172..12372597- (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at Ghir_A01:12372172..12372597- >Ghir_A01G007360.1_HAU-AD1_v1.0 ID=Ghir_A01G007360.1_HAU-AD1_v1.0; Name=Ghir_A01G007360.1; organism=Gossypium hirsutum; type=CDS; length=426bp; location=Sequence derived from: Ghir_A01:12372172..12372597- (Gossypium hirsutumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|