HAU1129, HAU1129 (genetic_marker) gossypium spp | Cottongen

Marker Overview

Marker Overview


Name	HAU1129
Alias	TA27503_3635
Genbank ID	N/A
Type	SSR
Species	Gossypium spp.
Source Type	EST
Repeat Motif	(AT)9
PCR Condition	Annealing temperature: 57.1
Primer 1	HAU1129_F: TTGGAGGTGTCAGATCCTCT
Primer 2	HAU1129_R: AAGATCCATGACCCAGAAAA
Product Length	182
Publication	[view all]
Comment	Primer data obtained in 2012

Publications


Year	Publication
2011	Yu Y, Yuan D, Liang S, Li X, Wang X, Lin Z, Zhang X. Genome structure of cotton revealed by a genome-wide SSR genetic map constructed from a BC1 population between gossypium hirsutum and G. barbadense. BMC genomics. 2011; 12:15

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Emian-22 x 3-79, BC1 (2011)	AD_ch16_Dt.07	N/A	99.82	HAU1129	View
2	Yumian-1 x T586, RIL (2015)	AD_ch16_Dt.07	N/A	16.5	HAU1129	View
3	GX1135 x GX100-2, RIL (2016)	AD_ch16_Dt.07	N/A	106.4	HAU1129	View
4	GX1135 x VGX100-2, RIL (2016)	AD_ch16_Dt.07	N/A	39.1	HAU1129	View
5	MGG-293-793, MAGIC (2018)	AD_ch16_Dt.07	N/A	55.5	HAU1129	View
6	TM-1 x Hai-7124, BC1 (2012)	AD_ch16_Dt.07	N/A	103.1	HAU1129-350	View