TMB2844, TMB2844 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB2844
Genbank IDBV679790
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679790.1
Source Typegenomic
Repeat Motif(GT)30
PCR ConditionAnnealing temperature: 55
Primer 1TMB2844_F: TTGTTGCATTCATACGCATCT
Primer 2TMB2844_R: TCTACTTGGGGATGGGTGAG
Product Length235
PolymorphismP_ TMB2844
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679790
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679790.1BV679790.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch07_At.07N/A61.41TMB2844View
2AD-genome wide Reference Map (2009)AD_ch07_At.07N/A66TMB2844View
3TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A87.61TMB2844View
4TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A50.8TMB2844View
5CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch07_At.07N/A79.7TMB2844View
6CCRI-35 x Yumian-1, RIL (2015)AD_ch07_At.07N/A35.4TMB2844View
7CCRI-35 x Yumian-1, RIL (2017)AD_ch07_At.07N/A65.01TMB2844View
8TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A50.81TMB2844View
Sequence
>TMB2844 ID=TMB2844; Name=TMB2844; organism=Gossypium hirsutum; type=genetic_marker; length=235bp
TTGTTGCATTCATACGCATCTGATTAAATGCCTGAATATGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT
TGACTATGCGAGTACTGAGGTATCGATGATATGGCAATATTGAAATAACT
GTTGTCGTGTTACTCTATTTTCTGCCTTTTATTATATGTTTTGGACTCAC
ACTGAGCTTGTGTAGCTCACCCATCCCCAAGTAGA