TMB0142, TMB0142 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB0142
AliasTMF21
Genbank IDBV679296
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679296.1
Source Typegenomic
Repeat Motif(TA)5++(CA)6
PCR ConditionAnnealing temperature: 55
Primer 1TMB0142_F: TTAAGGCGGGAAACAATGTC
Primer 2TMB0142_R: TTGTGACGTCAACACGAACC
Product Length209
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679296
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679296.1BV679296.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch01_At.01N/A22.25TMB0142View
2AD-genome wide Reference Map (2009)AD_ch01_At.01N/A34TMB0142View
3TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A59.25TMB0142View
4Yumian-1 x 7235, RIL (2015)AD_ch01_At.01N/A54.3TMB0142View
5TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A85.1TMB0142View
6TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A85.13TMB0142View
Sequence
>TMB0142 ID=TMB0142; Name=TMB0142; organism=Gossypium hirsutum; type=genetic_marker; length=209bp
TTAAGGCGGGAAACAATGTCTATATATATATGTATAGTTTGTGTGTGTGT
GGTGTGAGTTATAAAAAAAAAAACTAGCAGCAGCTAGAATAGAGAGAAAA
AAAAGTTTGTATTGTGTTTATTTGTGTGCAATAAAAAAATAGTATTTAAT
TTATTTTTATTACGCTTCCAACAAGTGGTATCAGAACTAGGTTCGTGTTG
ACGTCACAA