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Marker Overview
Name | TMB0062 |
Alias | TMD03
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Genbank ID | BV679270 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | TM-1 |
Source Sequence | BV679270.1
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Source Type | genomic |
Repeat Motif | (CA)10 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | TMB0062_F: GCATTGAAGGAAAAAGAAGAACC |
Primer 2 | TMB0062_R: ATGCCTTGTTTGCTTGAAGT |
Product Length | 250 |
Contact | Yu, John Z. (Zhi-Hong)
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Comment | Primer data obtained in 2005-10 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 89 | TMB0062 | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch01_At.01 | N/A | 52.59 | TMB0062 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch01_At.01 | N/A | 29.69 | TMB0062 | View |
4 | TM-1 x 3-79, RIL (2014) | AD_ch01_At.01 | N/A | 91.8 | TMB0062 | View |
5 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch01_At.01 | N/A | 93.2 | TMB0062 | View |
6 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A01 | N/A | 78 | TMD03-a | View |
7 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A02 | N/A | 120.8 | TMD03-b | View |
8 | TM-1 x Hai-7124, BC1 (2007) | AD_ch01_At.01 | N/A | 63.9 | TMD03-275 | View |
9 | TM-1 x Hai-7124, BC1 (2008) | AD_ch01_At.01 | N/A | 66.37 | TMD03-275 | View |
10 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch01_At.01 | N/A | 93.2 | TMD03-275 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch01_At.01 | N/A | 67.4 | TMD03-275 | View |
12 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch01_At.01 | N/A | 35.6 | TMHD03 | View |
13 | TM-1 x 3-79, RIL (2012.v3) | AD_ch01_At.01 | N/A | 91.79 | TMB0062 | View |
Sequence
>TMB0062 ID=TMB0062; Name=TMB0062; organism=Gossypium hirsutum; type=genetic_marker; length=250bp GCATTGAAGGAAAAAGAAGAACCTTCTTCAAAACCCTACACACACACACA CACACACATGTCTCATTCTACTTAGTGGAACTTAACAAGTGTTACAACTT CAGAATTTGTCCTTCTTAATTACCTACATTTTTTGAGAGAAACATAAATG AGAATCCTGCATTATAAATATCAGACTAGTCTATCTAGTTGACTCCTAAC CATGTTACTTTACAACCTAACTAGTACAGTACTTCAAGCAAACAAGGCAT
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