NAU4907, NAU4907 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU4907
Genbank IDDT546635
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
TM-1
Source SequenceDT546635.1
Source TypeEST
Repeat Motif(ccg)6
PCR ConditionAnnealing temperature: 57
Primer 1NAU4907_F: TTGGGTTGGGTTGATTTAGT
Primer 2NAU4907_R: ATCTCAGCTGCGAATCTACC
Restriction EnzymeEcoRI; NotI
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT546635
Germplasm
Stock NameType
TM-1accession
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DT546635.1DT546635.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch19_Dt.05N/A32.1NAU4907View
2Emian-22 x 3-79, BC1 (2011)AD_ch19_Dt.05N/A0NAU4907View
3AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A332NAU4907View
4DH962 X Ji Mian 5, F2 (2015)AD_ch19_Dt.05N/A169.31NAU4907View
5DH962 x Ji Mian 5, RIL (2015)AD_ch19_Dt.05N/A6.4NAU4907View
6TM-1 x Hai-7124, BC1 (2007)AD_ch19_Dt.05N/A177.4NAU4907-370View
7TM-1 x Hai-7124, BC1 (2008)AD_ch19_Dt.05N/A176.48NAU4907-370View
8TM-1 x Hai-7124, BC1 (2012)AD_ch19_Dt.05N/A15.1NAU4907-370View
Sequence
>NAU4907 ID=NAU4907; Name=NAU4907; organism=Gossypium hirsutum; type=genetic_marker; length=292bp
TTGGGTTGGGTTGATTTAGTCAGTTTACTTCCTTTTTTATCTATAATCTT
TTTTTCATCATCAATCCCCTTTGTATTTCTATAACAATTATTACCATTTA
TTTAACATTTTGAGCTTATACACTTTGATTTTGGATAACCCTTTTGTGAG
ATTCGAAAAAAAATCCCATTTTTTTTACTTATTTTCCGATGAGAGGGAGG
GGTCCCGCCGCCGCCGCCGCCGTCCCCGATGGAGAAGAACCCAAATACAG
AGGTGTTCGAAAAAGACCATGGGGTAGATTCGCAGCTGAGAT