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Marker Overview
| Name | NAU3592 |
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| Genbank ID | CO112840 |
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| Type | SSR |
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| Species | Gossypium raimondii |
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| Source Type | EST |
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| Repeat Motif | (at)8 |
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| PCR Condition | Annealing temperature: 57 |
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| Primer 1 | NAU3592_F: CATCTTCAATTTCACCCACA |
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| Primer 2 | NAU3592_R: TGAAAGGCAACTCCACAATA |
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| Restriction Enzyme | NotI; EcoRV |
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| Publication | [view all] |
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| Contact | Zhang, Tian-Zhen
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| Comment | Primer data obtained in 2007-05 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch19_Dt.05 | N/A | 9.4 | NAU3592 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch04_At.04 | N/A | 119.27 | NAU3592 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 317 | NAU3592 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch04_At.04 | N/A | 152 | NAU3592 | View |
| 5 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_chU | N/A | 20.3 | NAU3592 | View |
| 6 | Yumian-1 x 7235, RIL (2015) | AD_ch19_Dt.05 | N/A | 102.9 | NAU3592 | View |
| 7 | DH962 X Ji Mian 5, F2 (2015) | AD_ch04_At.04 | N/A | 71.34 | NAU3592 | View |
| 8 | W10 x TM-1, F2:3 (2015) | AD_ch04_At.04 | N/A | 15.8 | NAU3592 | View |
| 9 | DH962 x Ji Mian 5, RIL (2015) | AD_ch04_At.04 | N/A | 72.9 | NAU3592 | View |
| 10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch04_At.04 | N/A | 23.1 | NAU3592 | View |
| 11 | TM-1 x Hai-7124, BC1 (2007) | AD_ch04_At.04 | N/A | 13.1 | NAU3592-190 | View |
| 12 | TM-1 x Hai-7124, BC1 (2008) | AD_ch04_At.04 | N/A | 13.69 | NAU3592-190 | View |
| 13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch04_At.04 | N/A | 115.8 | NAU3592-190 | View |
Sequence
>NAU3592 ID=NAU3592; Name=NAU3592; organism=Gossypium raimondii; type=genetic_marker; length=157bp
CATCTTCAATTTCACCCACAATCATGAAAAAGGGAGAAATATCCGTCAAA
AAGTGTAATGAAAAAAAGCCACTAATTTTGTGGATATATATATATATATA
AAAGAAGCAAAAGCTTTATGGCTTAACTAATGGCACTTATTGTGGAGTTG
CCTTTCA
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