MUSB1076, MUSB1076 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1076
Genbank IDDX541653
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX541653.2
Source TypeEST
Repeat Motif(TAAA)8
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1076_F: GGTTGGACTTGTGTAGCAATCTCC
Primer 2MUSB1076_R: AGGATCAGTCTGTTAAGCTTTGGGT
Product Length290
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1076
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX541653
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX541653.2DX541653.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch11_At.11N/A14.61MUSB1076View
2AD-genome wide Reference Map (2009)AD_ch11_At.11N/A7MUSB1076View
3Yumian-1 x T586, RIL (2006)AD_ch08_At.08N/A7.5MUSB1076View
4Yumian-1 x T586, RIL (2015)AD_ch11_At.11N/A116.3MUSB1076View
5CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch11_At.11N/A219.5MUSB1076View
6Yumian-1 x T586, RIL (2009)AD_ch11_At.11N/A29.7MUSB1076/290tView
Sequence
>MUSB1076 ID=MUSB1076; Name=MUSB1076; organism=Gossypium hirsutum; type=genetic_marker; length=290bp
GGTTGGACTTGTGTAGCAATCTCCCTCCATCTATGAGCATATTACCTGAA
ATTTTCATTTGACTTCTTTTCCATATTCTGTAATGTGATCCTATCAGACG
CTATGTCAGTCATGTAGTAGCCCAAATTTGACCGGGCTGTAAACTAAATA
AATAAATAAATAAATAAATAAATAAATATGCATTTATTAAACAGTCCAAG
TCCATGTTACAAAACCCAAAAATAAAAAAATAAAAAAATGTTTATTTACA
GGCCCAACCACATTAACCCAAAGCTTAACAGACTGATCCT