MUSB0369, MUSB0369 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0369
Genbank IDDX822697
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822697
Source TypeEST
Repeat Motif(CCT)4
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0369_F: GACCGTCCACACCTACCATC
Primer 2MUSB0369_R: GGGAGAAAGAGGGAGAAGAGG
Product Length450
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0369
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822697
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822697DX822697Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch11_At.11N/A83musb0369View
2TM-1 x 3-79, RIL (2006)AD_ch11_At.11N/A72.2musb0369View
3TM-1 x 3-79, RIL (2012)AD_ch11_At.11N/A103.53MUSB0369bView
4TM-1 x 3-79, RIL (2014)AD_ch11_At.11N/A111.9MUSB0369bView
5TM-1 x 3-79, RIL (2012.v3)AD_ch11_At.11N/A111.94MUSB0369bView
Sequence
>MUSB0369 ID=MUSB0369; Name=MUSB0369; organism=Gossypium hirsutum; type=genetic_marker; length=450bp
GACCGTCCACACCTACCATCCTTCCTCGCTCTCCCCCACTCCCCACGCCC
AGTTTTTTTTTTTTTCCCCCACACCACCCCCCCCTCTTCTTTTCTACCTA
ACCACCCCCCCCCTCCTCCTTCATTCCCCCATCCCCCCTTCCCTTCCCTC
CCTCTCCTTAACCCCCCCACTCTCCTCCTCTCTCAAACCCCCTCCCCCTC
CCTCCTCCTCCTCTCACCTCCTCCTTGCCCCCACCCCCATCCCCCTCCCT
CTTACTCCTCTCCTCCTTCCCCTCCCCCCTCCCCCCCTTACCCTCCCTCC
CCCCTCCCCCCCTCCCCTCTCCACCCCCTTCCCCCCCCCTCTCCCCACCC
TCCCTTCCCCCTTTCTCCCCCCCTCCCATCTCCCCCCCTCCCATCTCACC
CCTCCCTCACACTTCCCTCCTCTCCCCCCCCTCTTCTCCCTCTTTCTCCC