CIR0292, CIR0292 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0292
AliasCIR292
Genbank IDAJ567236
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567236
Source Typegenomic
Repeat Motif(CA)6(GA)6(N)out(GA)7
PCR ConditionAnnealing temperature: 55
Primer 1CIR292_F: CTTCTTCTTCGTCTTCGT
Primer 2CIR292_R: TCAGCCGCACATTAG
Product Length144
PolymorphismP_ CIR0292
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567236
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567236AJ567236Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch14_Dt.02N/A191.2CIR292aView
2CCRI-36 x Hai-7124, F2 (2007)AD_ch14_Dt.02N/A201CIR292bView
3Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch14_Dt.02N/A179.7CIR292View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch14_Dt.02N/A124.97CIR292View
5TM-1 x 3-79, RIL (2012)AD_ch14_Dt.02N/A13.38CIR292View
6TM-1 x 3-79, RIL (2014)AD_ch14_Dt.02N/A113CIR292View
7CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch14_Dt.02N/A143.2CIR292View
8AD-genome wide Reference Map (2009)AD_ch14_Dt.02N/A203cir0292View
9TM-1 x 3-79, RIL (2012.v3)AD_ch14_Dt.02N/A113.04CIR292View
10PD 94042 x (AD)4-08, F2 (2016)AD_ch14_Dt.02N/A14.3CIR292View
Sequence
>CIR0292 ID=CIR0292; Name=CIR0292; organism=Gossypium hirsutum; type=genetic_marker; length=144bp
CTTCTTCTTCGTCTTCGTTGATTTTTTCTTTCTAAATTCTAAATTCCCAA
CATTTCACTTCACTGCTACAAACAGGAGAGAGAGAGAGAGGGAGACCCAG
TTGTGTTTTTTTTAGTTCTAGCTGTTTACCTAATGTGCGGCTGA