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Marker Overview
Name | BNL3993 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3993_orig
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Source Type | genomic |
Repeat Motif | (TC)16, (TC)15 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3993_F: TGTTTGTTTCCCTCACTCCC |
Primer 2 | BNL3993_R: TCCAAAGAGACGTCAATCCA |
Polymorphism | P_ BNL3993 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Acala-44 x Pima S-7, F2 (2004) | AD_chU | N/A | 26.9 | BNL3993 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch20_Dt.10 | N/A | 48.5 | BNL3993 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch20_Dt.10 | N/A | 70.03 | BNL3993 | View |
4 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch20_Dt.10 | N/A | 158.3 | BNL3993 | View |
5 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch10_At.10 | N/A | 172.8 | BNL3993 | View |
6 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch20_Dt.10 | N/A | 93.92 | BNL3993 | View |
7 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch20_Dt.10 | N/A | 172.1 | BNL3993 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch10_At.10 | N/A | 233 | BNL3993 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 145 | BNL3993 | View |
10 | AD-genome wide Reference Map (2009) | AD_ch20_Dt.10 | N/A | 104 | BNL3993 | View |
11 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 71.6 | BNL3993-135 | View |
12 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 71.45 | BNL3993-135 | View |
13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 66.2 | BNL3993-135 | View |
14 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch20_Dt.10 | N/A | 103.6 | BNL3993 | View |
Sequence
>BNL3993 ID=BNL3993; Name=BNL3993; organism=Gossypium hirsutum; type=genetic_marker; length=204bp TGTTTGTTTCCCTCACTCCCCCTCTCACGTTGGACCCTTTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCCAAAATTCTAGATTTTGATTCTTTTGGCT TATACGTTCTCTCTTTTCCAATGTCTTTTATTTTTTATTTTTTATTTTTC AATATTTTCTCTCTTTTTTGTTTCAACATCATTGTGGATTGACGTCTCTT TGGA
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