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Marker Overview
| Name | BNL3569 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3569_orig
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| Source Type | genomic |
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| Repeat Motif | (CA)21 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3569_F: GCCAATCACCGAGAACAATT |
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| Primer 2 | BNL3569_R: CGCTTATTGCCTTGATTGGT |
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| Polymorphism | P_ BNL3569 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch19_Dt.05 | N/A | 145.67 | BNL3569 | View |
| 2 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch05_At.05 | N/A | 21.9 | BNL3569 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 60 | BNL3569 | View |
| 4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch19_Dt.05 | N/A | 264.9 | BNL3569 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 146 | BNL3569 | View |
| 6 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch05_At.05 | N/A | 81 | BNL3569 | View |
| 7 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch05_At.05 | N/A | 65 | BNL3569-152 | View |
| 8 | TM-1 x 3-79, RIL (2012) | AD_ch05_At.05 | N/A | 62.01 | BNL3569a | View |
| 9 | TM-1 x 3-79, RIL (2014) | AD_ch05_At.05 | N/A | 141.2 | BNL3569a | View |
| 10 | Monsanto SSR Bin Map, (2009) | AD_ch05_At.05 | N/A | 141 | BNL3569a | View |
| 11 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 68.97 | BNL3569b | View |
| 12 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 117.3 | BNL3569b | View |
| 13 | Monsanto SSR Bin Map, (2009) | AD_ch19_Dt.05 | N/A | 181 | BNL3569b | View |
| 14 | TM-1 x 3-79, RIL (2012.v3) | AD_ch05_At.05 | N/A | 141.24 | BNL3569a | View |
| 15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 117.31 | BNL3569b | View |
| 16 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch19_Dt.05 | N/A | 95.9 | BNL3569 | View |
Sequence
>BNL3569 ID=BNL3569; Name=BNL3569; organism=Gossypium hirsutum; type=genetic_marker; length=169bp
GCCAATCACCGAGAACAATTAAAAGCCAAGCATAAAAGACAGTTCCTACT
AGACATCTAATTTAGCTAATGAATCAGCGAAACCATTAACTTCCTTGTAA
ATATTCACACACACACACACACACACACACACACACACACACACACACTA
CCAATCAAGGCAATAAGCG
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