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Marker Overview
| Name | BNL3482 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3482_orig
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| Source Type | genomic |
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| Repeat Motif | (AC)12 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3482_F: ATTTGCCCCAGGTTTTTTTT |
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| Primer 2 | BNL3482_R: GCAACACCTTTTCCTCCCTA |
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| Polymorphism | P_ BNL3482 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch26_Dt.12 | N/A | 74.4 | BNL3482 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch26_Dt.12 | N/A | 46.64 | BNL3482 | View |
| 3 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch20_Dt.10 | N/A | 9.44 | BNL3482 | View |
| 4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch26_Dt.12 | N/A | 33.83 | BNL3482 | View |
| 5 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch26_Dt.12 | N/A | 30.3 | BNL3482 | View |
| 6 | Palmeri x K-101, F2 (2007) | AD_ch20_Dt.10 | N/A | 22.3 | BNL3482 | View |
| 7 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch26_Dt.12 | N/A | 74.4 | BNL3482 | View |
| 8 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch20_Dt.10 | N/A | 28 | BNL3482 | View |
| 9 | AD-genome wide Reference Map (2009) | AD_ch20_Dt.10 | N/A | 175 | BNL3482 | View |
| 10 | AD-genome wide Reference Map (2009) | AD_ch26_Dt.12 | N/A | 123 | BNL3482 | View |
| 11 | GX1135 x VGX100-2, RIL (2016) | AD_ch23_Dt.09 | N/A | 74.6 | BNL3482 | View |
| 12 | Monsanto SSR Bin Map, (2009) | AD_ch26_Dt.12 | N/A | 41 | BNL3482 | View |
| 13 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch26_Dt.12 | N/A | 82.6 | BNL3482a | View |
| 14 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch26_Dt.12 | N/A | 26 | BNL3482-138 | View |
| 15 | TM-1 x Hai-7124, BC1 (2008) | AD_ch26_Dt.12 | N/A | 72.16 | BNL3482-145 | View |
| 16 | TM-1 x Hai-7124, BC1 (2007) | AD_ch26_Dt.12 | N/A | 72.5 | BNL3482-145 | View |
| 17 | TM-1 x Hai-7124, BC1 (2005.v0) | AD_ch26_Dt.12 | N/A | 84 | BNL3482-145 | View |
| 18 | TM-1 x Hai-7124, BC1 (2012) | AD_ch26_Dt.12 | N/A | 75.4 | BNL3482-145 | View |
| 19 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch26_Dt.12 | N/A | 50 | BNL3482- | View |
| 20 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch26_Dt.12 | N/A | 115.4 | BNL3482 | View |
Sequence
>BNL3482 ID=BNL3482; Name=BNL3482; organism=Gossypium hirsutum; type=genetic_marker; length=140bp
ATTTGCCCCAGGTTTTTTTTTAATATATGGTTTACATTTTTCTTACATAA
TGTAAAAAAAAAAAAACCCAACACACACACACACACACACACACAATATT
CAATCGGAGTAAGGAGAAAATAGGGAGGAAAAGGTGTTGC
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