|
Marker Overview
Name | BNL2571 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2571_orig
|
Source Type | genomic |
Repeat Motif | (AG)13, (TC)13 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2571_F: TCGCTATCGCTCTGAAATCA |
Primer 2 | BNL2571_R: ATGCCACGGAATTAGCAAAC |
Polymorphism | P_ BNL2571 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch13_At.13 | N/A | 45 | BNL2571a | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch13_At.13 | N/A | 53.6 | BNL2571a | View |
3 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch13_At.13 | N/A | 14.4 | BNL2571a | View |
4 | Palmeri x K-101, F2 (2007) | AD_ch13_At.13 | N/A | 51.5 | BNL2571a | View |
5 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch18_Dt.13 | N/A | 67.3 | BNL2571b | View |
6 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch18_Dt.13 | N/A | 25.7 | BNL2571b | View |
7 | Palmeri x K-101, F2 (2007) | AD_ch18_Dt.13 | N/A | 31.3 | BNL2571b | View |
8 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch18_Dt.13 | N/A | 6 | BNL2571b | View |
9 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch13_At.13 | N/A | 31.8 | BNL2571 | View |
10 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch18_Dt.13 | N/A | 23.69 | BNL2571 | View |
11 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch18_Dt.13 | N/A | 15.54 | BNL2571 | View |
12 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 72 | BNL2571 | View |
13 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch13_At.13 | N/A | 178 | BNL2571 | View |
14 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 38 | BNL2571 | View |
15 | H18 x 3-79, F2 (2005) | AD_ch18_Dt.13 | N/A | 140.5 | BNL2571 | View |
16 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 157.1 | BNL2571 | View |
17 | SG 747 x Giza 75, BIL (2013) | AD_ch13_At.13 | N/A | 1.8 | BNL2571 | View |
18 | Monsanto SSR Bin Map, (2009) | AD_ch18_Dt.13 | N/A | 41 | BNL2571 | View |
19 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 32.04 | BNL2571-280 | View |
20 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 26.8 | BNL2571-280 | View |
21 | TM-1 x Hai-7124, BC1 (2005.v0) | AD_ch13_At.13 | N/A | 190.3 | BNL2571-280 | View |
22 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 114.7 | BNL2571-280 | View |
23 | TM-1 x Hai-7124, BC1 (2007) | AD_ch18_Dt.13 | N/A | 32 | BNL2571-260 | View |
24 | TM-1 x Hai-7124, BC1 (2008) | AD_ch18_Dt.13 | N/A | 34.64 | BNL2571-260 | View |
25 | TM-1 x Hai-7124, BC1 (2012) | AD_ch18_Dt.13 | N/A | 85.4 | BNL2571-260 | View |
26 | GB713 x Nem-X, F2 (2011) | AD_ch18_Dt.13 | N/A | 60.7 | BNL2571_230 | View |
27 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch18_Dt.13 | N/A | 0 | BNL2571_260 | View |
28 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch13_At.13 | N/A | 79.92 | BNL2571 | View |
Sequence
>BNL2571 ID=BNL2571; Name=BNL2571; organism=Gossypium hirsutum; type=genetic_marker; length=249bp TCGCTATCGCTCTGAAATCAATCAATGAAACAAATAAATATACCCAAAAA AAACTTGTTGAGAATGAAAATTTTCTCTTTTCTCTCTCTCTCTCTCTCTC TCTCTCTGTGTTTCTGGTGGGGTTTTTTTCGTTTTTTTTTTTTTNNNGGA TTGGTACCCAAAAGTAGGAATTTATGGGTCAGCCAGTGGTTTTGTCGGGG TTGGGGGGCATTGGCTTGCAAAGGATGTCGTTTGCTAATTCCGTGGCAT
|