BNL2571, BNL2571 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL2571
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL2571_orig
Source Typegenomic
Repeat Motif(AG)13, (TC)13
PCR ConditionAnnealing temperature: 55
Primer 1BNL2571_F: TCGCTATCGCTCTGAAATCA
Primer 2BNL2571_R: ATGCCACGGAATTAGCAAAC
PolymorphismP_ BNL2571
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL2571_origBNL2571_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch13_At.13N/A45BNL2571aView
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch13_At.13N/A53.6BNL2571aView
3Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch13_At.13N/A14.4BNL2571aView
4Palmeri x K-101, F2 (2007)AD_ch13_At.13N/A51.5BNL2571aView
5CCRI-36 x Hai-7124, F2 (2007)AD_ch18_Dt.13N/A67.3BNL2571bView
6Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch18_Dt.13N/A25.7BNL2571bView
7Palmeri x K-101, F2 (2007)AD_ch18_Dt.13N/A31.3BNL2571bView
8Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch18_Dt.13N/A6BNL2571bView
9Guazuncho-2 x VH8-4602, consensus (2009)AD_ch13_At.13N/A31.8BNL2571View
10Guazuncho-2 x VH8-4602, consensus (2009)AD_ch18_Dt.13N/A23.69BNL2571View
11Guazuncho-2 x VH8-4602, RIL (2009)AD_ch18_Dt.13N/A15.54BNL2571View
12AD-genome wide Reference Map (2009)AD_ch18_Dt.13N/A72BNL2571View
13Handan-208 x Pima-90, F2:3 (2007)AD_ch13_At.13N/A178BNL2571View
14AD-genome wide Reference Map (2009)AD_ch13_At.13N/A38BNL2571View
15H18 x 3-79, F2 (2005)AD_ch18_Dt.13N/A140.5BNL2571View
16H18 x TM-1, F2 (2005)AD_ch13_At.13N/A157.1BNL2571View
17SG 747 x Giza 75, BIL (2013)AD_ch13_At.13N/A1.8BNL2571View
18Monsanto SSR Bin Map, (2009)AD_ch18_Dt.13N/A41BNL2571View
19TM-1 x Hai-7124, BC1 (2008)AD_ch13_At.13N/A32.04BNL2571-280View
20TM-1 x Hai-7124, BC1 (2007)AD_ch13_At.13N/A26.8BNL2571-280View
21TM-1 x Hai-7124, BC1 (2005.v0)AD_ch13_At.13N/A190.3BNL2571-280View
22TM-1 x Hai-7124, BC1 (2012)AD_ch13_At.13N/A114.7BNL2571-280View
23TM-1 x Hai-7124, BC1 (2007)AD_ch18_Dt.13N/A32BNL2571-260View
24TM-1 x Hai-7124, BC1 (2008)AD_ch18_Dt.13N/A34.64BNL2571-260View
25TM-1 x Hai-7124, BC1 (2012)AD_ch18_Dt.13N/A85.4BNL2571-260View
26GB713 x Nem-X, F2 (2011)AD_ch18_Dt.13N/A60.7BNL2571_230View
27TM-1 x Hai-7124, BC1S1 (2007)AD_ch18_Dt.13N/A0BNL2571_260View
28CCRI-35 x Yumian-1, RIL (2017)AD_ch13_At.13N/A79.92BNL2571View
Sequence
>BNL2571 ID=BNL2571; Name=BNL2571; organism=Gossypium hirsutum; type=genetic_marker; length=249bp
TCGCTATCGCTCTGAAATCAATCAATGAAACAAATAAATATACCCAAAAA
AAACTTGTTGAGAATGAAAATTTTCTCTTTTCTCTCTCTCTCTCTCTCTC
TCTCTCTGTGTTTCTGGTGGGGTTTTTTTCGTTTTTTTTTTTTTNNNGGA
TTGGTACCCAAAAGTAGGAATTTATGGGTCAGCCAGTGGTTTTGTCGGGG
TTGGGGGGCATTGGCTTGCAAAGGATGTCGTTTGCTAATTCCGTGGCAT