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Marker Overview
Name | BNL1666 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL1666_orig
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Source Type | genomic |
Repeat Motif | (AG)14 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL1666_F: TGTCAGAAAAGTTTTTCCAAGG |
Primer 2 | BNL1666_R: AGATCATATTTAAAAGAAAAAGAAAACC |
Polymorphism | P_ BNL1666 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch15_Dt.01 | N/A | 83.9 | BNL1666 | View |
2 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch07_At.07 | N/A | 100.3 | BNL1666 | View |
3 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 67.18 | BNL1666 | View |
4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch15_Dt.01 | N/A | 48.8 | BNL1666 | View |
5 | Emian-22 x 3-79, BC1 (2011) | AD_ch15_Dt.01 | N/A | 112.92 | BNL1666 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 125 | BNL1666 | View |
7 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 52.7 | BNL1666 | View |
8 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch15_Dt.01 | N/A | 34.4 | BNL1666b | View |
9 | TM-1 x 3-79, RIL (2006) | AD_ch15_Dt.01 | N/A | 17.9 | BNL1666b | View |
10 | Monsanto SSR Bin Map, (2009) | AD_ch15_Dt.01 | N/A | 41 | BNL1666b | View |
11 | TM-1 x 3-79, RIL (2006) | AD_ch15_Dt.01 | N/A | 4.5 | BNL1666a | View |
12 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch15_Dt.01 | N/A | 5.7 | BNL1666-140 | View |
13 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 52.72 | BNL1666 | View |
Sequence
>BNL1666 ID=BNL1666; Name=BNL1666; organism=Gossypium hirsutum; type=genetic_marker; length=140bp TGTCAGAAAAGTTTTTCCAAGGTTTTCTTGTCAAACAGGCTCTTTTTTAT TTTTTTTTTCTGATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAG AGAGGTAGAAAAGGTTTTCTTTTTCTTTTAAATATGATCT
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