|
|
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | A1-97 x A2-47, F2 (1999) | A_AA_lg09 | N/A | 34 | A1695 | View |
| 2 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch20_Dt.10 | N/A | 0 | A1695 | View |
| 3 | Gtr x Gra, F2 (2004) | D.10 | N/A | 54.2 | A1695 | View |
| 4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch20_Dt.10 | N/A | 98.24 | A1695 | View |
| 5 | Pima S-7 x Empire, F2 (2007) | AD_ch20_Dt.10 | N/A | 10.8 | A1695 | View |
| 6 | Pima S-7 x im, F2 (2007) | AD_ch20_Dt.10 | N/A | 80.2 | A1695 | View |
| 7 | Pima S-7 x n2, F2 (2007) | AD_ch20_Dt.10 | N/A | 94.7 | A1695 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch10_At.10 | N/A | 129 | A1695 | View |
| 9 | AD-genome wide Reference Map (2009) | AD_ch14_Dt.02 | N/A | 45 | A1695 | View |
| 10 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 137 | A1695 | View |
| 11 | AD-genome wide Reference Map (2009) | AD_ch20_Dt.10 | N/A | 82 | A1695 | View |
| 12 | TM-1 x WT-936, F2 (2005) | AD_ch02_At.02 | N/A | 17.6 | A1695 | View |
| 13 | TM-1 x WT-936, F2 (2005) | AD_ch14_Dt.02 | N/A | 17.4 | A1695 | View |
| 14 | TM-1 x WT-936, F2 (2005) | AD_ch20_Dt.10 | N/A | 126.2 | A1695 | View |
| 15 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch20_Dt.10 | N/A | 161 | A1695b | View |
| 16 | Palmeri x K-101, F2 (2007) | AD_ch20_Dt.10 | N/A | 87.6 | A1695b | View |
| 17 | Palmeri x K-101, F2 (2007) | AD_ch10_At.10 | N/A | 76.1 | A1695a | View |
Sequence
>A1695 ID=A1695; Name=A1695; organism=Gossypium herbaceum; type=genetic_marker; length=1156bp
GTGGGATATCAAGCATGTGAAGGATTACAGGCTGATCAGCACCCAACATG
ACTCCCCTAGCAATCATGGGTACAAGGGCATACCCAATTTGTCCTGTAAA
TACAACAAAAACGAAAACATTGAATTTTAAATATATCAAAACCAAAACCA
AAAGAACAAGTCTGTGCTTCTGTTGGAAAATTTGATTCAGTTCCCAAGCA
CTTATTTTTTAATGTCATATCCGAAACATATCAAATTCCTCTATTTTCGA
GCTTGATCCAAAAACACATCTTCCATTACCAGGCCCGTTCTTGACATTTT
TGGGCCTTAAGCGAAATAATAAATTGGGCACCTTTTAAAAAAAATATAAA
ATGTAATACAATAAAATAAAAATATATACTAGTAATAAAATAAAAATTTG
GGGCCCCTTTTCTTTGCTTTTTTTTTCCTGCCTGCAATTAAGTGTCGATC
AAAAAATTTAAAGGCTGAATATTTTTTCAAAGAAATTTTTTGGGCCCCTT
CCAGCCCTAAGCCCTTGGCAGCCGCACTCCCAAACTATCCCAGGACCGGG
CCTGTCCATTCCAATCATGTAGAATTTACTTTCATTTATTTAATTATGGT
ACTAGCAAATCAACATGTTGATTTTTCAAACTAGACCTGTAAAATCGACA
TGTCGAGTTGATTCTGTGTCTGGATCAAAGTTCGAATTCGGGTCATTTCA
AATACGTCTCAAGTTCAGGTCGGTTTGGGTTGAAAGGTTTCATGTTGTTG
CCTGTAAAATCGGATTTGGTTGAATTTAGATTGGGGTTAATCAAGTTGAG
TTTTCGGGTTCCGGTAGAAATTGACAGTTGTAGTCCGAACTATAATGAAA
GTAAAAAAATTTCAAAACTCCGAATCATCATCCATCATTTAGCATATAAA
CTTCCACAAACACTACTTGAGCTACTACGCTTAGATCCAAGGCAAACTAA
TATATTTGTCAGTAAAACCTAGTACAAGGTCAATCATTTCTAATCCAAAC
AATTATCAGTCCGATCGAAACATAAGAAATAAAAACAAAGTTCAAGTCTA
AGTTAAGATTAACTGGACCAGATACTAGAGATCGGACTCGTCCAATTAAA
ATTACTAGATCGGAATATGTTACGTAAAGGATCTGAGAGGTGGAGCATAA
CAATAC
|
