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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | CAMD-E x Seaberry, F2 (1998) | AD_ch10_At.10 | N/A | 0 | A1158a | View |
| 2 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch10_At.10 | N/A | 0 | A1158a | View |
| 3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch10_At.10 | N/A | 2.9 | A1158a | View |
| 4 | Palmeri x K-101, F2 (2007) | AD_ch10_At.10 | N/A | 38.7 | A1158a | View |
| 5 | Pima S-7 x n2, F2 (2007) | AD_ch10_At.10 | N/A | 25.3 | A1158a | View |
| 6 | Sic'on x F-177, F2 (2004) | AD_ch10_At.10 | N/A | 0 | A1158a | View |
| 7 | CAMD-E x Seaberry, F2 (1998) | AD_ch20_Dt.10 | N/A | 24.2 | A1158b | View |
| 8 | Palmeri x K-101, F2 (2007) | AD_ch20_Dt.10 | N/A | 30.1 | A1158b | View |
| 9 | Pima S-7 x n2, F2 (2007) | AD_ch20_Dt.10 | N/A | 33.1 | A1158b | View |
| 10 | Gtr x Gra, F2 (2004) | D.10 | N/A | 27.3 | A1158 | View |
| 11 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch10_At.10 | N/A | 3.02 | A1158 | View |
| 12 | Pima S-7 x Empire, F2 (2007) | AD_ch10_At.10 | N/A | 0 | A1158 | View |
| 13 | AD-genome wide Reference Map (2009) | AD_ch10_At.10 | N/A | 67 | A1158 | View |
| 14 | AD-genome wide Reference Map (2009) | AD_ch20_Dt.10 | N/A | 166 | A1158 | View |
| 15 | TM-1 x WT-936, F2 (2005) | AD_ch20_Dt.10 | N/A | 6.8 | A1158 | View |
Sequence
>A1158 ID=A1158; Name=A1158; organism=Gossypium herbaceum; type=genetic_marker; length=1184bp
AAAAGGAGCACTACATGGATGTATGTATATGTATAATGAGGGGTGAGCCG
GATGACACCCTGTCGCTAGCCTAAATAGTAGCATTCACAAATTTGATATT
CACAAATTTAAGGTGTCAAATTATGATTTTAATTATTGTAATATCATCAA
ATTTGATATTTAATCTCTTTACTTATTTATTTTCGATCCCTTGTTATTAT
TGGCGTAAGGAATTAGTTGGAACTACTAACAATTTTAACATTTTCATTAT
TCATCTTATGTGGATTTATTTATATTTGACTTTTTGATTTGATTTTTTTT
CATATTCATATTCGCAATCATATACGGTAAGAAATTTATATAATTTATAT
CACGCTTACTCTTTTAGAAATGACGCCATTTAAAGATTTATATTTTTGAC
TTTTTGAAGGAGAGATTGCAAGAGCACTTTATTTGTTCTTAAAGGAAATG
TTATTTGAGTGTAAAATTTGTAAGTAAATTATTATTGTTGATTACTTTAC
AACTAGACATTTAAAGGAGAAAGTCTTAGTGAAAAGCTGATCTAAGCTAT
ATATAGGAATGAGATTACAATTTGATGAATGACTTAAACTCATTGGATTT
ATAAATTCTCATTAAAAAGTTGATTTATCAAAATTTTTGAAAATTTTCAT
TAAATCCTTTAAATATTAAAATTTTTAAATGAACCCCGAAAAAGTTAAAT
ATGATTGATTGCATCCCTCTATTGAGGATAATTCCTCCCCCTTTAAAACT
TCATTGAAGACAATGTTGAAAACATACTAGGAAACTGTCTGAGGCAACCC
TTGACAGCAAATATAGAACACTGTATTGTTTTCTCTTAACATTAGAAGTA
TATACATTTCAGACCCTTACTGTTATCTTCCTCTGTCTCCTCTGTTCAGA
AGGCTAAACAACTGTCTAGCTTCCAATTTAAAGGATGACTTTACATTTTT
ACCTCTTCTACCAGTGAAATATATATAGACTTATAAAAGCAAGAGCCACA
TATTGTTGCACCAAATCTATGGAATATTTTCNCATGATATACTCTGCTTG
ATCTTACATGTCTTACAAAGCCATTACATAATTATACATTATCAATCTTG
TTGTGCATATTACTGGCTATGTAACAGTCTCCCAATGACTACTCATCAGC
TGAAAACTTAGTACACTTTCTCNCCACTTGATCA
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