Trait Overview
Traitshort fiber content
Trait Categoryquality trait
AbbreviationSFC
DefinitionThe percent by weight of short fibers (12.7 mm or less) measured by Suter-Webb array method, or AFIS (Advance Fiber Information System), or the SFI from HVI (High Volume Instrument)
Descriptors[view all 5]
QTLs[view all 103]
Descriptors
GroupDescriptor
cotton_trait_descriptorSFCw (g)
RBTNSFC HVI (%)
cotton_trait_descriptorSFC HVI (%)
UZ_COTSFC HVI (%)
cotton_trait_descriptorSFCn (%)
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
qSFC.3T-F2_c01AD_ch01_At.01137.52137.47137.5293T-F2-2017View
qSFC.3T-F2_c02.1AD_ch02_At.0212.4112.40912.4113T-F2-2017View
qSFC.3T-F2_c02.2AD_ch02_At.0221.8121.77821.8713T-F2-2017View
qSFC.3T-F2_c02.3AD_ch02_At.0266.3265.8166.323T-F2-2017View
qSFC.3T-F2_c06.1AD_ch06_At.0660.860.7860.8093T-F2-2017View
qSFC.3T-F2_c06.2AD_ch06_At.06117.43117.39117.4393T-F2-2017View
qSFC.3T-F2_c07.1AD_ch07_At.0786.486.36886.4613T-F2-2017View
qSFC.3T-F2_c07.2AD_ch07_At.07107.8107.77107.8093T-F2-2017View
qSFC.3T-F2_c08AD_ch08_At.08155.7155.66155.7093T-F2-2017View
qSFC.3T-F2_c10AD_ch10_At.10116.82116.78116.8293T-F2-2017View
qSFC.3T-F2_c12AD_ch12_At.1242.342.25842.3813T-F2-2017View
qSFC.3T-F2_c14AD_ch14_Dt.02138.14138.1138.1493T-F2-2017View
qSFC.3T-F2_c17AD_ch17_Dt.0350.5150.4550.5193T-F2-2017View
qSFC.3T-F2_c19.1AD_ch19_Dt.051211.9512.013T-F2-2017View
qSFC.3T-F2_c19.2AD_ch19_Dt.05143.1143.099143.1013T-F2-2017View
qSFC.3T-F2_c19.3AD_ch19_Dt.05174.51174.44174.5193T-F2-2017View
qSFC.3T-F2_c20AD_ch20_Dt.1064.1163.264.533T-F2-2017View
qSFC.3T-F2_c25AD_ch25_Dt.0689.9289.8689.9293T-F2-2017View
qSFC.3T-F2_c26AD_ch26_Dt.1281.3581.1581.3593T-F2-2017View
qSFC.MAGIC-19831_ch01.hg13AD_ch01_At.0195.11294.11296.112MAGIC-19831-2018View
qSFC.MAGIC-19831_ch01.zk15AD_ch01_At.01--1MAGIC-19831-2018View
qSFC.MAGIC-19831_ch02.jz15AD_ch02_At.02150.485149.485151.485MAGIC-19831-2018View
qSFC.MAGIC-19831_ch02.zk14AD_ch02_At.02142.987141.987143.987MAGIC-19831-2018View
qSFC.MAGIC-19831_ch03.zk14AD_ch03_At.03106.829105.829107.829MAGIC-19831-2018View
qSFC.MAGIC-19831_ch06.hg13AD_ch06_At.0649.08348.08350.083MAGIC-19831-2018View
qSFC.MAGIC-19831_ch06.hg14AD_ch06_At.0649.08348.08350.083MAGIC-19831-2018View
qSFC.MAGIC-19831_ch06.zk15.1AD_ch06_At.0649.08348.08350.083MAGIC-19831-2018View
qSFC.MAGIC-19831_ch06.zk15.2AD_ch06_At.06132.246131.246133.246MAGIC-19831-2018View
qSFC.MAGIC-19831_ch08.jz15AD_ch08_At.0867.57366.57368.573MAGIC-19831-2018View
qSFC.MAGIC-19831_ch08.zk15.1AD_ch08_At.08101.487100.487102.487MAGIC-19831-2018View
qSFC.MAGIC-19831_ch08.zk15.2AD_ch08_At.08103.791102.791104.791MAGIC-19831-2018View
qSFC.MAGIC-19831_ch10.hg14AD_ch10_At.10130.393129.393131.393MAGIC-19831-2018View
qSFC.MAGIC-19831_ch11.hg14AD_ch11_At.11144.499143.499145.499MAGIC-19831-2018View
qSFC.MAGIC-19831_ch13.zk15AD_ch13_At.1354.0953.0955.09MAGIC-19831-2018View
qSFC.MAGIC-19831_ch15.hg14AD_ch15_Dt.0127.54326.54328.543MAGIC-19831-2018View
qSFC.MAGIC-19831_ch15.zk14AD_ch15_Dt.01147.662146.662148.662MAGIC-19831-2018View
qSFC.MAGIC-19831_ch19.zk15AD_ch19_Dt.05155.859154.859156.859MAGIC-19831-2018View
qSFC.MAGIC-19831_ch20.hg13AD_ch20_Dt.1097.15696.15698.156MAGIC-19831-2018View
qSFC.MAGIC-19831_ch23.hg14AD_ch23_Dt.0990.52389.52391.523MAGIC-19831-2018View
qSFC.MAGIC-19831_ch24.jz15AD_ch24_Dt.08112.827111.827113.827MAGIC-19831-2018View
qSFC.MAGIC-19831_ch25.jz15AD_ch25_Dt.0665.78764.78766.787MAGIC-19831-2018View
qSFC.MAGIC-19831_ch26.jz15AD_ch26_Dt.1298.44597.44599.445MAGIC-19831-2018View
qSFC.n2-F2_ch19AD_ch19_Dt.05-97.5111.8n2-F2-2007View
qSFC.n2-F2_ch26AD_ch26_Dt.12-88.4110.6n2-F2-2007View
qSFC.PA-F2_ch02-1.pop04-06AD_ch02_At.024.73.75.7PA-F2-2017View
qSFC.PA-F2_ch02-1.pop17-08AD_ch02_At.0247.146.148.1PA-F2-2017View
qSFC.PA-F2_ch03.pop35-09AD_ch03_At.0379.778.780.7PA-F2-2017View
qSFC.PA-F2_ch05.pop04-06AD_ch05_At.05253.8252.8254.8PA-F2-2017View
qSFC.PA-F2_ch05.pop35-08AD_ch05_At.05253.8252.8254.8PA-F2-2017View
qSFC.PA-F2_ch06.pop32-06AD_ch06_At.06167.3166.3168.3PA-F2-2017View
qSFC.PA-F2_ch07.pop01-06.1AD_ch07_At.0745.844.846.8PA-F2-2017View
qSFC.PA-F2_ch07.pop01-06.2AD_ch07_At.0766.665.667.6PA-F2-2017View
qSFC.PA-F2_ch07.pop12-08.1AD_ch07_At.07101.3100.3102.3PA-F2-2017View
qSFC.PA-F2_ch07.pop12-08.2AD_ch07_At.07172.9171.9173.9PA-F2-2017View
qSFC.PA-F2_ch07.pop12-08.3AD_ch07_At.07186.4185.4187.4PA-F2-2017View
qSFC.PA-F2_ch07.pop12-09AD_ch07_At.07186.4185.4187.4PA-F2-2017View
qSFC.PA-F2_ch07.pop27-06AD_ch07_At.0766.665.667.6PA-F2-2017View
qSFC.PA-F2_ch10.pop11-08AD_ch10_At.10102.6101.6103.6PA-F2-2017View
qSFC.PA-F2_ch12.pop06-06AD_ch12_At.12235.3234.3236.3PA-F2-2017View
qSFC.PA-F2_ch12.pop11-06AD_ch12_At.12102.5101.5103.5PA-F2-2017View
qSFC.PA-F2_ch12.pop32-06AD_ch12_At.12180.9179.9181.9PA-F2-2017View
qSFC.PA-F2_ch16-1.pop07-06AD_ch16_Dt.0739.338.340.3PA-F2-2017View
qSFC.PA-F2_ch16-1.pop27-06AD_ch16_Dt.07137.9136.9138.9PA-F2-2017View
qSFC.PA-F2_ch17-1.pop02-06AD_ch17_Dt.0313.812.814.8PA-F2-2017View
qSFC.PA-F2_ch17-1.pop20-06AD_ch17_Dt.03226.3225.3227.3PA-F2-2017View
qSFC.PA-F2_ch17-1.pop20-09AD_ch17_Dt.03226.3225.3227.3PA-F2-2017View
qSFC.PA-F2_ch19.pop08-06AD_ch19_Dt.0536.435.437.4PA-F2-2017View
qSFC.PA-F2_ch19.pop11-06AD_ch19_Dt.0591.190.192.1PA-F2-2017View
qSFC.PA-F2_ch19.pop11-08AD_ch19_Dt.0536.435.437.4PA-F2-2017View
qSFC.PA-F2_ch19.pop12-08AD_ch19_Dt.05169.4168.4170.4PA-F2-2017View
qSFC.PA-F2_ch19.pop27-06AD_ch19_Dt.05157.4156.4158.4PA-F2-2017View
qSFC.PA-F2_ch21.pop03-06AD_ch21_Dt.11259.7258.7260.7PA-F2-2017View
qSFC.PA-F2_ch21.pop20-08AD_ch21_Dt.115.54.56.5PA-F2-2017View
qSFC.PA-F2_ch24.pop01-06AD_ch24_Dt.0822.321.323.3PA-F2-2017View
qSFC.PK-ch12AD_ch12_At.12--4.5PK-F2-2007View
qSFC.PK-ch18AD_ch18_Dt.13-135.1157.5PK-F2-2007View
qSFC.PK-ch19.1AD_ch19_Dt.05-40.352.1PK-F2-2007View
qSFC.PK-ch19.2AD_ch19_Dt.05-114167.9PK-F2-2007View
qSFC.PK-ch19.3AD_ch19_Dt.05-144154PK-F2-2007View
qSFC.PK-ch20AD_ch20_Dt.10-25.137.1PK-F2-2007View
qSFC.PK-ch26.1AD_ch26_Dt.12--20PK-F2-2007View
qSFC.PK-ch26.2AD_ch26_Dt.12-72.194.4PK-F2-2007View
qSFC.PK-ch3AD_ch03_At.03-6276.8PK-F2-2007View
qSFC.PK-ch6AD_ch06_At.06-126.7126.8PK-F2-2007View
qSFC.T3-RIL_ch12.shAD_ch12_At.124.94.77.5T3-RIL-2014View
qSFC.T3-RIL_ch14.csAD_ch14_Dt.0260.660.661.2T3-RIL-2014View
qSFC.T3-RIL_ch15.csAD_ch15_Dt.0152.952.953.2T3-RIL-2014View
qSFC.T3-RIL_ch6.csAD_ch06_At.0628.628.633.1T3-RIL-2014View
qSFC.TP-BC3F2.94-24_ch05.A1318AD_ch05_At.05---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-24_ch05.G1112AD_ch05_At.05---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-24_ch19.P02-09AD_ch19_Dt.05---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-28_ch19.pAR0137AD_ch19_Dt.05---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch12.pAR0101AD_ch12_At.12---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch12.pAR03-42AD_ch12_At.12---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch17.pAR0101AD_ch17_Dt.03---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch17.pAR0172AD_ch17_Dt.03---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch18.P09-53AD_ch18_Dt.13---TP-BC3F2-2005View
qSFC.TP-BC3F2.94-29_ch26.pAR0101AD_ch26_Dt.12---TP-BC3F2-2005View
qSFC.Z8-RIL_ch23.gy02AD_ch23_Dt.0932.1528.139.8Z8-RIL-2007View
qSFC.Z8-RIL_ch25.gy02AD_ch25_Dt.0610.4210.410.5Z8-RIL-2007View
qSFC.Z8-RIL_ch25.gy03AD_ch25_Dt.066.176.29.5Z8-RIL-2007View
qSFC.Z8-RIL_lg09.jp02AD_chU18.01-22Z8-RIL-2007View
qSFC.Z8-RIL_lg10.jp03AD_chU4.01-18.3Z8-RIL-2007View
DatasetType
TP-BC3F2-2005QTL
NCGC germplasm evaluation, CS07phenotype
NCGC germplasm evaluation, CS08phenotype
NCGC germplasm evaluation, CS09phenotype
NCGC germplasm evaluation, CS10phenotype
NCGC germplasm evaluation, CS11phenotype
NCGC germplasm evaluation, T01phenotype
NCGC germplasm evaluation, T02phenotype
NCGC germplasm evaluation, T03phenotype
NCGC germplasm evaluation, T04phenotype
NCGC germplasm evaluation, T05phenotype
NCGC germplasm evaluation, T06phenotype
NCGC germplasm evaluation, T07phenotype
NCGC germplasm evaluation, T08phenotype
NCGC germplasm evaluation, T09phenotype
NCGC germplasm evaluation, T14phenotype
NCGC germplasm evaluation, T89phenotype
NCGC germplasm evaluation, T91phenotype
NCGC germplasm evaluation, T92phenotype
NCGC germplasm evaluation, T94phenotype
NCGC germplasm evaluation, T95phenotype
NCGC germplasm evaluation, T96phenotype
NCGC germplasm evaluation, T97phenotype
NCGC germplasm evaluation, T98phenotype
NCGC germplasm evaluation, WS93GHphenotype
NCGC germplasm evaluation, GH06phenotype
NCGC germplasm evaluation, GH08phenotype
NCGC germplasm evaluation, GH10phenotype
NCGC germplasm evaluation, GH11phenotype
NCGC germplasm evaluation, GH12phenotype
NCGC germplasm evaluation, GHphenotype
T3-RIL-2014QTL
ILTM-F2:3-2014QTL
PA-F2-2017QTL
MAGIC-19831-2018QTL
RBTN 2005phenotype
RBTN 2006phenotype
RBTN 2007phenotype
RBTN 2010phenotype
RBTN 2011phenotype
RBTN 2012phenotype
RBTN 2013phenotype
RBTN 2014phenotype
RBTN 2015phenotype
RBTN 2016phenotype
RBTN 2017phenotype
RBTN 2018phenotype
RBTN 2019phenotype
RBTN 2020phenotype
RBTN 2021phenotype
RBTN 2022phenotype
YearPublication
2018Huang C, Shen C, Wen T, Gao B, Zhu , Li X, Ahmed MM, Li D, Lin Z. SSR-based association mapping of fiber quality in upland cotton using an eight-way MAGIC population. Molecular genetics and genomics : MGG. 2018 Feb 01.
2017Huang C, Nie X, Shen C, You C, Li W, Zhao W, Zhang X, Lin Z. Population structure and genetic basis of the agronomic traits of upland cotton in China revealed by a genome-wide association study using high-density SNPs. Plant Biotechnol J. 2017 Nov;15(11):1374-1386.
2017Wang, B, Draye, X, Zhuang, Z, Zhang, Z, Liu, M, Lubbers, EL, Jones D, May OL, Paterson AH, Chee PW. QTL analysis of cotton fiber length in advanced backcross populations derived from a cross between Gossypium hirsutum and G. mustelinum. Theor Appl Genet. 2017 Mar 27; 130:1297–1308.
2014Yu JZ, Ulloa M, Hoffman SM, Kohel RJ, Pepper AE, Fang DD, Percy RG, Burke JJ. Mapping genomic loci for cotton plant architecture, yield components, and fiber properties in an interspecific (Gossypium hirsutum L. × G. barbadense L.) RIL population. Molecular genetics and genomics : MGG. 2014 Oct 15.
2007Rong J, Feltus FA, Waghmare VN, Pierce GJ, Chee PW, Draye X, Saranga Y, Wright RJ, Wilkins TA, May OL, Smith CW, Gannaway JR, Wendel JF, Paterson AH. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development. Genetics. 2007 Aug; 176(4):2577-88
2006EUP-152-367
2005Chee P, Draye X, Jiang C, Decanini L, Delmonte T, Bredhauer R, Smith C, Paterson A. Molecular dissection of phenotypic variation between Gossypium hirsutum and Gossypium barbadense (cotton) by a backcross-self approach. III. Fiber length. Theoretical and applied genetics. 2005; 111(4):772-781