High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.)

Publication Overview
TitleHigh Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.)
AuthorsZhang Z, Li J, Muhammad J, Cai J, Jia F, Shi Y, Gong J, Shang H, Liu A, Chen T, Ge Q, Palanga KK, Lu Q, Deng X, Tan Y, Li W, Sun L, Gong W, Yuan Y
TypeJournal Article
Journal NamePloS one
Volume10
Issue8
Year2015
Page(s)e0135430
CitationZhang Z, Li J, Muhammad J, Cai J, Jia F, Shi Y, Gong J, Shang H, Liu A, Chen T, Ge Q, Palanga KK, Lu Q, Deng X, Tan Y, Li W, Sun L, Gong W, Yuan Y. High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.). PloS one. 2015; 10(8):e0135430.

Abstract

Cotton (Gossypium hirsutum L.) is an important agricultural crop that provides renewable natural fiber resources for the global textile industry. Technological developments in the textile industry and improvements in human living standards have increased the requirement for supplies and better quality cotton. Upland cotton 0-153 is an elite cultivar harboring strong fiber strength genes. To conduct quantitative trait locus (QTL) mapping for fiber quality in 0-153, we developed a population of 196 recombinant inbred lines (RILs) from a cross between 0-153 and sGK9708. The fiber quality traits in 11 environments were measured and a genetic linkage map of chromosome 25 comprising 210 loci was constructed using this RIL population, mainly using simple sequence repeat markers and single nucleotide polymorphism markers. QTLs were identified across diverse environments using the composite interval mapping method. A total of 37 QTLs for fiber quality traits were identified on chromosome 25, of which 17 were stably expressed in at least in two environments. A stable fiber strength QTL, qFS-chr25-4, which was detected in seven environments and was located in the marker interval between CRI-SNP120491 and BNL2572, could explain 6.53%-11.83% of the observed phenotypic variations. Meta-analysis also confirmed the above QTLs with previous reports. Application of these QTLs could contribute to improving fiber quality and provide information for marker-assisted selection.

Features
This publication contains information about 81 features:
Feature NameUniquenameType
fiber strengthqFS.0s-RIL.15_ch25.ak09.1QTL
fiber strengthqFS.0s-RIL.15_ch25.ak09.2QTL
fiber strengthqFS.0s-RIL.15_ch25.ak09.3QTL
fiber strengthqFS.0s-RIL.15_ch25.ak09.4QTL
fiber strengthqFS.0s-RIL.15_ch25.ay07QTL
fiber strengthqFS.0s-RIL.15_ch25.ay09.1QTL
fiber strengthqFS.0s-RIL.15_ch25.ay09.2QTL
fiber strengthqFS.0s-RIL.15_ch25.ay10.1QTL
fiber strengthqFS.0s-RIL.15_ch25.ay10.2QTL
fiber strengthqFS.0s-RIL.15_ch25.ay10.3QTL
fiber strengthqFS.0s-RIL.15_ch25.ay13.1QTL
fiber strengthqFS.0s-RIL.15_ch25.ay13.2QTL
fiber strengthqFS.0s-RIL.15_ch25.gy10.1QTL
fiber strengthqFS.0s-RIL.15_ch25.gy10.2QTL
fiber strengthqFS.0s-RIL.15_ch25.lq08QTL
fiber strengthqFS.0s-RIL.15_ch25.qz09QTL
fiber strengthqFS.0s-RIL.15_ch25.zz10QTL
micronaireqMIC.0s-RIL.15_ch25.ak09QTL
micronaireqMIC.0s-RIL.15_ch25.ay08.1QTL
micronaireqMIC.0s-RIL.15_ch25.ay08.2QTL
micronaireqMIC.0s-RIL.15_ch25.ay13.1QTL
micronaireqMIC.0s-RIL.15_ch25.ay13.2QTL
micronaireqMIC.0s-RIL.15_ch25.gy10.1QTL
micronaireqMIC.0s-RIL.15_ch25.gy10.2QTL
micronaireqMIC.0s-RIL.15_ch25.lq08.1QTL

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
0s-RIL-2015
Featuremaps
This publication contains information about 1 maps:
Map Name
0-153 x sGK9708, RIL (2015)
Properties
Additional details for this publication include:
Property NameValue
eISSN1932-6203
Publication TypeJournal Article
Journal CountryUnited States
Publication Date2015
Journal AbbreviationPLoS ONE
DOI10.1371/journal.pone.0135430
Elocation10.1371/journal.pone.0135430
Publication ModelElectronic-eCollection
ISSN1932-6203
LanguageEnglish
Language Abbreng