High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.)

Overview
TitleHigh Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.)
AuthorsZhang Z, Li J, Muhammad J, Cai J, Jia F, Shi Y, Gong J, Shang H, Liu A, Chen T, Ge Q, Palanga KK, Lu Q, Deng X, Tan Y, Li W, Sun L, Gong W, Yuan Y
TypeJournal Article
Journal NamePloS one
Volume10
Issue8
Year2015
Page(s)e0135430
CitationZhang Z, Li J, Muhammad J, Cai J, Jia F, Shi Y, Gong J, Shang H, Liu A, Chen T, Ge Q, Palanga KK, Lu Q, Deng X, Tan Y, Li W, Sun L, Gong W, Yuan Y. High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.). PloS one. 2015; 10(8):e0135430.

Abstract

Cotton (Gossypium hirsutum L.) is an important agricultural crop that provides renewable natural fiber resources for the global textile industry. Technological developments in the textile industry and improvements in human living standards have increased the requirement for supplies and better quality cotton. Upland cotton 0-153 is an elite cultivar harboring strong fiber strength genes. To conduct quantitative trait locus (QTL) mapping for fiber quality in 0-153, we developed a population of 196 recombinant inbred lines (RILs) from a cross between 0-153 and sGK9708. The fiber quality traits in 11 environments were measured and a genetic linkage map of chromosome 25 comprising 210 loci was constructed using this RIL population, mainly using simple sequence repeat markers and single nucleotide polymorphism markers. QTLs were identified across diverse environments using the composite interval mapping method. A total of 37 QTLs for fiber quality traits were identified on chromosome 25, of which 17 were stably expressed in at least in two environments. A stable fiber strength QTL, qFS-chr25-4, which was detected in seven environments and was located in the marker interval between CRI-SNP120491 and BNL2572, could explain 6.53%-11.83% of the observed phenotypic variations. Meta-analysis also confirmed the above QTLs with previous reports. Application of these QTLs could contribute to improving fiber quality and provide information for marker-assisted selection.

Featuremaps
This publication contains information about 1 maps:
Map Name
0-153 x sGK9708, RIL (2015)
Projects
This publication contains information about 1 projects:
Project NameDescription
0s-RIL-2015
Features
This publication contains information about 81 features:
Feature NameUniquenameType
SWU19999SWU19999genetic_marker
SWU19979SWU19979genetic_marker
SWU19721SWU19721genetic_marker
SWU19711SWU19711genetic_marker
SWU19607SWU19607genetic_marker
SWU19568SWU19568genetic_marker
SWU19320SWU19320genetic_marker
SWU19259SWU19259genetic_marker
SWU19247SWU19247genetic_marker
SWU19244SWU19244genetic_marker
SWU19242SWU19242genetic_marker
SWU19235SWU19235genetic_marker
SWU19199SWU19199genetic_marker
SWU19198SWU19198genetic_marker
SWU19179SWU19179genetic_marker
SWU19175SWU19175genetic_marker
SWU19140SWU19140genetic_marker
SWU19139SWU19139genetic_marker
SWU19120SWU19120genetic_marker
SWU19106SWU19106genetic_marker
SWU19071SWU19071genetic_marker
SWU19068SWU19068genetic_marker
SWU19062SWU19062genetic_marker
SWU19060SWU19060genetic_marker
SWU19048SWU19048genetic_marker

Pages

Properties
Additional details for this publication include:
Property NameValue
Publication TypeJournal Article
Journal CountryUnited States
eISSN1932-6203
Publication Date2015
Journal AbbreviationPLoS ONE
DOI10.1371/journal.pone.0135430
Elocation10.1371/journal.pone.0135430
Publication ModelElectronic-eCollection
ISSN1932-6203
LanguageEnglish
Language Abbreng
Cross References
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DatabaseAccession
PMID: PubMedPMID:26262992