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Map Overview
Name | 0-153 x sGK9708, RIL (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | JoinMap 4.0 |
Map type | genetic |
Population type | RIL |
Population size | 196 |
Genome group | AD |
Map unit | cM |
Maternal parent | 0-153 |
Paternal parent | sGK9708 |
Population size | 196 |
Number of loci | 209 |
Number of QTL | 47 |
Number of linkage groups | 1 |
Publication | [view all] |
Contact | Yuan, You-Lu
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Map Loci
This map contains 209 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | SWU19999 | SWU19999 | marker_locus | 0 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SHH90056 | SHH90056 | marker_locus | 1.91 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | SWU19721 | SWU19721 | marker_locus | 6.98 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP134168 | CRI-SNP134168 | marker_locus | 9.52 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | SHIN-1131 | SHIN-1131b | marker_locus | 9.65 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP136807 | CRI-SNP136807 | marker_locus | 10.64 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | SWU19979 | SWU19979 | marker_locus | 11.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP097844 | CRI-SNP97844 | marker_locus | 11.33 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP093549 | CRI-SNP93549 | marker_locus | 12.05 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP145970 | CRI-SNP145970 | marker_locus | 13.68 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP056440 | CRI-SNP56440 | marker_locus | 14.32 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP197128 | CRI-SNP197128 | marker_locus | 15.22 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP176340 | CRI-SNP176340 | marker_locus | 15.52 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP058418 | CRI-SNP58418 | marker_locus | 15.99 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP070755 | CRI-SNP70755 | marker_locus | 16.94 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP176298 | CRI-SNP176298 | marker_locus | 17.62 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP079666 | CRI-SNP79666 | marker_locus | 18.05 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP073050 | CRI-SNP73050 | marker_locus | 19.13 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP121304 | CRI-SNP121304 | marker_locus | 19.48 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP182632 | CRI-SNP182632 | marker_locus | 20.41 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP176765 | CRI-SNP176765 | marker_locus | 20.88 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | SWU19607 | SWU19607 | marker_locus | 25.26 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP011216 | CRI-SNP11216 | marker_locus | 26.68 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | Gh478 | GH478 | marker_locus | 26.83 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | CCRI_SNP042068 | CRI-SNP42068 | marker_locus | 27.44 cM |
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Map QTL
This map contains 47 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.zz10.2 | QTL | 73.28 cM | 74.11 cM | 73.31 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.gy10.2 | QTL | 73.28 cM | 74.11 cM | 73.31 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.qz09.2 | QTL | 68.07 cM | 68.34 cM | 68.31 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.lq08.3 | QTL | 68.07 cM | 68.34 cM | 68.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.ay09.2 | QTL | 63.99 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.ak09 | QTL | 63.99 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.zz10.1 | QTL | 63.8 cM | 65.92 cM | 64.81 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.qz09.1 | QTL | 63.8 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.qz08.2 | QTL | 63.8 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.lq08.2 | QTL | 63.8 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.gy10.1 | QTL | 63.8 cM | 65.92 cM | 64.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.qz08.1 | QTL | 58.08 cM | 58.55 cM | 58.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.lq08.1 | QTL | 58.08 cM | 58.55 cM | 58.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.ay13.2 | QTL | 58.08 cM | 58.55 cM | 58.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qMIC.0s-RIL.15_ch25.ay08.2 | QTL | 58.08 cM | 58.55 cM | 58.11 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.qz09.3 | QTL | 53.13 cM | 54.48 cM | 54.48 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.gy10.3 | QTL | 53.13 cM | 54.48 cM | 54.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.ay10.4 | QTL | 53.13 cM | 54.48 cM | 54.48 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.ay09.1 | QTL | 53.13 cM | 54.48 cM | 54.48 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qFS.0s-RIL.15_ch25.gy10.2 | QTL | 52.67 cM | 54.48 cM | 54.01 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qFS.0s-RIL.15_ch25.ay09.2 | QTL | 52.67 cM | 54.48 cM | 54.41 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qFS.0s-RIL.15_ch25.ay10.3 | QTL | 51.15 cM | 51.66 cM | 51.15 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qFS.0s-RIL.15_ch25.ak09.4 | QTL | 51.15 cM | 51.66 cM | 51.31 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.qz09.2 | QTL | 48.32 cM | 50.45 cM | 49.71 cM |
0-153 x sGK9708, RIL (2015).0s-RIL.15_chr25 | qUHML.0s-RIL.15_ch25.gy10.2 | QTL | 48.32 cM | 50.45 cM | 49.71 cM |
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Stock
Name | Type | Details |
0-153 x sGK9708, RIL | population | Secondary id: | cdbpop_000157 | Origin detail: | China | Population size: | 196 | Alias: | 0s-RIL | Pedigree: | 0-153 / sGK9708 |
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Publication
Year | Publications |
2015 | Zhang Z, Li J, Muhammad J, Cai J, Jia F, Shi Y, Gong J, Shang H, Liu A, Chen T, Ge Q, Palanga KK, Lu Q, Deng X, Tan Y, Li W, Sun L, Gong W, Yuan Y. High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.). PloS one. 2015; 10(8):e0135430. |
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