New SNP/Indel markers and genome locations available (11/22)

Over 25K CRI_A2 SNP/InDel markers and positions on Gossypium arboreum (A2) genome available.  Data can be accessed via Search Markers Or MegaSearch "Marker".

Project Information

The 50K Cotton SNP chip on the Affymetrix-Axiom platform with financial support from DBT (Govt. of India).

New map, QTL and phenotype data available (9/22)

An interspecies genetic map developed based on the cross of between two Indian cultivars with 88 QTLs of 15 yield component and fiber quality traits and phenotype data available. (9/30/22)

Add Standard LG/Chromosome Names to enhance data queries (9/22)

Standardized Names of Linkage Group (of genetic maps) and Chromosome (of whole genomes) have been added in MegaSearchs' Gene, Marker, QTL searches.  These standardized names allow users to find genes/markers/QTLs that are located on the same chromosome/linkage group as well as on different genetic maps or genomes.  Below is an example of using standardized names in MegaSearch QTL:

Example: To find seed cotton yield QTLs from tetraploid genetic maps chromosome 7 (At.07).