Gsto_12G016690.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 2.920e-91 Identity = 135/201 (67.16%), Postives = 158/201 (78.61%), Query Frame = 0
Query: 26 QIPQF-LSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLT 225
Q P F L N+R ++A+ SS SP A SS GLYS++ F+LT QNVDLVL+DVRP+LI+DGGNVDV+SVEDG++SLKLQGAC SCPSS+TTM MGIERVLKEKFGDA+KDIRQV+D+E K+ TVEAVN HLDILRPAIKNYGGSVEVLS+E +CVV Y GPE+IG GI+AAIKEKF DI+NV T
Sbjct: 32 QNPSFVLFANKRRHISRTAIFHRSAISGSSQGEKISPLASGVSS--GLYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFT 230
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.019e-27 Identity = 63/154 (40.91%), Postives = 93/154 (60.39%), Query Frame = 0
Query: 77 QFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK-ETTVEAVNRHLDILRP-AIKNYGGSVEVLSIEEGECVVSYTGPE----TIGSGIKAAIKEKFPDITNVVL 224
+ LT +NV+ VLD++RPYL++DGGNV + ++ I+ +KLQGAC SCPSST TMKMGIER L EK + V + + D+E E E + + L+ +RP I GS++++ IE+ + TGP T+ + ++EK P I V L
Sbjct: 82 EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVA-VEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQL 234
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.565e-25 Identity = 66/157 (42.04%), Postives = 88/157 (56.05%), Query Frame = 0
Query: 74 SSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK-ETTVEAVNRHLDILRPAIKNY-GGSVEVLSIEEGECVVSYTGPETIGSGIKAAI----KEKFPDITNVVL 224
++ Q LTA NV+ VLD VRPYL ADGG+V + + ++ LKLQGAC SCPSS T+K GIER L EK D V + V D E E E V + L+ +RP + GG ++ L I+ V TGP + ++ A+ +EK P I V L
Sbjct: 69 TAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQL 224
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.033e-22 Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 0
Query: 80 LTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK--ETTVEAVNRHLDILRPAIKNY-GGSVEVLSIEEGECVVSYTGPE----TIGSGIKAAIKEKFPDITNVVL 224
LT +NV+ VLD+VRP L+ADGGNV + ++ ++ LKLQGAC SCPSS+ T+KMGIE L++K + + + Q + E E E + + L LRP + GG +E++ I+ V TGP T+ + ++E P I V L
Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPE-IMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAVQL 234
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) OX=224308 GN=yutI PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.654e-15 Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 0
Query: 83 QNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVL 139
+ V VLD +RP+L+ DGG+ +++ V++GI+ L+L GAC SCPSST T+K GIER L
Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 97
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NFU1_HUMAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo sapiens OX=9606 GN=NFU1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.596e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0
Query: 57 SSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKE 160
+ +PS AGS E+ A +L+ +RP + DGG+V EDGI+ LKLQG+C SCPSS T+K GI+ +L + + V+ + QV DDE E
Sbjct: 153 TEETPSGEAGSEEDD-------EVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVEQVMDDESDE 248
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.843e-12 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 88 VLDD-VRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFG 144
VLD+ VRP LIADGG+V++ V+ I+ + LQGAC SCPSST T+K+ IE L+++
Sbjct: 47 VLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRIN 104
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NFU1_DROAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila ananassae OX=7217 GN=GF20932 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.023e-11 Identity = 31/85 (36.47%), Postives = 54/85 (63.53%), Query Frame = 0
Query: 92 VRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYD--DEQKETTVEAVNRHLDILR 174
+RP + DGG++ + E+GI+ LK+QG+C SCPSS T+K G++ +L + + V+ + QV+D D+ ++ E R+L L+
Sbjct: 190 IRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVEQVFDAVDKMADSEFERFERNLKALK 273
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NFU1_MOUSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus OX=10090 GN=Nfu1 PE=1 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 3.036e-11 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 79 ELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKE 160
E+ A +L+ +RP + DGG+V EDGI+ LKLQG+C SCPSS T+K GI+ +L + + V+ + QV DD++ +
Sbjct: 168 EVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPEVEGVEQVMDDDESD 248
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Match: NFU1_DROPE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila persimilis OX=7234 GN=GL13432 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.235e-11 Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 0
Query: 92 VRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK--ETTVEAVNRHLDILRPA 176
+RP + DGG++ +S E+G++ LK+QG+C SCPSS T+K G++ +L + + V+ + QV+DD + + E ++L PA
Sbjct: 186 IRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVEQVFDDADRMADKEFERFEKNLKQKEPA 271
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT4G01940.1 (| Symbols: NFU1, AtCNFU1 | NFU domain protein 1 | chr4:842265-843388 REVERSE LENGTH=231) HSP 1 Score: 270.781 bits (691), Expect = 3.062e-92 Identity = 135/201 (67.16%), Postives = 158/201 (78.61%), Query Frame = 0
Query: 26 QIPQF-LSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLT 225
Q P F L N+R ++A+ SS SP A SS GLYS++ F+LT QNVDLVL+DVRP+LI+DGGNVDV+SVEDG++SLKLQGAC SCPSS+TTM MGIERVLKEKFGDA+KDIRQV+D+E K+ TVEAVN HLDILRPAIKNYGGSVEVLS+E +CVV Y GPE+IG GI+AAIKEKF DI+NV T
Sbjct: 32 QNPSFVLFANKRRHISRTAIFHRSAISGSSQGEKISPLASGVSS--GLYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFT 230
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT5G49940.1 (| Symbols: ATCNFU2, NFU2 | NIFU-like protein 2, CHLOROPLAST-LOCALIZED NIFU-LIKE PROTEIN 2 | chr5:20315464-20317228 FORWARD LENGTH=235) HSP 1 Score: 107.071 bits (266), Expect = 3.131e-28 Identity = 63/154 (40.91%), Postives = 93/154 (60.39%), Query Frame = 0
Query: 77 QFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK-ETTVEAVNRHLDILRP-AIKNYGGSVEVLSIEEGECVVSYTGPE----TIGSGIKAAIKEKFPDITNVVL 224
+ LT +NV+ VLD++RPYL++DGGNV + ++ I+ +KLQGAC SCPSST TMKMGIER L EK + V + + D+E E E + + L+ +RP I GS++++ IE+ + TGP T+ + ++EK P I V L
Sbjct: 82 EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVA-VEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQL 234
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT4G25910.1 (| Symbols: NFU3, ATCNFU3 | NFU domain protein 3 | chr4:13164128-13165094 FORWARD LENGTH=236) HSP 1 Score: 94.3597 bits (233), Expect = 2.104e-23 Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 0
Query: 80 LTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQK--ETTVEAVNRHLDILRPAIKNY-GGSVEVLSIEEGECVVSYTGPE----TIGSGIKAAIKEKFPDITNVVL 224
LT +NV+ VLD+VRP L+ADGGNV + ++ ++ LKLQGAC SCPSS+ T+KMGIE L++K + + + Q + E E E + + L LRP + GG +E++ I+ V TGP T+ + ++E P I V L
Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPE-IMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAVQL 234
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT5G49940.2 (| Symbols: ATCNFU2, NFU2 | NIFU-like protein 2, CHLOROPLAST-LOCALIZED NIFU-LIKE PROTEIN 2 | chr5:20315464-20317067 FORWARD LENGTH=185) HSP 1 Score: 90.5077 bits (223), Expect = 2.644e-22 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0
Query: 80 LTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDE 157
LT +NV+ VLD++RPYL++DGGNV + ++ I+ +KLQGAC SCPSST TMKMGIER L EK + V + + D+E
Sbjct: 85 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVA-VEALPDEE 161
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT3G20970.1 (| Symbols: NFU4, ATNFU2 | NFU domain protein 4, ARABIDOPSIS THALIANA NFU DOMAIN PROTEIN 2 | chr3:7348277-7350069 FORWARD LENGTH=283) HSP 1 Score: 62.003 bits (149), Expect = 3.364e-11 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
Query: 79 ELTAQNVDLVLDDVRPYLIADGGNVDVLSV--EDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNR 168
E A +L+ +RP + DGG+++ E GI+ L++QGAC CPSS+ T+K GIE +L + VK + Q +D E +E T+ R
Sbjct: 191 ETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMH-YVSEVKGVEQEFDGEDEEGTLSGEMR 281
BLAST of Gsto_12G016690.1 vs. Araport11
Match: AT1G51390.1 (| Symbols: NFU5, ATNFU1 | NFU domain protein 5 | chr1:19050427-19051753 FORWARD LENGTH=275) HSP 1 Score: 60.8474 bits (146), Expect = 7.179e-11 Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 79 ELTAQNVDLVLDDVRPYLIADGGNVDV--LSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETT 162
E A +L+ +RP + DGG+++ E GI+ L++QGAC CPSS+ T+K GIE +L + VK + Q +D E++ T+
Sbjct: 186 ETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE-VKGVEQEFDGEEEGTS 270
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A9D3V875_9ROSI (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium stocksii OX=47602 GN=J1N35_026213 PE=3 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 5.970e-163 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A7J8XNJ8_GOSAI (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_006640 PE=3 SV=1) HSP 1 Score: 451.055 bits (1159), Expect = 5.517e-160 Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A7J8ME95_9ROSI (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium lobatum OX=34289 GN=Golob_008035 PE=3 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 3.228e-159 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQ PQFLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQFPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A1U8N9B1_GOSHI (NifU-like protein 1, chloroplastic OS=Gossypium hirsutum OX=3635 GN=LOC107946015 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 3.889e-159 Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYL+ADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAI+NYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLLADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIRNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A7J9H7H4_9ROSI (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_004847 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 4.322e-159 Identity = 222/226 (98.23%), Postives = 222/226 (98.23%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKT IFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSY GPETIGSGIK AIKEKFPDITNV LTG
Sbjct: 1 MASIAGIRLTKTPIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYKGPETIGSGIKTAIKEKFPDITNVELTG 226
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A5D2AB33_GOSDA (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_D12G150200v1 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 4.636e-159 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQK AVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKIAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A5J5NYE3_GOSBA (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D12G141400v1 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 4.636e-159 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQK AVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKIAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A7J9EHU0_9ROSI (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium trilobum OX=34281 GN=Gotri_007945 PE=3 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 9.356e-159 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNV LTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVELTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A5D2SEL3_GOSMU (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D12G143000v1 PE=3 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 1.127e-158 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTKTLIFSSPQTLTKPLQIP FLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPPFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Match: A0A5D2E9K5_GOSDA (NIF system FeS cluster assembly NifU C-terminal domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A12G142200v1 PE=3 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 1.258e-158 Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0
Query: 1 MASIAGIRLTKTLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSSSSPSAPAGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 226
MASIAGIRLTK LIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS PSAP+GSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG
Sbjct: 1 MASIAGIRLTKNLIFSSPQTLTKPLQIPQFLSLNQRIRFPSGRTHQKTAVKASSSSSS--PSAPSGSSSTGLYSSKQFELTAQNVDLVLDDVRPYLIADGGNVDVLSVEDGIISLKLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDDEQKETTVEAVNRHLDILRPAIKNYGGSVEVLSIEEGECVVSYTGPETIGSGIKAAIKEKFPDITNVVLTG 224 The following BLAST results are available for this feature:
BLAST of Gsto_12G016690.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-09-19 (BLASTP of HAU v1.0 Gossypium stocksii (E1) proteins vs UniProt Swissprot) Total hits: 10
BLAST of Gsto_12G016690.1 vs. Araport11
Analysis Date: 2023-09-19 (BLASTP of HAU v1.0 Gossypium stocksii (E1) proteins vs arabidopsis Araport11) Total hits: 6
BLAST of Gsto_12G016690.1 vs. ExPASy TrEMBL
Analysis Date: 2023-09-19 (BLASTP of HAU v1.0 Gossypium stocksii (E1) proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium stocksii (E1) proteins
Date Performed: 2023-09-19
Sequences
The
following sequences are available for this feature:
mRNA sequence >Gsto_12G016690.1_E1_HAU_v1 ID=Gsto_12G016690.1_E1_HAU_v1; Name=Gsto_12G016690.1; organism=Gossypium stocksii; type=mRNA; length=681bpback to top protein sequence of Gsto_12G016690.1_E1_HAU_v1 >Gsto_12G016690.1_E1_HAU_v1 ID=Gsto_12G016690.1_E1_HAU_v1; Name=Gsto_12G016690.1_E1_HAU_v1; organism=Gossypium stocksii; type=polypeptide; length=227bpback to top mRNA from alignment at Chr12:27445824..27447049+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Gsto_12G016690.1_E1_HAU_v1 ID=Gsto_12G016690.1_E1_HAU_v1; Name=Gsto_12G016690.1; organism=Gossypium stocksii; type=mRNA; length=1226bp; location=Sequence derived from: Chr12:27445824..27447049+ (Gossypium stocksiiback to top Coding sequence (CDS) from alignment at Chr12:27445824..27447049+ >Gsto_12G016690.1_E1_HAU_v1 ID=Gsto_12G016690.1_E1_HAU_v1; Name=Gsto_12G016690.1; organism=Gossypium stocksii; type=CDS; length=681bp; location=Sequence derived from: Chr12:27445824..27447049+ (Gossypium stocksiiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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