maker-Dt_10-snap-gene-50.683-mRNA-1

Transcript Overview
Namemaker-Dt_10-snap-gene-50.683-mRNA-1
Unique Namemaker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length900
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt10chromosomeDt10:47946084..47947394 -Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
awbarL0222Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
barbarL0248Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbarL0227Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbbarL0200Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
barbarL0935Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
awbarL0994Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
adbarL1046Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
barbarL1391Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barbarL1665Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barbarL1666Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barbarR1775Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barbarR1776Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbbarL0932Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbarL1716Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
bard3dR1690Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
bard3dR1721Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
awbarL1883Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awbarL1887Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
bard3dR1730Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
bard3dR1732Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
adbarL2143Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbarL2146Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbarL2290Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbbarL1536Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbbarL1934Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbbarL1935Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbbarL2066Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbarL3836Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbarL3839Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adbbarL3455Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbbarL3456Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
bard3kR1256Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
bard3kR1304Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
bard3kR1321Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
bard8iR1195Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
bard8iR1214Gossypium trilobum (D8) genome ISU_v1Gossypium trilobum
bard9iR1240Gossypium laxum (D9) genome ISU_v1Gossypium laxum
bard9iR1257Gossypium laxum (D9) genome ISU_v1Gossypium laxum
bardfiR1174Gossypium aridum (D4) genome ISU_v1Gossypium aridum
bard9iR1266Gossypium laxum (D9) genome ISU_v1Gossypium laxum
bardfiR1188Gossypium aridum (D4) genome ISU_v1Gossypium aridum
bardfiR1199Gossypium aridum (D4) genome ISU_v1Gossypium aridum
bardfiR1200Gossypium aridum (D4) genome ISU_v1Gossypium aridum
bardooR1266Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
bardooR1285Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
bardooR1296Gossypium schwendimanii (D11) genome ISU_v1 Gossypium schwendimanii
bardsiR1017Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
bardsiR1049Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
bardqiR1213Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
bardqiR1262Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
bardqiR1278Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
bardtoR1117Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
bardtoR1153Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
bardttR1177Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
bardttR1184Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
bardttR1185Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
bardttR1217Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
bargauR1357Gossypium australe (G2) genome CRI_v1.1Gossypium australe
bargauR1384Gossypium australe (G2) genome CRI_v1.1Gossypium australe
bargauR1413Gossypium australe (G2) genome CRI_v1.1Gossypium australe
bargauR1418Gossypium australe (G2) genome CRI_v1.1Gossypium australe
barfnR1601Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
barfnR1626Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
barfnR1680Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
barfnR1681Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
barganR1647Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
barganR1671Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
barganR1715Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
barghR1473Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1480Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1508Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1514Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1515Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1520Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
barghR1553Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
bargdR1817Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bargdR1848Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bargdR1860Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bargdR1861Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bargdR1870Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bargdR1905Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
barghtR1898Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
barghtR1902Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
barghtR1938Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
barghtR1958Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
barghtR1994Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
barghtR1997Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
bargkR1431Gossypioides kirkii genome ISU_v3Gossypioides kirkii
bargkR1478Gossypioides kirkii genome ISU_v3Gossypioides kirkii
bargkR1494Gossypioides kirkii genome ISU_v3Gossypioides kirkii
bargosR1666Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
bargosR1681Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
bargosR1734Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
bargosR1735Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
bargroR1872Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
bargroR1915Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
bargroR1922Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
bargrbR1579Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
bargrbR1599Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
bargrbR1649Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
bargrhR1665Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
bargrhR1685Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
barghzR1701Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
bargrhR1739Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
bargrhR1741Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
barghzR1744Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
barghzR1753Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
barghzR1760Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
barghzR1791Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
bargtiR1690Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
bargtiR1725Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
bargtiR1731Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
bargtiR1734Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
barhbR3076Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
barhbR3129Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
barhbR3164Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
bargtbR1657Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
bargtbR1677Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
bargtbR1733Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
bargtbR1734Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
barhwR1734Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
barhwR1765Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
barhwR1816Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
barhwR1817Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
barhgsR1628Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1665Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1673Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1674Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1681Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1715Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhgsR1717Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
barhnR2210Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2218Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2256Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2265Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2267Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2277Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhjR2080Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2088Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhnR2321Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhnR2325Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
barhjR2122Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2132Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2136Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2144Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2179Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
barhjR2182Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
bartoR1629Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1665Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1673Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1674Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1679Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1720Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
bartoR1722Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
barhzR1974Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR1981Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR2016Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR2027Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR2028Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR2038Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barhzR2073Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
barndmR2008Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2048Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2057Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2058Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2069Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2109Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barndmR2113Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
bartwR2014Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2024Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2053Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2063Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2065Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2076Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
bartwR2111Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
baruhR1589Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1596Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1623Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1632Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1634Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1641Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
baruhR1676Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
barjmbR2043Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2049Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2084Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2093Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2094Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2103Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barjmbR2142Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
barpscR2012Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2031Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2066Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2082Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2085Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2089Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
barpscR2135Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adybarL0236Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL0968Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL1576Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL1988Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL1990Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL2122Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL3553Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adybarL3555Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
barhpfR1903Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR1912Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR1961Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR1963Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR1968Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR2009Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
barhpfR2010Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
rna-gnl|WGS:VKDL|Gobar.A10G114900.3Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
maker-At_10-snap-gene-24.272-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
maker-Dt_10-snap-gene-50.683maker-Dt_10-snap-gene-50.683_NSF-Bar32_v1Gossypium hirsutumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
maker-Dt_10-snap-gene-50.683-mRNA-1maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1-proteinGossypium hirsutumpolypeptide
maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1Gossypium hirsutumpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-Dt_10-snap-gene-50.683-mRNA-1:cds_NSF-Bar32_v1maker-Dt_10-snap-gene-50.683-mRNA-1:cds_NSF-Bar32_v1Gossypium hirsutumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1780_NSF-Bar32_v1maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1780_NSF-Bar32_v1Gossypium hirsutumexon
maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1781_NSF-Bar32_v1maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1781_NSF-Bar32_v1Gossypium hirsutumexon
maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1782_NSF-Bar32_v1maker-Dt_10-snap-gene-50.683-mRNA-1:exon:1782_NSF-Bar32_v1Gossypium hirsutumexon


Homology
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_012453478.1| (PREDICTED: F-box protein At3g07870-like [Gossypium raimondii])

HSP 1 Score: 567 bits (1460), Expect = 0.000e+0
Identity = 277/309 (89.64%), Postives = 279/309 (90.29%), Query Frame = 0
Query:    1 MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISRF 287
            MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPT DISDISACNGL CLV PKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDF GLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI                      SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDK SSECTKTGVLGGCLFICHYPDFMQFDIW MKEYGVKESWTKQFV+KHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISY PCFVSLYNVAKGEQIS +
Sbjct:    1 MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTWDISDISACNGLLCLVGPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFWGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSIVNAPTDFVSLRFKAFLNGALHWSKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKSSSECTKTGVLGGCLFICHYPDFMQFDIWAMKEYGVKESWTKQFVVKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYAPCFVSLYNVAKGEQISSY 309          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: gb|MBA0629062.1| (hypothetical protein [Gossypium davidsonii] >gb|MBA0664739.1| hypothetical protein [Gossypium klotzschianum])

HSP 1 Score: 430.639 bits (1106), Expect = 6.265e-150
Identity = 224/307 (72.96%), Postives = 226/307 (73.62%), Query Frame = 0
Query:    1 MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQIS 285
            MYNNLEKSRKRLHLS+VY  GASVQVSKLNFTPKFKVPT DISDISACNGL CLV PKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDF GLSYSTVTNQYKLLQSYYPTDELNCPM EIYTIGSGTWRSI                      SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF                                                    DAI+YTPCFVSLYNVAKGEQIS
Sbjct:    1 MYNNLEKSRKRLHLSHVYVDGASVQVSKLNFTPKFKVPTWDISDISACNGLLCLVGPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFWGLSYSTVTNQYKLLQSYYPTDELNCPMAEIYTIGSGTWRSIVNAPTDFVSLRFKAFLNGALHWSKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF----------------------------------------------------DAIAYTPCFVSLYNVAKGEQIS 255          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: gb|MBA0725290.1| (hypothetical protein [Gossypium laxum])

HSP 1 Score: 375.555 bits (963), Expect = 3.135e-127
Identity = 194/291 (66.67%), Postives = 213/291 (73.20%), Query Frame = 0
Query:   28 KLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSISKSSL--------------------------RGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGS-----YQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISRF 287
            +   TPK  VPT DISDISACNGL CL+ PK+DDPFYV   CNPILGEFITIQPPYK+RCR  F GL YSTVTNQYKLL SYYP  E N PM EIYTIGS TWRSI   +                            GEFINSFD DTEQFGIVPPP HFQELDK  +E T TGVLG CLF+C++PDF++FDIWVMKEYGVKESWTKQFVIK +Y        YQP+LVLSNGEIFML N  + TCYNQK R++RGAKSF I S+FDAI+YTPC VSLYNVAKGEQIS +
Sbjct:    2 QTQLTPKSNVPTWDISDISACNGLLCLLGPKKDDPFYV---CNPILGEFITIQPPYKERCRSRFWGLGYSTVTNQYKLLHSYYPIVESNYPMAEIYTIGSRTWRSIGFGNAPTDLVSLPFNAFLNGALHWYNISFGGAGEFINSFDIDTEQFGIVPPPDHFQELDKVFTEYTTTGVLGDCLFVCYFPDFVEFDIWVMKEYGVKESWTKQFVIKDMYPKGYGWDIYQPMLVLSNGEIFMLLNNEEITCYNQKRRHMRGAKSFRIRSQFDAIAYTPCLVSLYNVAKGEQISWY 289          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: gb|KAB2009624.1| (hypothetical protein ES319_D10G180100v1 [Gossypium barbadense] >gb|TYG50674.1| hypothetical protein ES288_D10G194200v1 [Gossypium darwinii])

HSP 1 Score: 367.466 bits (942), Expect = 8.380e-124
Identity = 195/263 (74.14%), Postives = 201/263 (76.43%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYN 245
            L+K RKRL LS+VYA GAS QVSKLNFTPK  VPT DISDISACNGL CL+ PK+ DPFYVFYVCNPILGEFITIQPP K R R  F GL YSTVTNQ KLLQSYYPT +LN PM EIYTIGSGTWRSI                      SKS LRGEFINSFDFDTEQFGIVPPPHHFQELDK SS CTKTGVLGGCLFIC               YGVKESWTKQFVIKHVYSGSYQP+LVLSNGEIFMLSNYPK TCYN
Sbjct:   83 LQKCRKRLQLSHVYAGGASFQVSKLNFTPKSNVPTWDISDISACNGLLCLLGPKKGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFSGLGYSTVTNQCKLLQSYYPTVKLNYPMAEIYTIGSGTWRSIGNAPTDYVSLPFNAFLNGAHHWSKSFLRGEFINSFDFDTEQFGIVPPPHHFQELDKYSSGCTKTGVLGGCLFIC--------------PYGVKESWTKQFVIKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYN 331          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: gb|KAG4126537.1| (hypothetical protein ERO13_D10G162364v2 [Gossypium hirsutum])

HSP 1 Score: 366.696 bits (940), Expect = 1.579e-123
Identity = 194/263 (73.76%), Postives = 201/263 (76.43%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYN 245
            L+K RKRL LS+VYA GAS QVSKLNFTPK  VPT DISDISACNGL CL+ PK+ DPFYVFYVCNPILGEFITIQPP K R R  F GL YSTVTNQ KLLQSYYPT +LN PM EIYTIGSGTWRSI                      SKS LRGEFINSFDFDTEQFGI+PPPHHFQELDK SS CTKTGVLGGCLFIC               YGVKESWTKQFVIKHVYSGSYQP+LVLSNGEIFMLSNYPK TCYN
Sbjct:   83 LQKCRKRLQLSHVYAGGASFQVSKLNFTPKSNVPTWDISDISACNGLLCLLGPKKGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFSGLGYSTVTNQCKLLQSYYPTVKLNYPMAEIYTIGSGTWRSIGNAPTDYVSLPFNAFLNGAHHWSKSFLRGEFINSFDFDTEQFGIIPPPHHFQELDKYSSGCTKTGVLGGCLFIC--------------PYGVKESWTKQFVIKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYN 331          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_017643114.1| (PREDICTED: F-box protein At3g07870-like isoform X2 [Gossypium arboreum])

HSP 1 Score: 354.755 bits (909), Expect = 1.639e-119
Identity = 191/280 (68.21%), Postives = 204/280 (72.86%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF----------VSLYNVAKG-EQISRFICKK--LDDLIHE 298
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF             Y   +G E ++R + +   + DLIHE
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCFSLQCCKRRANFQFYVGCRGPESMTRSVNEHIYMQDLIHE 283          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_017643127.1| (PREDICTED: F-box protein At3g07870-like isoform X4 [Gossypium arboreum] >ref|XP_017643134.1| PREDICTED: F-box protein At3g07870-like isoform X4 [Gossypium arboreum] >ref|XP_017643142.1| PREDICTED: F-box protein At3g07870-like isoform X4 [Gossypium arboreum])

HSP 1 Score: 353.214 bits (905), Expect = 3.773e-119
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_017643105.1| (PREDICTED: F-box protein At3g07870-like isoform X1 [Gossypium arboreum])

HSP 1 Score: 353.599 bits (906), Expect = 6.831e-119
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_017643122.1| (PREDICTED: F-box protein At3g07870-like isoform X3 [Gossypium arboreum])

HSP 1 Score: 352.058 bits (902), Expect = 1.793e-118
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Match: ref|XP_039048677.1| (F-box protein At3g07870-like [Hibiscus syriacus] >ref|XP_039048678.1| F-box protein At3g07870-like [Hibiscus syriacus] >gb|KAE8660100.1| F-box and associated interaction domains-containing protein [Hibiscus syriacus])

HSP 1 Score: 345.51 bits (885), Expect = 3.640e-114
Identity = 183/308 (59.42%), Postives = 211/308 (68.51%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSISKS-----------------------SLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVY---SGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISR 286
             +KSRK+L LS+V A G   QVS+LNFTP   VPT DISDISACNGL CLV PK+ DPFYV   CNPILGEF TIQ PYKD  R    GL YSTVTNQYKLLQSY+PT E       IYT+G+GTWRSI  +                          GEFI+SF FDTEQFG VPPP HF ELD   +ECT +GVLG  LFI ++ ++ Q DIWVMKEYGVKESWTKQFVI+ ++   SG Y+P++VL NGEIF+L N     CY+QK + + G K F I S  DAI+YTPCFVSLYNVAKGEQ+SR
Sbjct:   75 FQKSRKKLQLSHVDAKGEGFQVSQLNFTPISNVPTWDISDISACNGLLCLVGPKKGDPFYV---CNPILGEFFTIQQPYKDSLRDRCWGLGYSTVTNQYKLLQSYFPTVESTGKTARIYTVGTGTWRSIGNALNHPIALPFNAFLNGALHFRNYLPRVGEFIHSFHFDTEQFGTVPPPDHFLELDNFDAECTTSGVLGDWLFITYFSNYRQIDIWVMKEYGVKESWTKQFVIRDIFPYGSGYYEPMVVLRNGEIFLLLNTQTIVCYSQKRKQIGGTKFFKIRSLLDAIAYTPCFVSLYNVAKGEQVSR 379          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8VQL2_9ROSI (FBA_1 domain-containing protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_004700 PE=4 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 3.014e-150
Identity = 224/307 (72.96%), Postives = 226/307 (73.62%), Query Frame = 0
Query:    1 MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQIS 285
            MYNNLEKSRKRLHLS+VY  GASVQVSKLNFTPKFKVPT DISDISACNGL CLV PKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDF GLSYSTVTNQYKLLQSYYPTDELNCPM EIYTIGSGTWRSI                      SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF                                                    DAI+YTPCFVSLYNVAKGEQIS
Sbjct:    1 MYNNLEKSRKRLHLSHVYVDGASVQVSKLNFTPKFKVPTWDISDISACNGLLCLVGPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFWGLSYSTVTNQYKLLQSYYPTDELNCPMAEIYTIGSGTWRSIVNAPTDFVSLRFKAFLNGALHWSKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF----------------------------------------------------DAIAYTPCFVSLYNVAKGEQIS 255          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J8SU52_GOSDV (FBA_1 domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_023676 PE=4 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 3.014e-150
Identity = 224/307 (72.96%), Postives = 226/307 (73.62%), Query Frame = 0
Query:    1 MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQIS 285
            MYNNLEKSRKRLHLS+VY  GASVQVSKLNFTPKFKVPT DISDISACNGL CLV PKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDF GLSYSTVTNQYKLLQSYYPTDELNCPM EIYTIGSGTWRSI                      SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF                                                    DAI+YTPCFVSLYNVAKGEQIS
Sbjct:    1 MYNNLEKSRKRLHLSHVYVDGASVQVSKLNFTPKFKVPTWDISDISACNGLLCLVGPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFWGLSYSTVTNQYKLLQSYYPTDELNCPMAEIYTIGSGTWRSIVNAPTDFVSLRFKAFLNGALHWSKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQF----------------------------------------------------DAIAYTPCFVSLYNVAKGEQIS 255          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A7J9AMX0_9ROSI (FBA_1 domain-containing protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_021886 PE=4 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.508e-127
Identity = 194/291 (66.67%), Postives = 213/291 (73.20%), Query Frame = 0
Query:   28 KLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSISKSSL--------------------------RGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGS-----YQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISRF 287
            +   TPK  VPT DISDISACNGL CL+ PK+DDPFYV   CNPILGEFITIQPPYK+RCR  F GL YSTVTNQYKLL SYYP  E N PM EIYTIGS TWRSI   +                            GEFINSFD DTEQFGIVPPP HFQELDK  +E T TGVLG CLF+C++PDF++FDIWVMKEYGVKESWTKQFVIK +Y        YQP+LVLSNGEIFML N  + TCYNQK R++RGAKSF I S+FDAI+YTPC VSLYNVAKGEQIS +
Sbjct:    2 QTQLTPKSNVPTWDISDISACNGLLCLLGPKKDDPFYV---CNPILGEFITIQPPYKERCRSRFWGLGYSTVTNQYKLLHSYYPIVESNYPMAEIYTIGSRTWRSIGFGNAPTDLVSLPFNAFLNGALHWYNISFGGAGEFINSFDIDTEQFGIVPPPDHFQELDKVFTEYTTTGVLGDCLFVCYFPDFVEFDIWVMKEYGVKESWTKQFVIKDMYPKGYGWDIYQPMLVLSNGEIFMLLNNEEITCYNQKRRHMRGAKSFRIRSQFDAIAYTPCLVSLYNVAKGEQISWY 289          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5D2B050_GOSDA (F-box domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_D10G194200v1 PE=4 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.031e-124
Identity = 195/263 (74.14%), Postives = 201/263 (76.43%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYN 245
            L+K RKRL LS+VYA GAS QVSKLNFTPK  VPT DISDISACNGL CL+ PK+ DPFYVFYVCNPILGEFITIQPP K R R  F GL YSTVTNQ KLLQSYYPT +LN PM EIYTIGSGTWRSI                      SKS LRGEFINSFDFDTEQFGIVPPPHHFQELDK SS CTKTGVLGGCLFIC               YGVKESWTKQFVIKHVYSGSYQP+LVLSNGEIFMLSNYPK TCYN
Sbjct:   83 LQKCRKRLQLSHVYAGGASFQVSKLNFTPKSNVPTWDISDISACNGLLCLLGPKKGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFSGLGYSTVTNQCKLLQSYYPTVKLNYPMAEIYTIGSGTWRSIGNAPTDYVSLPFNAFLNGAHHWSKSFLRGEFINSFDFDTEQFGIVPPPHHFQELDKYSSGCTKTGVLGGCLFIC--------------PYGVKESWTKQFVIKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYN 331          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A5J5PTA8_GOSBA (F-box domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D10G180100v1 PE=4 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.031e-124
Identity = 195/263 (74.14%), Postives = 201/263 (76.43%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYN 245
            L+K RKRL LS+VYA GAS QVSKLNFTPK  VPT DISDISACNGL CL+ PK+ DPFYVFYVCNPILGEFITIQPP K R R  F GL YSTVTNQ KLLQSYYPT +LN PM EIYTIGSGTWRSI                      SKS LRGEFINSFDFDTEQFGIVPPPHHFQELDK SS CTKTGVLGGCLFIC               YGVKESWTKQFVIKHVYSGSYQP+LVLSNGEIFMLSNYPK TCYN
Sbjct:   83 LQKCRKRLQLSHVYAGGASFQVSKLNFTPKSNVPTWDISDISACNGLLCLLGPKKGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFSGLGYSTVTNQCKLLQSYYPTVKLNYPMAEIYTIGSGTWRSIGNAPTDYVSLPFNAFLNGAHHWSKSFLRGEFINSFDFDTEQFGIVPPPHHFQELDKYSSGCTKTGVLGGCLFIC--------------PYGVKESWTKQFVIKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYN 331          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P4NU35_GOSAR (F-box protein At3g07870-like isoform X2 OS=Gossypium arboreum OX=29729 GN=LOC108484011 PE=4 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 7.883e-120
Identity = 191/280 (68.21%), Postives = 204/280 (72.86%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF----------VSLYNVAKG-EQISRFICKK--LDDLIHE 298
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF             Y   +G E ++R + +   + DLIHE
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCFSLQCCKRRANFQFYVGCRGPESMTRSVNEHIYMQDLIHE 283          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P4Q095_GOSAR (F-box protein At3g07870-like isoform X4 OS=Gossypium arboreum OX=29729 GN=LOC108484011 PE=4 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.815e-119
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P4QF75_GOSAR (F-box protein At3g07870-like isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108484011 PE=4 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 3.286e-119
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6P4Q084_GOSAR (F-box protein At3g07870-like isoform X3 OS=Gossypium arboreum OX=29729 GN=LOC108484011 PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 8.623e-119
Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
Query:   54 LVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSI----------------------SKSSLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCF 272
             + PK  DPFYVFYVCNPILGEFITIQPP K R R  F G+ YSTVTNQYKLLQSYYPT +LN PM EI   GSGTWRSI                      SK SLRGEFIN FDFDTEQFGIVPPPHHFQELD+ SS CTKTGVLGGCLFICH PDFMQFDIWVMKEYGVKESWTKQFV+KHVYSGSYQP+LVLSNGEIFMLSNYPK TCYNQKG Y+RGAKSF I  KF AISY  CF
Sbjct:    7 FLGPKIGDPFYVFYVCNPILGEFITIQPPCKGRHRSPFWGIGYSTVTNQYKLLQSYYPTVKLNYPMAEI---GSGTWRSIGNAPTDFVSLPFNAFLNGGLHWSKFSLRGEFINFFDFDTEQFGIVPPPHHFQELDRYSSGCTKTGVLGGCLFICHCPDFMQFDIWVMKEYGVKESWTKQFVLKHVYSGSYQPMLVLSNGEIFMLSNYPKITCYNQKGIYMRGAKSFRIRLKFHAISYMLCF 244          
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Match: A0A6A2WXB7_HIBSY (F-box and associated interaction domains-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116958pilonHSYRG00075 PE=4 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.751e-114
Identity = 183/308 (59.42%), Postives = 211/308 (68.51%), Query Frame = 0
Query:    5 LEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNGLHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVTNQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSISKS-----------------------SLRGEFINSFDFDTEQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKEYGVKESWTKQFVIKHVY---SGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRYLRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISR 286
             +KSRK+L LS+V A G   QVS+LNFTP   VPT DISDISACNGL CLV PK+ DPFYV   CNPILGEF TIQ PYKD  R    GL YSTVTNQYKLLQSY+PT E       IYT+G+GTWRSI  +                          GEFI+SF FDTEQFG VPPP HF ELD   +ECT +GVLG  LFI ++ ++ Q DIWVMKEYGVKESWTKQFVI+ ++   SG Y+P++VL NGEIF+L N     CY+QK + + G K F I S  DAI+YTPCFVSLYNVAKGEQ+SR
Sbjct:   75 FQKSRKKLQLSHVDAKGEGFQVSQLNFTPISNVPTWDISDISACNGLLCLVGPKKGDPFYV---CNPILGEFFTIQQPYKDSLRDRCWGLGYSTVTNQYKLLQSYFPTVESTGKTARIYTVGTGTWRSIGNALNHPIALPFNAFLNGALHFRNYLPRVGEFIHSFHFDTEQFGTVPPPDHFLELDNFDAECTTSGVLGDWLFITYFSNYRQIDIWVMKEYGVKESWTKQFVIRDIFPYGSGYYEPMVVLRNGEIFLLLNTQTIVCYSQKRKQIGGTKFFKIRSLLDAIAYTPCFVSLYNVAKGEQVSR 379          
The following BLAST results are available for this feature:
BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. NCBI nr
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
ref|XP_012453478.1|0.000e+089.64PREDICTED: F-box protein At3g07870-like [Gossypium... [more]
gb|MBA0629062.1|6.265e-15072.96hypothetical protein [Gossypium davidsonii] >gb|MB... [more]
gb|MBA0725290.1|3.135e-12766.67hypothetical protein [Gossypium laxum][more]
gb|KAB2009624.1|8.380e-12474.14hypothetical protein ES319_D10G180100v1 [Gossypium... [more]
gb|KAG4126537.1|1.579e-12373.76hypothetical protein ERO13_D10G162364v2 [Gossypium... [more]
ref|XP_017643114.1|1.639e-11968.21PREDICTED: F-box protein At3g07870-like isoform X2... [more]
ref|XP_017643127.1|3.773e-11975.52PREDICTED: F-box protein At3g07870-like isoform X4... [more]
ref|XP_017643105.1|6.831e-11975.52PREDICTED: F-box protein At3g07870-like isoform X1... [more]
ref|XP_017643122.1|1.793e-11875.52PREDICTED: F-box protein At3g07870-like isoform X3... [more]
ref|XP_039048677.1|3.640e-11459.42F-box protein At3g07870-like [Hibiscus syriacus] >... [more]
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BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A7J8VQL2_9ROSI3.014e-15072.96FBA_1 domain-containing protein OS=Gossypium klotz... [more]
A0A7J8SU52_GOSDV3.014e-15072.96FBA_1 domain-containing protein OS=Gossypium david... [more]
A0A7J9AMX0_9ROSI1.508e-12766.67FBA_1 domain-containing protein (Fragment) OS=Goss... [more]
A0A5D2B050_GOSDA4.031e-12474.14F-box domain-containing protein OS=Gossypium darwi... [more]
A0A5J5PTA8_GOSBA4.031e-12474.14F-box domain-containing protein OS=Gossypium barba... [more]
A0A6P4NU35_GOSAR7.883e-12068.21F-box protein At3g07870-like isoform X2 OS=Gossypi... [more]
A0A6P4Q095_GOSAR1.815e-11975.52F-box protein At3g07870-like isoform X4 OS=Gossypi... [more]
A0A6P4QF75_GOSAR3.286e-11975.52F-box protein At3g07870-like isoform X1 OS=Gossypi... [more]
A0A6P4Q084_GOSAR8.623e-11975.52F-box protein At3g07870-like isoform X3 OS=Gossypi... [more]
A0A6A2WXB7_HIBSY1.751e-11459.42F-box and associated interaction domains-containin... [more]
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BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of maker-Dt_10-snap-gene-50.683-mRNA-1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan Analysis for NSF v1.0 Gossypium hirsutum (AD1) 'Bar32' proteins
Date Performed: 2022-08-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006527F-box associated domain, type 1PFAMPF07734FBA_1coord: 130..214
e-value: 2.3E-6
score: 27.6
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 46..135
e-value: 2.4E-10
score: 38.1
NoneNo IPR availablePANTHERPTHR31790:SF298SUBFAMILY NOT NAMEDcoord: 38..135
coord: 137..284
NoneNo IPR availablePANTHERPTHR31790OS02G0783600 PROTEINcoord: 38..135
coord: 137..284

Sequences
The following sequences are available for this feature:

mRNA sequence

>maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_10-snap-gene-50.683-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=900bp
ATGTATAATAATCTTGAAAAATCTCGAAAGAGGCTTCATTTATCCTATGT
TTATGCTTATGGTGCAAGTGTCCAGGTCTCCAAACTCAACTTTACACCCA
AATTTAAAGTACCCACTTCGGATATTTCTGATATTAGTGCATGCAATGGT
TTGCATTGTTTAGTTGCACCCAAAAGAGATGACCCTTTCTATGTGTTCTA
CGTGTGTAACCCAATTTTGGGTGAATTTATCACAATTCAACCACCTTATA
AGGATAGGTGTAGGGGTGATTTTTTGGGGCTTAGTTATTCAACTGTCACT
AATCAATACAAACTTTTGCAAAGCTATTATCCTACAGATGAATTGAATTG
CCCAATGGTTGAAATATACACCATTGGGAGTGGTACATGGAGAAGCATAT
CGAAATCTTCTCTTCGTGGTGAATTCATAAATTCTTTTGACTTTGATACT
GAGCAGTTTGGGATAGTTCCACCGCCTCATCATTTTCAAGAATTGGATAA
GTGTTCTTCAGAATGCACAAAGACTGGAGTGCTAGGAGGTTGTCTGTTTA
TATGTCACTATCCAGATTTCATGCAATTTGACATTTGGGTTATGAAGGAA
TATGGTGTCAAGGAGTCTTGGACCAAACAATTTGTCATTAAACATGTTTA
CTCGGGTTCCTATCAACCAATACTTGTTTTGAGCAATGGAGAAATATTCA
TGTTGTCAAATTACCCGAAAAGAACTTGTTACAACCAGAAGGGGAGATAT
TTACGAGGAGCTAAATCCTTCTGGATTCCCTCAAAATTTGATGCAATTTC
TTATACCCCATGCTTTGTTTCTCTCTACAATGTTGCAAAAGGAGAGCAAA
TATCCAGATTTATATGCAAGAAACTCGACGATCTGATACATGAAAAGTAA
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protein sequence of maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1

>maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1; organism=Gossypium hirsutum; type=polypeptide; length=299bp
MYNNLEKSRKRLHLSYVYAYGASVQVSKLNFTPKFKVPTSDISDISACNG
LHCLVAPKRDDPFYVFYVCNPILGEFITIQPPYKDRCRGDFLGLSYSTVT
NQYKLLQSYYPTDELNCPMVEIYTIGSGTWRSISKSSLRGEFINSFDFDT
EQFGIVPPPHHFQELDKCSSECTKTGVLGGCLFICHYPDFMQFDIWVMKE
YGVKESWTKQFVIKHVYSGSYQPILVLSNGEIFMLSNYPKRTCYNQKGRY
LRGAKSFWIPSKFDAISYTPCFVSLYNVAKGEQISRFICKKLDDLIHEK
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mRNA from alignment at Dt10:47946084..47947394-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_10-snap-gene-50.683-mRNA-1; organism=Gossypium hirsutum; type=mRNA; length=1311bp; location=Sequence derived from: Dt10:47946084..47947394- (Gossypium hirsutum
ATGTATAATAATCTTGAAAAATCTCGAAAGAGGCTTCATTTATCCTATGT TTATGCTTATGGTGCAAGTGTCCAGGTCTCCAAACTCAACTTTACACCCA AATTTAAAGTACCCACTTCGGATATTTCTGATATTAGTGCATGCAATGGT TTGCATTGTTTAGTTGCACCCAAAAGAGATGACCCTTTCTATGTGTTCTA CGTGTGTAACCCAATTTTGGGTGAATTTATCACAATTCAACCACCTTATA AGGATAGGTGTAGGGGTGATTTTTTGGGGCTTAGTTATTCAACTGTCACT AATCAATACAAACTTTTGCAAAGCTATTATCCTACAGATGAATTGAATTG CCCAATGGTTGAAATATACACCATTGGGAGTGGTACATGGAGAAGCATAG TAAATGCACCTACTGACTTTGTTTCTTTACGTTTCAAAGCTTTCTTGAAT GGAGCCCTTCACTAGTCGAAATCTTCTCTTCGTGGTGAATTCATAAATTC TTTTGACTTTGATACTGAGCAGTTTGGGATAGTTCCACCGCCTCATCATT TTCAAGAATTGGATAAGTGTTCTTCAGAATGCACAAAGACTGGAGTGCTA GGAGGTTGTCTGTTTATATGTCACTATCCAGATTTCATGCAATTTGACAT TTGGGTTATGAAGGAATATGGTGTCAAGGAGTCTTGGACCAAACAATTTG TCATTAAACATGTTTACTCGGGTTCCTATCAACCAATACTTGTTTTGAGC AATGGAGAAATATTCATGTTGTCAAATTACCCGAAAAGAACTTGTTACAA CCAGAAGGGGAGATATTTACGAGGAGCTAAATCCTTCTGGATTCCCTCAA AATTTGATGCAATTTCTTATACCCCATGCTTTGTTTCTCTCTACAATGTT GCAAAAGGAGAGCAAATATCCAGGTATTATATCATAATCGTAGCGATGCA CCTTATTAATAGGATTAGAGTGCGAGTTCAAAATTTTCTTTCATCACCTA CAGCTTGAAGATAATGCTTTTGATGCCATTTTAGTGAACTTTTGATTTCC GTTTCCATGTACAAATTACTGAGTTCTGTTTCATTGTATCATGGTTTTTA TTTAATAAGCTGAAAATGTTTATGTAGGATGTAGAGGACCAGAGTCTATG ACAAATCTGTAAATGAACATGCGAGTTTTTATTCTTTTTTCGAGTTTATA CATGTCTCCCATTCAATATGCATCGGTTTGTGATTTAATAATACATGAAA AGTAAAGTTTTCATGTAGATTTATATGCAAGAAACTCGACGATCTGATAC ATGAAAAGTAA
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Coding sequence (CDS) from alignment at Dt10:47946084..47947394-

>maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1 ID=maker-Dt_10-snap-gene-50.683-mRNA-1_NSF-Bar32_v1; Name=maker-Dt_10-snap-gene-50.683-mRNA-1; organism=Gossypium hirsutum; type=CDS; length=900bp; location=Sequence derived from: Dt10:47946084..47947394- (Gossypium hirsutum
ATGTATAATAATCTTGAAAAATCTCGAAAGAGGCTTCATTTATCCTATGT
TTATGCTTATGGTGCAAGTGTCCAGGTCTCCAAACTCAACTTTACACCCA
AATTTAAAGTACCCACTTCGGATATTTCTGATATTAGTGCATGCAATGGT
TTGCATTGTTTAGTTGCACCCAAAAGAGATGACCCTTTCTATGTGTTCTA
CGTGTGTAACCCAATTTTGGGTGAATTTATCACAATTCAACCACCTTATA
AGGATAGGTGTAGGGGTGATTTTTTGGGGCTTAGTTATTCAACTGTCACT
AATCAATACAAACTTTTGCAAAGCTATTATCCTACAGATGAATTGAATTG
CCCAATGGTTGAAATATACACCATTGGGAGTGGTACATGGAGAAGCATAT
CGAAATCTTCTCTTCGTGGTGAATTCATAAATTCTTTTGACTTTGATACT
GAGCAGTTTGGGATAGTTCCACCGCCTCATCATTTTCAAGAATTGGATAA
GTGTTCTTCAGAATGCACAAAGACTGGAGTGCTAGGAGGTTGTCTGTTTA
TATGTCACTATCCAGATTTCATGCAATTTGACATTTGGGTTATGAAGGAA
TATGGTGTCAAGGAGTCTTGGACCAAACAATTTGTCATTAAACATGTTTA
CTCGGGTTCCTATCAACCAATACTTGTTTTGAGCAATGGAGAAATATTCA
TGTTGTCAAATTACCCGAAAAGAACTTGTTACAACCAGAAGGGGAGATAT
TTACGAGGAGCTAAATCCTTCTGGATTCCCTCAAAATTTGATGCAATTTC
TTATACCCCATGCTTTGTTTCTCTCTACAATGTTGCAAAAGGAGAGCAAA
TATCCAGATTTATATGCAAGAAACTCGACGATCTGATACATGAAAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006527F-box-assoc_dom_typ1
IPR017451F-box-assoc_interact_dom