Homology
BLAST of EVM0031369.1 vs.
Match:
AT5G08040.1 (| mitochondrial import receptor subunit TOM5-like protein | Chr5:2577358-2578073 REVERSE LENGTH=54 | 201606)
HSP 1 Score: 44.2838 bits (103), Expect = 4.765e-8
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWGIIKMRN 49
M N++ S++K+KA WH +VHDE+ WA NM+ AL + G++ MR+
Sbjct: 1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAG--GVVLMRS 47
BLAST of EVM0031369.1 vs.
Match:
AT5G08040.1 (| mitochondrial import receptor subunit TOM5-like protein | Chr5:2577358-2578073 REVERSE LENGTH=54 | 201606)
HSP 1 Score: 44.2838 bits (103), Expect = 4.765e-8
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWGIIKMRN 49
M N++ S++K+KA WH +VHDE+ WA NM+ AL + G++ MR+
Sbjct: 1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAG--GVVLMRS 47
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5D2YI76|A0A5D2YI76_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G076900v1 PE=4 SV=1)
HSP 1 Score: 59.3066 bits (142), Expect = 1.325e-10
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNM 29
MANSM SLDKLKAFWH QVHDEENWARNM
Sbjct: 1 MANSMVSLDKLKAFWHSQVHDEENWARNM 29
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5D2FTB1|A0A5D2FTB1_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A07G079700v1 PE=4 SV=1)
HSP 1 Score: 57.7658 bits (138), Expect = 5.583e-10
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNM 29
MANSM SLD LKAFWH QVHDEENWARNM
Sbjct: 1 MANSMVSLDTLKAFWHSQVHDEENWARNM 29
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5J5V0S7|A0A5J5V0S7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G076100v1 PE=4 SV=1)
HSP 1 Score: 57.7658 bits (138), Expect = 5.583e-10
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNM 29
MANSM SLD LKAFWH QVHDEENWARNM
Sbjct: 1 MANSMVSLDTLKAFWHSQVHDEENWARNM 29
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5D2PTR0|A0A5D2PTR0_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G079300v1 PE=4 SV=1)
HSP 1 Score: 57.7658 bits (138), Expect = 5.583e-10
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNM 29
MANSM SLD LKAFWH QVHDEENWARNM
Sbjct: 1 MANSMVSLDTLKAFWHSQVHDEENWARNM 29
BLAST of EVM0031369.1 vs.
Match:
tr|A0A1U8P8Y1|A0A1U8P8Y1_GOSHI (mitochondrial import receptor subunit TOM5 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107956549 PE=4 SV=1)
HSP 1 Score: 54.6842 bits (130), Expect = 8.790e-9
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMR 30
MANSM SLDKLKAFW QVHDEE WARNM+
Sbjct: 1 MANSMVSLDKLKAFWLSQVHDEEKWARNMK 30
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5D2VLR3|A0A5D2VLR3_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D03G111000v1 PE=4 SV=1)
HSP 1 Score: 51.2174 bits (121), Expect = 2.698e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWG-IIKMRN 49
MA+++ SLDKLKAFW+ QVHDEENWA NM+ LR G I+ MRN
Sbjct: 1 MADTVISLDKLKAFWNSQVHDEENWAHNMK---LLRAAGLFAGSILLMRN 47
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5D2D3S9|A0A5D2D3S9_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D03G126400v1 PE=4 SV=1)
HSP 1 Score: 51.2174 bits (121), Expect = 2.698e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWG-IIKMRN 49
MA+++ SLDKLKAFW+ QVHDEENWA NM+ LR G I+ MRN
Sbjct: 1 MADTVISLDKLKAFWNSQVHDEENWAHNMK---LLRAAGLFAGSILLMRN 47
BLAST of EVM0031369.1 vs.
Match:
tr|A0A5J5S398|A0A5J5S398_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D03G116300v1 PE=4 SV=1)
HSP 1 Score: 51.2174 bits (121), Expect = 2.698e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWG-IIKMRN 49
MA+++ SLDKLKAFW+ QVHDEENWA NM+ LR G I+ MRN
Sbjct: 1 MADTVISLDKLKAFWNSQVHDEENWAHNMK---LLRAAGLFAGSILLMRN 47
BLAST of EVM0031369.1 vs.
Match:
tr|A0A0D2QIC2|A0A0D2QIC2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G101600 PE=4 SV=1)
HSP 1 Score: 51.2174 bits (121), Expect = 2.698e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWG-IIKMRN 49
MA+++ SLDKLKAFW+ QVHDEENWA NM+ LR G I+ MRN
Sbjct: 1 MADTVISLDKLKAFWNSQVHDEENWAHNMK---LLRAAGLFAGSILLMRN 47
BLAST of EVM0031369.1 vs.
Match:
tr|A0A1U8NLY5|A0A1U8NLY5_GOSHI (mitochondrial import receptor subunit TOM5 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107949784 PE=4 SV=1)
HSP 1 Score: 51.2174 bits (121), Expect = 2.698e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWG-IIKMRN 49
MA+++ SLDKLKAFW+ QVHDEENWA NM+ LR G I+ MRN
Sbjct: 1 MADTVISLDKLKAFWNSQVHDEENWAHNMK---LLRAAGLFAGSILLMRN 47
The following BLAST results are available for this feature:
Sequences
The
following sequences are available for this feature:
mRNA sequence
>EVM0031369.1_D1_CRI_v1 ID=EVM0031369.1_D1_CRI_v1; Name=EVM0031369.1; organism=Gossypium thurberi; type=mRNA; length=153bp
ATGGCAAACTCCATGGCCTCTCTCGATAAGCTCAAAGCCTTCTGGCATTA
TCAAGTCCACGATGAGGAAAACTGGGCTCGGAACATGAGAGAAAATAATG
CCTTAAGGATAGAATGGAAAATGTGGGGGATAATCAAAATGAGAAATGGT
TAG
back to topprotein sequence of EVM0031369.1_D1_CRI_v1
>EVM0031369.1_D1_CRI_v1 ID=EVM0031369.1_D1_CRI_v1; Name=EVM0031369.1_D1_CRI_v1; organism=Gossypium thurberi; type=polypeptide; length=51bp
MANSMASLDKLKAFWHYQVHDEENWARNMRENNALRIEWKMWGIIKMRNG
.
back to topmRNA from alignment at Chr01:8185250..8186612+
Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EVM0031369.1_D1_CRI_v1 ID=EVM0031369.1_D1_CRI_v1; Name=EVM0031369.1; organism=Gossypium thurberi; type=mRNA; length=1363bp; location=Sequence derived from: Chr01:8185250..8186612+ (Gossypium thurberi
ATGGCAAACTCCATGGCCTCTCTCGATAAGCTCAAAGCCTTCTGGCATTA
TCAAGTCCACGATGAGGAAAACTGGGCTCGGAACATGGTATTTCATTTTT
CTTTATTTATCTTTTATGCTCTTCCTTTCATAGTTTTCACTTTTTTCTGG
GTTTTTCCTTTCATTAAGTCGTGATTTAATTCGATTTTGATTATGCATTT
GTTTTTCTGACATTTGGGTTTCTGGGAATTTGTTTAGAGAATAGGTATTT
ACTCCACTGATTTAAAAAATGAAAGAAGAAAACCAATGATTTGATTTGGT
AGAATTGAACATGTTAGCAACTAGGATAAAGATAACATATCCAGAACTTA
TAGTTGGAACAAGGCATTTTGAAAGTTATTCAATGTCTGGAATTTCTCAT
CATTGGGACCTTGAAATATATATGTCATGAATCTCCGTATGATTGAATTG
ATATGATGTAATTCAACTGTTGTTAGTTGACTATATAAATCTACCTGTTA
ATATGGTACCTTAATTCTTAACTGAAATCATGGGTCGAATAGTGTTCCTC
AAATGTGCGAATAGTTAGAAAAACACCCACATATGCATAACAGCAACACA
CAACAACTGGAGAAACTAATGCAGCCTTCTAGAGTCAATAGAAATCTTTA
TCCGTGACCCATATGAAAGAAGTTTATCTGACGATAACTAATGCATTGAC
TTGTTTGGTTTGTTGTTTACATAATTTACTCTAGTTTCTTTTATTGGGAC
TAGTAATGGTTTTCGTGGCCAACTTATATATCGGTTTCATATGATTTCTG
GCTCCATTAGCTTTGGTGGACACTTTCTTTGTAAGTAAGATAGTGTTGTG
CGGAAGCGTGTAAAAGAGTAAAATTATTGTACTGAAAAATCACACTAAGG
GTGGGTTTGGATGGGCGATTGGGTGCGGTGCGGTGCGTTTAGCTTACTTT
TTGTCTCACGCTACAGTATCACTACAGTATCTAATCTCACCGCCACCGTT
GTTTTTACACTAACCGCAGGTAAACGCACCGCCCATCCAAACTCACCCTA
AGTTCAATTCCCAGGAAAGAGAGGTGGATCACGTGGATCACTTAAGTACC
AGGTCTTTCCAAGCCAGAATATCCCTCTATCGTAATTTAATCGCATAATA
AATCACTACAATCACTCTCACAAAATATGCAAAATAAACAATAAAGAACA
CAAGAATTTTAACGAGGTTCAACAAATTCTGCTTACGTCCTCGGGCACTA
ACAAATATATTTCACTCTAAAATACAAGTGAAAATTTACAAATAAAGAGA
GAAAATAATGCCTTAAGGATAGAATGGAAAATGTGGGGGATAATCAAAAT
GAGAAATGGTTAG
back to topCoding sequence (CDS) from alignment at Chr01:8185250..8186612+
>EVM0031369.1_D1_CRI_v1 ID=EVM0031369.1_D1_CRI_v1; Name=EVM0031369.1; organism=Gossypium thurberi; type=CDS; length=153bp; location=Sequence derived from: Chr01:8185250..8186612+ (Gossypium thurberi
ATGGCAAACTCCATGGCCTCTCTCGATAAGCTCAAAGCCTTCTGGCATTA
TCAAGTCCACGATGAGGAAAACTGGGCTCGGAACATGAGAGAAAATAATG
CCTTAAGGATAGAATGGAAAATGTGGGGGATAATCAAAATGAGAAATGGT
TAG
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