Ghi_D03G00381

Transcript Overview
NameGhi_D03G00381
Unique NameGhi_D03G00381_WHU-TM1_v1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length3702
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:542210..548570 -Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gossypium hirsutum (AD1) 'TM-1' genome WHU_v12020-04-04
InterProScan Analysis for WHU_v1_a1 Gossypium hirsutum proteins2020-04-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
gdtwL0330Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL0329Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL1107Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL1076Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL1662Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL1603Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL2395Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL2295Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
hwtwL0350Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwtwL0870Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
gautwL0300Gossypium australe (G2) genome CRI_v1.1Gossypium australe
fntwL0339Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gbtwL0331Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
dttwL0269Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
gautwL0827Gossypium australe (G2) genome CRI_v1.1Gossypium australe
fntwL0829Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gautwL0950Gossypium australe (G2) genome CRI_v1.1Gossypium australe
bhtwL0503Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhtwL0506Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
dttwL0707Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
gbtwL1128Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL1851Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbtwL1684Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL2513Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbtwL2406Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL3772Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhtwL3778Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
abtwL2564Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
awtwL0340Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awtwL0836Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ghttwL0328Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghttwL1068Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghttwL1581Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtwL0312Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gktwL0595Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gtbtwL0343Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghztwL0317Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
grbtwL0336Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghttwL2266Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gktwL0905Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtwL1103Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gtbtwL0824Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
grbtwL0803Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghztwL1078Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hgstwL0334Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghtwL1657Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gktwL1699Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghztwL1599Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hgstwL1108Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghtwL2357Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghztwL2285Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hgstwL1677Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgstwL2391Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
actwL0477Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hjtwL0326Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
actwL1071Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hbtwL2653Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbtwL3056Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjtwL1058Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjtwL1567Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjtwL2275Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
rbtwL0472Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
rjtwL0862Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rjtwL1455Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rbtwL2606Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
twtwL0348Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
adtwL0335Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL0313Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL0337Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL1146Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL1105Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
adtwL1704Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
totwL1148Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hntwL1639Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL1715Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL2408Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL2362Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL2432Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hztwL0321Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL1067Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL1591Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL2279Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
twuhR0838Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR0857Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR0871Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR0893Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dtttwL0242Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtttwL0698Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtotwL0145Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dtotwL0240Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dtotwL0663Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dfitwL0142Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfitwL1055Gossypium aridum (D4) genome ISU_v1Gossypium aridum
gtitwL0835Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
dritwL0133Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
dritwL0652Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
dritwL1137Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
dqitwL0170Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqitwL0717Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqitwL1219Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
ndmtwL0338Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL1105Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL1645Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL2364Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
bartwL0308Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL1020Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL1526Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL2184Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbtwL0310Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL1018Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL1501Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL2171Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
jmbtwL0344Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL1089Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL1611Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL2312Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
psctwL0306Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL1018Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL1521Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL2169Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adytwL0327Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL1053Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL1561Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL2241Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hpftwL0330Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL1070Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL1597Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL2279Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Ghe02G21980Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
EVM_prediction_Ga02G0081Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Cotton_D_gene_10011834Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gbar_A02G018340.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
D5.v1.pred_00038695-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
Gar02G20500Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
gene-E1A91_D03G008400v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Golon.002G008100-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gene-EPI10_004218-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
GB_D03G0078Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gene-E1A91_A02G191300v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gothu.00041880-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
GB_A02G2007Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Cotton_A_01549Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
EVM0013934.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
Gbscaffold16955.2.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Kirkii_Juiced.00g147940.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
TURN.02g029240.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
genemark-At_02_GB713-gene-0.772-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gh_D03G0076Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GH_D03G0081Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gohir.D03G008200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Gohir.A02G171900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
mk-At_02-augustus-gene-107.315-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Gh_D03G008100.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Gh_A02G1646Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gohir.A02G171900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
maker-Dt_03-aug-g-0.277-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GH_A02G1984Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
D03G00830.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
maker-At_02-aug-g-107.315-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GhirPA0201T008200.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhirPD0301T172000.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GH_D03G00074_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
genemark-Dt_03_GB713-gene-0.442-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GH_A02G01962_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gohir.D03G008200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
CotAD_02285Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
A02G22170.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GhM_A02G2190.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GhM_D03G0081.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
mk-Dt_03-augustus-gene-0.277-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Gh_A02G203300.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ghi_D03G00381.geneGhi_D03G00381.gene_WHU-TM1_v1Gossypium hirsutumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ghi_D03G00381_WHU-TM1_v1Ghi_D03G00381_WHU-TM1_v1Gossypium hirsutumpolypeptide
Ghi_D03G00381Ghi_D03G00381_WHU-TM1_v1-proteinGossypium hirsutumpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghi_D03G00381.CDS1Ghi_D03G00381.CDS1_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS2Ghi_D03G00381.CDS2_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS3Ghi_D03G00381.CDS3_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS4Ghi_D03G00381.CDS4_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS5Ghi_D03G00381.CDS5_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS6Ghi_D03G00381.CDS6_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS7Ghi_D03G00381.CDS7_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS8Ghi_D03G00381.CDS8_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS9Ghi_D03G00381.CDS9_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS10Ghi_D03G00381.CDS10_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS11Ghi_D03G00381.CDS11_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D03G00381.CDS12Ghi_D03G00381.CDS12_WHU-TM1_v1Gossypium hirsutumCDS


InterPro
Analysis Name: InterProScan Analysis for WHU_v1_a1 Gossypium hirsutum proteins
Date Performed: 2020-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004358Signal transduction histidine kinase-related protein, C-terminalPRINTSPR00344BCTRLSENSORcoord: 731..741
score: 30.09
coord: 713..727
score: 39.33
coord: 748..766
score: 50.13
NoneNo IPR availableGENE3D1.10.287.130coord: 486..565
e-value: 4.3E-24
score: 86.3
NoneNo IPR availableGENE3D3.40.50.2300coord: 1070..1230
e-value: 2.3E-42
score: 146.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 964..983
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 992..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1049..1080
NoneNo IPR availablePANTHERPTHR43711:SF15coord: 19..1230
NoneNo IPR availablePANTHERPTHR43711FAMILY NOT NAMEDcoord: 19..1230
NoneNo IPR availableCDDcd16922HATPase_EvgS-ArcB-TorS-likecoord: 618..778
e-value: 3.08998E-25
score: 99.4894
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 611..786
e-value: 6.6E-21
score: 74.9
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainPFAMPF00512HisKAcoord: 499..564
e-value: 1.7E-14
score: 53.6
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainCDDcd00082HisKAcoord: 499..560
e-value: 1.30614E-14
score: 67.6228
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 1091..1222
e-value: 3.5E-20
score: 72.2
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1090..1228
score: 41.406
IPR001789Signal transduction response regulator, receiver domainCDDcd00156RECcoord: 1092..1227
e-value: 7.85642E-30
score: 112.669
IPR005467Histidine kinase domainPROSITEPS50109HIS_KINcoord: 505..788
score: 38.441
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 1087..1228
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 553..784
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilySUPERFAMILY47384Homodimeric domain of signal transducing histidine kinasecoord: 486..565

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ghi_D03G00381_WHU-TM1_v1 ID=Ghi_D03G00381_WHU-TM1_v1; Name=Ghi_D03G00381; organism=Gossypium hirsutum; type=mRNA; length=3702bp
ATGGACACTACTCCATTGAGGAAACTATTACATGGGATTTCAGAGTTTGT
TGTTTCTTCTTCAACGTGTGGGAAAAAAACAGCCGCCACACGTGGTCGTA
GGATTGTACATAGGGATGTTGAAAGGGAAGAGTTTCAGTACGGTGGTGGT
GGTGGTAGTGGTGGCGGCGGCGGCGGTGGTCATTGCTTGTCGTCTTATTA
CAGTGTTTTTGTTGCTCGGCTTGCTATCATGGTGATGCTAGCTATTTTGA
TTGGGCTGCTAACAGTTCTAACCTGGCATTTCACAAAGGTTTACACAACA
AAATCATTAAACACATTGGCATTTGGTCTTCGTTATGAGCTTCTTCAAAG
ACCAATCTTAAGGATGTGGAACATCTTGAATTCGACCTCGGAAATTACTA
CAGCTCAAGTCAAGTTGTCTGAATATGTAATTAGGCGCTACAGTAAACCC
ACCAACCAGGCAGAACAAGTTGAGCTGTATGAAATGATGAAAGACATAAC
ATGGGCACTATTTGCAAGCCGTAAAGCTCTAAATGCCATAACCATAAACT
ACAAAAATGGATTTGTACAAGCATTCCATAGGGACCATAGAAGCAACAAC
ACATTCTACATCTATTCCGATCTCGCAAACTATTCAATCAGCTCCACCGA
ATCGTACCATAACGAGATGTTATCGTCCCGAAAAGGCCGGAACGATCAAT
TCATCCACGGCAATGTCTCGGCGATATGGTACCGCCAACCGCTCGATCCT
GTGACGGGTGAAAAGAAAGGAAAGCCTTCACAAATCCCACCGGATGATCT
TATCAACATAGCAGGCCCGTCTCAAGTGCCTGATGGGGTAGCTTCATGGC
ATGTATCGGTTAGTAAATACACCGATTCACCGTTGCTTTCGGCTGCTTTG
CCGGTTTGGGACGCTACGAATACGAGTATCATGGCTGTTGTCGGTGTTAC
GACCGCTCTTTTTAGTGTAGGACAGTTGATGAAAGAACTGGTTGAAGTGC
ATAGTGGGTATATATATTTGACTTCACAACAAGGTTACTTGTTAGCGACA
TCAACTAATGCTCCTTTGTTAAAAAACACGACGAAAGGGCCGAAACTAAT
GATGGCCGTCGACTCCGAGGACCGTGTGATACGAATGGGAGCTCAATGGT
TGCAAGAAGCTTATGGCAATAAGTTCCCACCTGGCCATGTGGTTCATGTT
GAAAAAGCTAACCTTGGGGATCAACATTATTACATTGATTCATTTTTTCT
CAACTTAACAAGGTTACCTATGGTTGGGGTTATTATAATTCCGAGAAAGT
ATATAATGGGGAAAGTTGATGAAAGGGCATTGAAAACATTGGTTATATTG
ATATCAGCATCTGTATGTATCTTAGTTATTGGATGTGTTTGCATTTTGAT
ACTTACGAATGGAGTTTCCAAAGAAATGAAACTCCGAGCTGAGTTAATAA
GTCATCTCGATGCAAGAAGAAGAGCTGAAGCTTCGAGTAATTACAAAAGC
CAATTCCTCGCGAACATGAGTCATGAATTAAGAACACCTATGGCTGCTGT
TATCGGATTGTTGGACATTCTTATCTGCGATGATTGCCTTACGAACGAGC
AATACACAATGGTTACTCAGATTCGTAAATGCTCAACGGCTTTACTCCGG
CTTCTTAACAACATATTGGATCTAAGCAAGGTTGAATCGGGAAAATTGGT
GTTGGAAGAAGCTGAGTTCGATTTGGGACGGGAACTCGAAGGACTTGTTG
ATATGTTCTCTGTACAATGCATTAACCATAATGTGGAAACAGTTCTGGAT
CTCTCTGATGATATTCCGAAAGTAGTTCAAGGAGATTCGGCTAGAGTTGT
TCAAGTTTTTGCTAACTTAATAAGCAATTCCATCAAGTTCACAACATGTA
AGATGAACATTTATTTCGATGATGGAACTGCTACACTTGAGCAGAACTTA
ACTGTTTTCGGATGGTTTGCAGCGGGACATATCGTACTCCGCGGATGGTG
TGAGAACCCGAATGTGTGTAGTGATTCCGGGAAGTTTGCTCCTGATCAGA
AGAAACCGTTGTCTGCATTAAAGACAAAGTTGAAACAACACGGAAACCAT
ACGAAGAAGGCTGGCAAGAAAGACAACAAAATGATTCTTTGGTTCGAAGT
CGATGACACTGGCTGTGGAATTGACCGGAGCAAATGGGAATCGGTGTTCG
AGAGCTTTGAGCAAGCTGATCCTTCAACAACTCGAACGCATGGTGGCACC
GGTCTCGGACTGTGCATCGTGAGAACCTTGGTTAACAAAATGGGAGGAGA
AATCAAGGTTGTTAAAAAGAACGGTCCCGGAACTCTAATGAGACTATTTT
TGCTCCTTAGTACCCCTGCAGATGGTGTAGAACAACAAGGACGAATTGAT
GTCTCGAAGCACAGTGTAGCTGTAATCCTTGCATTACATGGTAGCATAGG
TAGATTGACAATGTCGAAATGGCTATCGAAAAACGGAGTCCCGACATTGG
AAGCATCGGAATGGAATGAACTAACACAAATCCTCCATGAACTATTCCAT
GCCCGAACTCTTGATTCTGGTTTCGACACTCATTATTCACTGGCTGAACC
TGTGAGGTCCAAAGTACAAAGCTTACAAGACATGAAGAACCCGGTTTACA
TCATAGTTGTCGATCTCGGGTTGCTCGATTTGAGCACCAACATATGGAAA
GAACAGCTTAATTTCCTCGATAAATTCTCCGGCCTTGTGAAATTCGCATG
GATGCTGAATCACGATACATCCAATGCTATAAAGATGGAACTCCGTAGGA
AAGGACATATATTGATGGTTAATAAGCCATTATATAAGGCCAAAATGCTA
CATATTTTGGAAGCTGTCATAAAAGAAAGCTATGTTGAGCCTCAAAACCG
AAGTCCGAATGGAACGAAAGGTACATCTAAAGAAGGTGATTCTCACGAAT
GTCTTGAAATCGATTCAACTCAGTTCGAGACATGCAGCTCTGATGATTCC
GATGAAACAGCTGGTGTTAGCTCTGTAAGTTCGGTCCATATCAGAGAGGA
ATCGAGAGAAGGAACCATACTAAAATCCAGTCCATCGACACTTAGGAACT
GTCTAGTCGAGTTCACGCGATTAGGCTTAGATCAATGCCATACCAAACCA
AAGTTGCAAAATACCGAAGACATCAAACCCGAAAATCCCGACTCCCCAGA
ACAACCTTCGGTAAGAAGCAATGCTAAAGACAGAATAACAAACGAACCCA
AATCTCTCCAAGGTTTACGGATACTCCTAGCAGAAGACACACCAGTTCTC
CAAAGAGTAGCAACCATCATGCTCGAAAAAATGGGAGCTGTAGTAATCGC
GGTAGGAGATGGAGTACAAGCGGTCGAAGCCCTCAATTCCGTGCTCGATA
ATGACAACGAACATAGAAACGACCAAGTGGAAACAGAGATATGCGATTCT
CCACCATATGATTTGATCTTAATGGATTGCCAAATGCCAATGATGGACGG
ATACGAAGCGACAAAAGCGATAAGAAAATCGGAAGAAAGAACGGGTTGGC
ATATTCCAATCGTTGCTTTGACGGCTCATGCTATGTCATCAGATAAAGAC
AAATGCTTGAAAGTAGGCATGGATGCTTATTTAACAAAGCCAATTGATTA
CAAGTTGATGGTGTCCACCATCCTTTCACTTACTAAACAGTCATCACCTT
GA
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protein sequence of Ghi_D03G00381_WHU-TM1_v1

>Ghi_D03G00381_WHU-TM1_v1 ID=Ghi_D03G00381_WHU-TM1_v1; Name=Ghi_D03G00381_WHU-TM1_v1; organism=Gossypium hirsutum; type=polypeptide; length=1234bp
MDTTPLRKLLHGISEFVVSSSTCGKKTAATRGRRIVHRDVEREEFQYGGG
GGSGGGGGGGHCLSSYYSVFVARLAIMVMLAILIGLLTVLTWHFTKVYTT
KSLNTLAFGLRYELLQRPILRMWNILNSTSEITTAQVKLSEYVIRRYSKP
TNQAEQVELYEMMKDITWALFASRKALNAITINYKNGFVQAFHRDHRSNN
TFYIYSDLANYSISSTESYHNEMLSSRKGRNDQFIHGNVSAIWYRQPLDP
VTGEKKGKPSQIPPDDLINIAGPSQVPDGVASWHVSVSKYTDSPLLSAAL
PVWDATNTSIMAVVGVTTALFSVGQLMKELVEVHSGYIYLTSQQGYLLAT
STNAPLLKNTTKGPKLMMAVDSEDRVIRMGAQWLQEAYGNKFPPGHVVHV
EKANLGDQHYYIDSFFLNLTRLPMVGVIIIPRKYIMGKVDERALKTLVIL
ISASVCILVIGCVCILILTNGVSKEMKLRAELISHLDARRRAEASSNYKS
QFLANMSHELRTPMAAVIGLLDILICDDCLTNEQYTMVTQIRKCSTALLR
LLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLD
LSDDIPKVVQGDSARVVQVFANLISNSIKFTTCKMNIYFDDGTATLEQNL
TVFGWFAAGHIVLRGWCENPNVCSDSGKFAPDQKKPLSALKTKLKQHGNH
TKKAGKKDNKMILWFEVDDTGCGIDRSKWESVFESFEQADPSTTRTHGGT
GLGLCIVRTLVNKMGGEIKVVKKNGPGTLMRLFLLLSTPADGVEQQGRID
VSKHSVAVILALHGSIGRLTMSKWLSKNGVPTLEASEWNELTQILHELFH
ARTLDSGFDTHYSLAEPVRSKVQSLQDMKNPVYIIVVDLGLLDLSTNIWK
EQLNFLDKFSGLVKFAWMLNHDTSNAIKMELRRKGHILMVNKPLYKAKML
HILEAVIKESYVEPQNRSPNGTKGTSKEGDSHECLEIDSTQFETCSSDDS
DETAGVSSVSSVHIREESREGTILKSSPSTLRNCLVEFTRLGLDQCHTKP
KLQNTEDIKPENPDSPEQPSVRSNAKDRITNEPKSLQGLRILLAEDTPVL
QRVATIMLEKMGAVVIAVGDGVQAVEALNSVLDNDNEHRNDQVETEICDS
PPYDLILMDCQMPMMDGYEATKAIRKSEERTGWHIPIVALTAHAMSSDKD
KCLKVGMDAYLTKPIDYKLMVSTILSLTKQSSP*
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mRNA from alignment at D03:542210..548570-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ghi_D03G00381_WHU-TM1_v1 ID=Ghi_D03G00381_WHU-TM1_v1; Name=Ghi_D03G00381; organism=Gossypium hirsutum; type=mRNA; length=6361bp; location=Sequence derived from: D03:542210..548570- (Gossypium hirsutum
ATGGACACTACTCCATTGAGGAAACTATTACATGGGATTTCAGAGTTTGT
TGTTTCTTCTTCAACGTGTGGGAAAAAAACAGCCGCCACACGTGGTCGTA
GGATTGTACATAGGGATGTTGAAAGGGAAGAGTTTCAGTACGGTGGTGGT
GGTGGTAGTGGTGGCGGCGGCGGCGGTGGTCATTGCTTGTCGTCTTATTA
CAGTGTTTTTGTTGCTCGGCTTGCTATCATGGTTAGTGAACATGAAACTC
TCCCTTGTCGTTCTACAGTTTGAGAATTTCAGTCATTTTGTTTGGATTTA
AGGTTTTTTTTTTGTTGGAACAAAAATGGCTTCTTTTTCTCAGCTCATCC
ATGGCTGAAACTAGAGGGTCAAATTCTGGTTTTGGTCCCTCTGTTATGCT
CAAATTTGGGGTTGTGCTTAAAATTTGGCATGATTCTTTTCCTTTAGTTG
ATCAAAATATCGTTAGAATTCCAATGAAATAGTATTTTACTCATCCATGG
CTGAAACTAGCGGGTCAAATTCTGATTTTGTTCCCTCTGTTATGCTTAAA
TTTGGGGTTGTGTTTATAATTTGGCATGATTCTTTTCCTTTAGTTAATCA
AAATATCGTTAGAATTCCAATCAAATAGTAGTTTGCTCATCCATGGTTAA
AATCAGGGTCAAATTCTGATTTTGGCCCTTCTATTATGCTCTAATTTTGG
AATTAGTCCCTCTAATTTGCAATAATTCTTTTCCTCTACCTTTATAATTT
CATTAGTTAATCCCTTTTGGTATCTTTAATTTAGTGTCTAATCCTGTTCC
TCTAATTCCAAATAATTTTTCCTTCTATTATGCTCTAAGTTGGGATTTAG
TGTTCATAATTTAGCATAATTTGGTTTTTCTACTTTTATAATATCATTAG
TTAATCCCTTTAATATCTTACTCATTAGATTGAATTTTTATTTTAACAAA
TATTGCTTTTCTTCAAGCTCATCCATGGCTAAAACCAGGGGTTAAATTAT
GGTTTTGGCCCCTCTAATATACTCTAATTTGAGATGTAGTCCCTATAATT
TGACAAAATTCATTTCTTCTACTTTTATAAGTTAATCAAAATATAGTTCA
TTTATTACTTGGCTCATTGAAGCTTTCTTTTTGGAACAAATATTGCTTCT
TTTTCAGCTCACCCGTGCCCAAAAAACTAAGGGTCAAATTATGGGGTTAA
TCCCTCTATTAAATGTTTTTTTTTCCAGGTGATGCTAGCTATTTTGATTG
GGCTGCTAACAGTTCTAACCTGGCATTTCACAAAGGTTTACACAACAAAA
TCATTAAACACATTGGCATTTGGTCTTCGTTATGAGCTTCTTCAAAGACC
AATCTTAAGGATGTGGAACATCTTGAATTCGACCTCGGAAATTACTACAG
CTCAAGTCAAGTTGTCTGAATATGTAATTAGGCGCTACAGTAAACCCACC
AACCAGGCAGAACAAGTTGAGGTTCATCCTTATAAAACTTCAATAGTCAA
ATTCTATAAAAGCTCCTCCTATTATACTTTTTTTTTTGCAAATTTAGTCC
TTCTGTTATAGTTTTTACTTTTCGAAATGTGGTTGTCGGTCCTGAGATCA
ACTTTTTTTTAGTAGTTTGACGTATGGTCAGTTGCAGATTTTGGTATTAA
GTTTTGGGGGGGAGGGGGGGGGGGGGAGGGGAGCTGATTACAATTTTCAA
AAACTTTGGAAGAAGATTTTATGACAACTTTTATAAGTTTTGGTAAGCCT
AATTAAAACTTTTGAAATTTTTGGAGGGTTAATGAGAATTTACAAAAATT
TTAAAGGGGTCTCATTAATTTTTTTTTTTTTTTTGAAGTTGGGAGATTTT
GATTTTTTTTTAAAAACTCTGGTTGTTCTAATTAAAGCTTGATGAGAATT
CACAAAAATTTTGAAGGGTCTTCTTAAAATTTTGGAAGGCTTAATAAAAA
GTTTCAAAACTTTTGGGGGTTTAAATTAAATTTAAAAAAATTCAGGGCTC
TAATGAAAATTTTCAAAAATTTTGGAGAGCAAAAGCCCCTGGCTCCTATC
ACCATCTGCCCCAGCATATGATGACATGATATATACATTTTTTTATATAT
CACCTCAATTAATGCTTAAAAAATAATCAAAATAAAATTATTTGACAGAA
TTAATGGAAAAAAAAAAGTTAATTTCAGGACTGAATAGAGAGACGAAATT
CGCTAAAATTACATATATAGGGACCTTATTTAGGATTTGACCAAAACTTC
ATTTTCTTCATTATAAGCATTGTTTAAGAAAAAAAATTTAACCATTTTTT
GTTTTGTTTGTGTTGATTTATTGCAATCTTCGCAGCTGTATGAAATGATG
AAAGACATAACATGGGCACTATTTGCAAGCCGTAAAGCTCTAAATGCCAT
AACCATAAACTACAAAAATGGATTTGTACAAGCATTCCATAGGGACCATA
GAAGCAACAACACATTCTACATCTATTCCGATCTCGCAAACTATTCAATC
AGCTCCACCGAATCGTACCATAACGAGATGTTATCGTCCCGAAAAGGCCG
GAACGATCAATTCATCCACGGCAATGTCTCGGCGATATGGTACCGCCAAC
CGCTCGATCCTGTGACGGGTGAAAAGAAAGGAAAGCCTTCACAAATCCCA
CCGGATGATCTTATCAACATAGCAGGCCCGTCTCAAGTGCCTGATGGGGT
AGCTTCATGGCATGTATCGGTTAGTAAATACACCGATTCACCGTTGCTTT
CGGCTGCTTTGCCGGTTTGGGACGCTACGAATACGAGTATCATGGCTGTT
GTCGGTGTTACGACCGCTCTTTTTAGTGTAGGACAGTTGATGAAAGAACT
GGTTGAAGTGCATAGTGGGTATATATATTTGACTTCACAACAAGGTTACT
TGTTAGCGACATCAACTAATGCTCCTTTGTTAAAAAACACGACGAAAGGG
CCGAAACTAATGATGGCCGTCGACTCCGAGGACCGTGTGATACGAATGGG
AGCTCAATGGTTGCAAGAAGCTTATGGCAATAAGTTCCCACCTGGCCATG
TGGTTCATGTTGAAAAAGCTAACCTTGGGGATCAACATTATTACATTGAT
TCATTTTTTCTCAACTTAACAAGGTTACCTATGGTAAGTTCCGAAACTAT
CCCGTCTTTTCCGATTAACCCGAACATCGAAACTAAACGTTTATGTTGCC
GGTGCAGGTTGGGGTTATTATAATTCCGAGAAAGTATATAATGGGGAAAG
TTGATGAAAGGGCATTGAAAACATTGGTTATATTGATATCAGCATCTGTA
TGTATCTTAGTTATTGGATGTGTTTGCATTTTGATACTTACGAATGGAGT
TTCCAAAGAAATGAAACTCCGAGCTGAGTTAATAAGTCATCTCGATGCAA
GAAGAAGAGCTGAAGCTTCGAGTAATTACAAAAGCCAATTCCTCGCGAAC
ATGAGGTAACCGATTTCGGTTTTTCAGGTCATTTGACATTATTGCCTTGC
ATGCATGTTAATGTATCTTTTGTGTTTTAACAGTCATGAATTAAGAACAC
CTATGGCTGCTGTTATCGGATTGTTGGACATTCTTATCTGCGATGATTGC
CTTACGAACGAGCAATACACAATGGTTACTCAGATTCGTAAATGCTCAAC
GGCTTTACTCCGGCTTCTTAACAACATATTGGATCTAAGCAAGGTAAGAT
TCAAAGACAAACTAATAAGAATATAAACTTAAAAAGTCGTAAAATTGAGG
ACGATGTTTACATTTTGTAGGTTGAATCGGGAAAATTGGTGTTGGAAGAA
GCTGAGTTCGATTTGGGACGGGAACTCGAAGGACTTGTTGATATGTTCTC
TGTACAATGCATTAACCATAATGTGGAAACAGTTCTGGATCTCTCTGGTA
TGACTTAAAACGAAATGTATGATCATCGGTTTATGTTTATACAAGTTATG
TTACATTATAATTTCGTAAACAGATGATATTCCGAAAGTAGTTCAAGGAG
ATTCGGCTAGAGTTGTTCAAGTTTTTGCTAACTTAATAAGCAATTCCATC
AAGTTCACAACATGTAAGATGAACATTTATTTCGATGATGGAACTGCTAC
ACTTGAGCAGAACTTAACTGTTTTCGGATGGTTTGCAGCGGGACATATCG
TACTCCGCGGATGGTGTGAGAACCCGAATGTGTGTAGTGATTCCGGGAAG
TTTGCTCCTGATCAGAAGAAACCGTTGTCTGCATTAAAGACAAAGTTGAA
ACAACACGGAAACCATACGAAGAAGGCTGGCAAGAAAGACAACAAAATGA
TTCTTTGGTTCGAAGTCGATGACACTGGCTGTGGTAAGATTCTTTGGCGA
AAAGGGAAAAAGGGTTCAATTTTGAGGTAGCTTAGCTTGAACTAATTTAT
CCTCCATGATCTGCAGGAATTGACCGGAGCAAATGGGAATCGGTGTTCGA
GAGCTTTGAGCAAGCTGATCCTTCAACAACTCGAACGTAAGTACTTGGAG
AAAAAAATCGTATTTTAACGAGCTGATTAAGAATTGTAATGCACTTTTGG
TCTTTCAGGCATGGTGGCACCGGTCTCGGACTGTGCATCGTGAGAACCTT
GGTAAGTGGAGTTCCTTGACAAACAAGTTTCGTATTCCATTACAAATTTT
CATTACCATTTGACATATGAAACTACATTGTGCTGAAATATTGTGTACAA
AATGATGGATGACATCGTTCTTTCACTCGTATTATCGATGACAGGTTAAC
AAAATGGGAGGAGAAATCAAGGTTGTTAAAAAGAACGGTCCCGGAACTCT
AATGAGACTATTTTTGCTCCTTAGTACCCCTGCAGATGGTGTAGAACAAC
AAGGACGAATTGATGTCTCGAAGCACAGTGTAGCTGTGAGTAAAGTTTGA
TTATCTCAATACTCGACTTTACAGCTTTTACGTTAGTACATAGAGTTTTT
TTTTATCATAAAGTGCTCGAAAATCGGCTTGAGATCGAAGCAAATATGAA
TGCAGGTAATCCTTGCATTACATGGTAGCATAGGTAGATTGACAATGTCG
AAATGGCTATCGAAAAACGGAGTCCCGACATTGGAAGCATCGGAATGGAA
TGAACTAACACAAATCCTCCATGAACTATTCCATGCCCGAACTCTTGATT
CTGGTTTCGACACTCATTATTCACTGGCTGAACCTGTGAGGTCCAAAGTA
CAAAGCTTACAAGACATGAAGAACCCGGTTTACATCATAGTTGTCGATCT
CGGGTTGCTCGATTTGAGCACCAACATATGGAAAGAACAGCTTAATTTCC
TCGATAAATTCTCCGGCCTTGTGAAATTCGCATGGATGCTGAATCACGAT
ACATCCAATGCTATAAAGATGGAACTCCGTAGGAAAGGACATATATTGAT
GGTTAATAAGCCATTATATAAGGCCAAAATGCTACATATTTTGGAAGCTG
TCATAAAAGAAAGCTATGTTGAGCCTCAAAACCGAAGTCCGAATGGAACG
AAAGGTACATCTAAAGAAGGTGATTCTCACGAATGTCTTGAAATCGATTC
AACTCAGTTCGAGACATGCAGCTCTGATGATTCCGATGAAACAGCTGGTG
TTAGCTCTGTAAGTTCGGTCCATATCAGAGAGGAATCGAGAGAAGGAACC
ATACTAAAATCCAGTCCATCGACACTTAGGAACTGTCTAGTCGAGTTCAC
GCGATTAGGCTTAGATCAATGCCATACCAAACCAAAGTTGCAAAATACCG
AAGACATCAAACCCGAAAATCCCGACTCCCCAGAACAACCTTCGGTAAGA
AGCAATGCTAAAGACAGAATAACAAACGAACCCAAATCTCTCCAAGGTTT
ACGGATACTCCTAGCAGAAGACACACCAGTTCTCCAAAGAGTAGCAACCA
TCATGCTCGAAAAAATGGGAGCTGTAGTAATCGCGGTAGGAGATGGAGTA
CAAGCGGTCGAAGCCCTCAATTCCGTGCTCGATAATGACAACGAACATAG
AAACGACCAAGTGGAAACAGAGATATGCGATTCTCCACCATATGATTTGA
TCTTAATGGATTGCCAAGTAAGAAAAAAAAATGCTTCATTTTTCAAATCA
AACTGCAAAACATTCAATCATGTTCTGTCTTTTCTTTTACAGATGCCAAT
GATGGACGGATACGAAGCGACAAAAGCGATAAGAAAATCGGAAGAAAGAA
CGGGTTGGCATATTCCAATCGTTGCTTTGACGGCTCATGCTATGTCATCA
GATAAAGACAAATGCTTGAAAGTAGGCATGGATGCTTATTTAACAAAGCC
AATTGATTACAAGTTGATGGTGTCCACCATCCTTTCACTTACTAAACAGT
CATCACCTTGA
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Coding sequence (CDS) from alignment at D03:542210..548570-

>Ghi_D03G00381_WHU-TM1_v1 ID=Ghi_D03G00381_WHU-TM1_v1; Name=Ghi_D03G00381; organism=Gossypium hirsutum; type=CDS; length=3702bp; location=Sequence derived from: D03:542210..548570- (Gossypium hirsutum
ATGGACACTACTCCATTGAGGAAACTATTACATGGGATTTCAGAGTTTGT
TGTTTCTTCTTCAACGTGTGGGAAAAAAACAGCCGCCACACGTGGTCGTA
GGATTGTACATAGGGATGTTGAAAGGGAAGAGTTTCAGTACGGTGGTGGT
GGTGGTAGTGGTGGCGGCGGCGGCGGTGGTCATTGCTTGTCGTCTTATTA
CAGTGTTTTTGTTGCTCGGCTTGCTATCATGGTGATGCTAGCTATTTTGA
TTGGGCTGCTAACAGTTCTAACCTGGCATTTCACAAAGGTTTACACAACA
AAATCATTAAACACATTGGCATTTGGTCTTCGTTATGAGCTTCTTCAAAG
ACCAATCTTAAGGATGTGGAACATCTTGAATTCGACCTCGGAAATTACTA
CAGCTCAAGTCAAGTTGTCTGAATATGTAATTAGGCGCTACAGTAAACCC
ACCAACCAGGCAGAACAAGTTGAGCTGTATGAAATGATGAAAGACATAAC
ATGGGCACTATTTGCAAGCCGTAAAGCTCTAAATGCCATAACCATAAACT
ACAAAAATGGATTTGTACAAGCATTCCATAGGGACCATAGAAGCAACAAC
ACATTCTACATCTATTCCGATCTCGCAAACTATTCAATCAGCTCCACCGA
ATCGTACCATAACGAGATGTTATCGTCCCGAAAAGGCCGGAACGATCAAT
TCATCCACGGCAATGTCTCGGCGATATGGTACCGCCAACCGCTCGATCCT
GTGACGGGTGAAAAGAAAGGAAAGCCTTCACAAATCCCACCGGATGATCT
TATCAACATAGCAGGCCCGTCTCAAGTGCCTGATGGGGTAGCTTCATGGC
ATGTATCGGTTAGTAAATACACCGATTCACCGTTGCTTTCGGCTGCTTTG
CCGGTTTGGGACGCTACGAATACGAGTATCATGGCTGTTGTCGGTGTTAC
GACCGCTCTTTTTAGTGTAGGACAGTTGATGAAAGAACTGGTTGAAGTGC
ATAGTGGGTATATATATTTGACTTCACAACAAGGTTACTTGTTAGCGACA
TCAACTAATGCTCCTTTGTTAAAAAACACGACGAAAGGGCCGAAACTAAT
GATGGCCGTCGACTCCGAGGACCGTGTGATACGAATGGGAGCTCAATGGT
TGCAAGAAGCTTATGGCAATAAGTTCCCACCTGGCCATGTGGTTCATGTT
GAAAAAGCTAACCTTGGGGATCAACATTATTACATTGATTCATTTTTTCT
CAACTTAACAAGGTTACCTATGGTTGGGGTTATTATAATTCCGAGAAAGT
ATATAATGGGGAAAGTTGATGAAAGGGCATTGAAAACATTGGTTATATTG
ATATCAGCATCTGTATGTATCTTAGTTATTGGATGTGTTTGCATTTTGAT
ACTTACGAATGGAGTTTCCAAAGAAATGAAACTCCGAGCTGAGTTAATAA
GTCATCTCGATGCAAGAAGAAGAGCTGAAGCTTCGAGTAATTACAAAAGC
CAATTCCTCGCGAACATGAGTCATGAATTAAGAACACCTATGGCTGCTGT
TATCGGATTGTTGGACATTCTTATCTGCGATGATTGCCTTACGAACGAGC
AATACACAATGGTTACTCAGATTCGTAAATGCTCAACGGCTTTACTCCGG
CTTCTTAACAACATATTGGATCTAAGCAAGGTTGAATCGGGAAAATTGGT
GTTGGAAGAAGCTGAGTTCGATTTGGGACGGGAACTCGAAGGACTTGTTG
ATATGTTCTCTGTACAATGCATTAACCATAATGTGGAAACAGTTCTGGAT
CTCTCTGATGATATTCCGAAAGTAGTTCAAGGAGATTCGGCTAGAGTTGT
TCAAGTTTTTGCTAACTTAATAAGCAATTCCATCAAGTTCACAACATGTA
AGATGAACATTTATTTCGATGATGGAACTGCTACACTTGAGCAGAACTTA
ACTGTTTTCGGATGGTTTGCAGCGGGACATATCGTACTCCGCGGATGGTG
TGAGAACCCGAATGTGTGTAGTGATTCCGGGAAGTTTGCTCCTGATCAGA
AGAAACCGTTGTCTGCATTAAAGACAAAGTTGAAACAACACGGAAACCAT
ACGAAGAAGGCTGGCAAGAAAGACAACAAAATGATTCTTTGGTTCGAAGT
CGATGACACTGGCTGTGGAATTGACCGGAGCAAATGGGAATCGGTGTTCG
AGAGCTTTGAGCAAGCTGATCCTTCAACAACTCGAACGCATGGTGGCACC
GGTCTCGGACTGTGCATCGTGAGAACCTTGGTTAACAAAATGGGAGGAGA
AATCAAGGTTGTTAAAAAGAACGGTCCCGGAACTCTAATGAGACTATTTT
TGCTCCTTAGTACCCCTGCAGATGGTGTAGAACAACAAGGACGAATTGAT
GTCTCGAAGCACAGTGTAGCTGTAATCCTTGCATTACATGGTAGCATAGG
TAGATTGACAATGTCGAAATGGCTATCGAAAAACGGAGTCCCGACATTGG
AAGCATCGGAATGGAATGAACTAACACAAATCCTCCATGAACTATTCCAT
GCCCGAACTCTTGATTCTGGTTTCGACACTCATTATTCACTGGCTGAACC
TGTGAGGTCCAAAGTACAAAGCTTACAAGACATGAAGAACCCGGTTTACA
TCATAGTTGTCGATCTCGGGTTGCTCGATTTGAGCACCAACATATGGAAA
GAACAGCTTAATTTCCTCGATAAATTCTCCGGCCTTGTGAAATTCGCATG
GATGCTGAATCACGATACATCCAATGCTATAAAGATGGAACTCCGTAGGA
AAGGACATATATTGATGGTTAATAAGCCATTATATAAGGCCAAAATGCTA
CATATTTTGGAAGCTGTCATAAAAGAAAGCTATGTTGAGCCTCAAAACCG
AAGTCCGAATGGAACGAAAGGTACATCTAAAGAAGGTGATTCTCACGAAT
GTCTTGAAATCGATTCAACTCAGTTCGAGACATGCAGCTCTGATGATTCC
GATGAAACAGCTGGTGTTAGCTCTGTAAGTTCGGTCCATATCAGAGAGGA
ATCGAGAGAAGGAACCATACTAAAATCCAGTCCATCGACACTTAGGAACT
GTCTAGTCGAGTTCACGCGATTAGGCTTAGATCAATGCCATACCAAACCA
AAGTTGCAAAATACCGAAGACATCAAACCCGAAAATCCCGACTCCCCAGA
ACAACCTTCGGTAAGAAGCAATGCTAAAGACAGAATAACAAACGAACCCA
AATCTCTCCAAGGTTTACGGATACTCCTAGCAGAAGACACACCAGTTCTC
CAAAGAGTAGCAACCATCATGCTCGAAAAAATGGGAGCTGTAGTAATCGC
GGTAGGAGATGGAGTACAAGCGGTCGAAGCCCTCAATTCCGTGCTCGATA
ATGACAACGAACATAGAAACGACCAAGTGGAAACAGAGATATGCGATTCT
CCACCATATGATTTGATCTTAATGGATTGCCAAATGCCAATGATGGACGG
ATACGAAGCGACAAAAGCGATAAGAAAATCGGAAGAAAGAACGGGTTGGC
ATATTCCAATCGTTGCTTTGACGGCTCATGCTATGTCATCAGATAAAGAC
AAATGCTTGAAAGTAGGCATGGATGCTTATTTAACAAAGCCAATTGATTA
CAAGTTGATGGTGTCCACCATCCTTTCACTTACTAAACAGTCATCACCTT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004358Sig_transdc_His_kin-like_C
IPR003594HATPase_dom
IPR003661HisK_dim/P_dom
IPR001789Sig_transdc_resp-reg_receiver
IPR005467His_kinase_dom
IPR011006CheY-like_superfamily
IPR036890HATPase_C_sf
IPR036097HisK_dim/P_sf
Vocabulary: Molecular Function
TermDefinition
GO:0016772transferase activity, transferring phosphorus-containing groups
GO:0000155phosphorelay sensor kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
GO:0007165signal transduction
GO:0000160phosphorelay signal transduction system