Ghi_D12G11561

Transcript Overview
NameGhi_D12G11561
Unique NameGhi_D12G11561_WHU-TM1_v1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length630
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D12chromosomeD12:59175530..59179490 +Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gossypium hirsutum (AD1) 'TM-1' genome WHU_v12020-04-04
InterProScan Analysis for WHU_v1_a1 Gossypium hirsutum proteins2020-04-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
gdtwL0415Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL0404Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL0597Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL0569Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL1155Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL1120Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL1804Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL1744Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL2146Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdtwL2469Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL2360Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL2661Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL2535Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL2949Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL2815Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gdtwL3502Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
bztwL3361Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
hwtwL0428Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwtwL0610Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwtwL0918Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hwtwL1958Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
gautwL0374Gossypium australe (G2) genome CRI_v1.1Gossypium australe
fntwL0420Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gautwL0552Gossypium australe (G2) genome CRI_v1.1Gossypium australe
fntwL0594Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gbtwL0418Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gautwL0866Gossypium australe (G2) genome CRI_v1.1Gossypium australe
fntwL0879Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gbtwL0612Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
dttwL0641Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
bhtwL0848Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gautwL1357Gossypium australe (G2) genome CRI_v1.1Gossypium australe
gbtwL1177Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
fntwL1575Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
gbtwL1821Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL2920Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbtwL2485Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbtwL2669Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL4134Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbtwL2962Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhtwL4573Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhtwL5594Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbtwL3543Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
abtwL0607Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
abtwL2725Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
awtwL0102Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awtwL0415Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awtwL0591Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ghttwL0408Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghttwL0573Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
awtwL1576Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ghttwL1112Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gktwL0229Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghttwL1716Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gktwL0497Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghttwL2039Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtwL0590Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gtbtwL0418Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghztwL0404Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gtbtwL0586Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghztwL0584Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
grbtwL0407Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghttwL2334Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
grbtwL0576Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghttwL2505Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtwL1159Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gtbtwL0872Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
gktwL1135Gossypioides kirkii genome ISU_v3Gossypioides kirkii
grbtwL0847Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghztwL1125Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghttwL2781Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
hgstwL0429Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgstwL0610Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghtwL1788Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gktwL1770Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gtbtwL1568Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghttwL3309Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghztwL1732Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
grbtwL1495Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
hgstwL1159Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghztwL2044Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtwL2440Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghtwL2636Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghztwL2354Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghztwL2535Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hgstwL1816Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghztwL2812Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
hgstwL2152Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
actwL0131Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
ghtwL3494Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
hgstwL2472Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghztwL3359Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
actwL0569Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hgstwL2666Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
actwL0761Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hjtwL0399Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgstwL2949Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbtwL1902Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjtwL0566Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbtwL2440Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hgstwL3508Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbtwL3148Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjtwL1099Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbtwL3349Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
actwL1952Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hbtwL3943Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbtwL4633Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hjtwL1699Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjtwL2038Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjtwL2346Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hjtwL2515Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
rbtwL0090Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
rjtwL0084Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hjtwL2797Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
rbtwL0569Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
rbtwL0872Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hjtwL3373Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
rjtwL0906Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rjtwL1546Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rbtwL2874Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
twtwL0443Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
rjtwL1755Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
adtwL0426Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adtwL0624Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL0376Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hntwL0557Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL0426Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL1197Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
totwL0618Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hntwL1143Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL1206Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL1834Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adtwL2172Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL1776Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
adtwL2486Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
totwL1853Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL2692Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
totwL2192Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL2978Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL2427Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hntwL2600Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL2514Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
totwL2703Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hntwL2956Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
adtwL3550Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
totwL2988Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
adtwL3896Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hntwL3676Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
totwL3586Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hztwL0400Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL0567Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL1112Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL1724Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL2345Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL2516Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL2795Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hztwL3353Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
twuhR1910Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR1952Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR1971Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR1993Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR2003Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
twuhR2021Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
gtitwL0884Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gtitwL1361Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ndmtwL0416Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL0583Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL1150Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL1784Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL2432Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL2604Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL2898Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmtwL3463Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
bartwL0388Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL0542Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL1065Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL1653Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL2248Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL2407Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL2670Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
bartwL3185Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbtwL0390Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL0555Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL1061Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL1634Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL2241Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL2416Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL2674Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbtwL3187Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
jmbtwL0420Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL0586Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL1138Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL1752Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL2380Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL2555Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL2830Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbtwL3378Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
psctwL0376Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL0539Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL1063Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL1648Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL2228Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL2388Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL2664Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
psctwL3183Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adytwL0401Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL0564Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL1097Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL1693Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL2485Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL2757Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adytwL3302Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hpftwL0412Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL0581Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL1121Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL1737Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL2355Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL2539Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL2796Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpftwL3336Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Ghe02G09940Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Ghe12G23660Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Gbscaffold6303.5.1.2Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Gar01G21830Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
rna-gnl|WGS:VKDL|Gobar.A03G082300.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
GB_D03G1123Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gbscaffold12549.2.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gene-E1A91_A03G086800v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
gene-E1A91_A12G196900v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
EVM0036086.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
Cotton_D_gene_10029973Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
D5.v1.pred_00039813-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
Golon.012G216000-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
Gothu.00033895-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
rna-gnl|WGS_VKGI|Godar.A12G209200.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
rna-gnl|WGS_VKGE|Gotom.A12G209600.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gorai.008G198500.2Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS_VKGE|Gotom.A03G091100.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS_VKGI|Godar.A03G090800.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Gorai.003G101000.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
TURN.02g041110.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
Gbar_A03G008190.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Cotton_A_13350Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
Gbscaffold3351.29.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
GB_A03G0835Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
D5.v1.pred_00016436-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
rna-gnl|WGS:VKDL|Gobar.D03G115600.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
gene-E1A91_D03G110300v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
GB_D12G2092Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
EVM_prediction_Ga12G1006Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
EVM_prediction_Ga01G1930Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
rna-gnl|WGS:VKDL|Gobar.A12G191800.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Cotton_D_gene_10005175Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Gar12G23650Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
TURN.02g355400.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
Golon.002G122500-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
rna-gnl|WGS_VKGE|Gotom.D03G121600.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gene-EPI10_004340-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
Kirkii_Juiced.00g338720.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
GB_A12G2099Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Gohir.A03G069800.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GH_D03G01143_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gh_A12G204900.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghicr24_A03G085400.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
CotAD_01976Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GH_A12G2014Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
genemark-Dt_03-g-38.206-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
maker-Dt_12-aug-g-11.151-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
maker-At_03_GB713-augustus-gene-19.351-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GhirPA1201T097800.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhirPD0301T082500.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
CotAD_31717Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GH_A03G0838Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
maker-At_12-aug-g-98.43-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GH_A03G00872_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
maker-At_12_GB713-augustus-gene-10.464-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GhirPD1201T098800.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Ghir_D03G010640.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
mk-At_12-augustus-gene-98.43-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Gohir.A03G069800.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GhM_A03G0940.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gohir.D03G096300.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
CotAD_25870Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GH_A12G02003_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gohir.A12G182200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Ghicr24_A12G201500.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gh_A03G0620Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
maker-Dt_12_GB713-augustus-gene-9.520-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gohir.A12G182200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GH_D12G2013Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GhM_A12G2323.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Ghicr24_D03G106400.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gh_A12G1651Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
maker-Dt_03_GB713-augustus-gene-38.135-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gohir.D12G185100.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
genemark-Dt_03-proG-38.206-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GhM_D12G2216.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
genemark-At_03-proG-19.150-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GhirPA0301T082700.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
GhM_D03G1175.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gh_A03G087600.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
D12G22320.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
CotAD_43097Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Gohir.D12G185100.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gh_D03G0905Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GH_D03G1102Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gh_D12G198100.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghir_A12G019300.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
genemark-At_03-g-19.150-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
mk-Dt_12-augustus-gene-11.151-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghicr24_D12G197200.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gh_D03G109400.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
A12G22350.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gohir.D03G096300.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
D03G11610.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gh_D12G1801Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
A03G09060.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Ghir_D12G019550.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ghi_D12G11561.geneGhi_D12G11561.gene_WHU-TM1_v1Gossypium hirsutumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ghi_D12G11561.CDS1Ghi_D12G11561.CDS1_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D12G11561.CDS2Ghi_D12G11561.CDS2_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D12G11561.CDS3Ghi_D12G11561.CDS3_WHU-TM1_v1Gossypium hirsutumCDS
Ghi_D12G11561.CDS4Ghi_D12G11561.CDS4_WHU-TM1_v1Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ghi_D12G11561Ghi_D12G11561_WHU-TM1_v1-proteinGossypium hirsutumpolypeptide
Ghi_D12G11561_WHU-TM1_v1Ghi_D12G11561_WHU-TM1_v1Gossypium hirsutumpolypeptide


InterPro
Analysis Name: InterProScan Analysis for WHU_v1_a1 Gossypium hirsutum proteins
Date Performed: 2020-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainPFAMPF07983X8coord: 25..95
e-value: 4.9E-21
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..164
NoneNo IPR availablePANTHERPTHR31044FAMILY NOT NAMEDcoord: 3..204
NoneNo IPR availablePANTHERPTHR31044:SF25PLASMODESMATA CALLOSE-BINDING PROTEIN 2-RELATEDcoord: 3..204

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ghi_D12G11561_WHU-TM1_v1 ID=Ghi_D12G11561_WHU-TM1_v1; Name=Ghi_D12G11561; organism=Gossypium hirsutum; type=mRNA; length=630bp
ATGGCTGCTACTTTAGTGTTTGCACTGCTCATTCTTGCCATCACTGCAGG
CCACTCAAGTGGTGCGACGGGCAAATGGTGTGCTTGCAAAGATGGTGTGG
GTGATGGAAACTTGCAGAAGACATTGGACTATGCTTGTGGAAACGGTGCT
GACTGTAACCCTATCCGTTCAAATGGACCTTGTTACAACCCCAACACTGT
TAAAGCACATTGCAATTATGCTGTTAACAGCTATTTCCAAAAAAAAGGCC
AAGGTCAAGGCTCCTGTGAATTTGCTGGCACGGCAGCCATCACTACAACT
GACCCTAGCTCTGCTGGCTGTTCTTACCCCTCCAGTGCCAGTGGCGGAGG
CACGACCTTAACACCAACAACACCGGGCACGACAACAACTCCATCATCAT
CAACAACCACCACGCCCTCCATCATGACCCCAGGCACCAACACCCCAACA
AGCACTACCCCCTACAGTTCAACAACACCCACCGGAGTGTTAGGAGGAGT
CGGCACCGGCTTAGGCCCATCCGGAACCACCTCCACCAACACTGATTACA
GCCACGGAGGATTCCGGCTCCAACCCATTTCTTCCTTCACAACCCTCCTG
TTTTCAGGCTTCATGCTGATTTGGGGTTGA
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protein sequence of Ghi_D12G11561_WHU-TM1_v1

>Ghi_D12G11561_WHU-TM1_v1 ID=Ghi_D12G11561_WHU-TM1_v1; Name=Ghi_D12G11561_WHU-TM1_v1; organism=Gossypium hirsutum; type=polypeptide; length=210bp
MAATLVFALLILAITAGHSSGATGKWCACKDGVGDGNLQKTLDYACGNGA
DCNPIRSNGPCYNPNTVKAHCNYAVNSYFQKKGQGQGSCEFAGTAAITTT
DPSSAGCSYPSSASGGGTTLTPTTPGTTTTPSSSTTTTPSIMTPGTNTPT
STTPYSSTTPTGVLGGVGTGLGPSGTTSTNTDYSHGGFRLQPISSFTTLL
FSGFMLIWG*
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mRNA from alignment at D12:59175530..59179490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ghi_D12G11561_WHU-TM1_v1 ID=Ghi_D12G11561_WHU-TM1_v1; Name=Ghi_D12G11561; organism=Gossypium hirsutum; type=mRNA; length=3961bp; location=Sequence derived from: D12:59175530..59179490+ (Gossypium hirsutum
ATGGCTGCTACTTTAGTGTTTGCACTGCTCATTCTTGCCATCACTGCAGG
CCACTCAAGTAAGCTCTTGATATTATAGCTCTTTTTTTTTTTTGCAAAAG
CCATTCTATATTTTCATTTTCTTCTTCTACTTGACTTCTTTTTTTTTTTT
CAACTAAATATTCCTCTGTTTTTATCCCTTAAAAGATGAAGTATAAAAGA
GATTTGATATTATCCCATGTTGGGTGCATCTTGTTTACCTGTTTTCTTTT
TTGGTCTGAAATATGTAGTAATATTTTCTTCCATTTTTCCTCTTTAAGCT
ACTAATCCTTTTAATGCAACCCAAAACTACTACTTTAAACAGCCTCATTC
ATTATTTTTTCTTGCTTATTTTTCCTGCTTGAGACCCCCTCCTCCACCTA
AGCAAAACCCCTTTATGTTCCCCATGTAATACCTCAAAAACAGTCCCCCC
CCCTTTTTTTCTCTTTGAAAATGACTACATTTGTTCCTTTTTTTCCCTGG
ACAAACGAGACTAAAATTGTATTTTTTAGCAGGTGGTGCGACGGGCAAAT
GGTGTGCTTGCAAAGATGGTGTGGGTGATGGAAACTTGCAGAAGACATTG
GACTATGCTTGTGGAAACGGTGCTGACTGTAACCCTATCCGTTCAAATGG
ACCTTGTTACAACCCCAACACTGTTAAAGCACATTGCAATTATGCTGTTA
ACAGCTATTTCCAAAAAAAAGGCCAAGGTCAAGGCTCCTGTGAATTTGCT
GGCACGGCAGCCATCACTACAACTGACCCTAGTAATTTCCCTTCCCTTCC
CATCCATCTCTATTTTCTACTTATTATTTTTTTACCAAGGCAGTTAAAAA
GTTAAAAAATGAAGAGAAAAAAAAAATAAAAACTAAAACTTTATGTTTCT
TTGGTGATTCACAGGCTCTGCTGGCTGTTCTTACCCCTCCAGTGCCAGGT
ATGCTGTAAACTTTCCCTTTTAAACTGCTCATGTTTTATGCATTACTGTG
TGGTACTGAAGGAGTAGGCATTTAACACTATCAACACATAAAAGATTGGG
TACCTCCACTTATTAGGACTATTCACTTATGGTGCATTTGGACTATTAAT
TCTCTAACGTTTAAGGTCACTAAATGCCTTATTTTAGTGGTTGAGCCAAA
CAAAAAATGCTTCTTTAGGTGACAAGCTTTAGGGTTTATAATGTGTGATA
TAATAAAATGATAATGTTAACATTGATTCTACTACTACTTAAAAAATTAG
TGTTCAAATGCATTTAAGCAGATTTAACAAAATAGTGAAGATTGTAGTAC
CATGGGCTATGATATATTTATTTATATTTTGTTGGTCCACAACCAGATAT
TTAGTCTAAAGTTTTTATCAAAGTGGACCACTTAGTTAAGCAGAAAAGTA
AGGTTTGAACAAAAAAGGGGGTGTTTTTGCTTTTATTAGACTATTCGTGT
CTATTAAGTATATTTTTCAAATATAAAACTTAAATTTTGAATATAGTCCT
ATCAAACACTATTCCAACTGCTTATATATTTATATACACATTCTTGAGAT
TCCTGTTTAAATTTAAATTCCTGTCTATTACAGTCACATACTCTACTTCT
CTTGGGTGCAATGGCCATCCAACTGTCTAACATTGGAGCTGCTTCTTCTT
CTTCTTCTTTTTAACCTAAAAGAAAATCAAGTACTCGTCCACTGTTTTGA
ATGAGGCTTAGGGTGGGTTTGGATGGGCGGTGCGTTTAGCTGCGGTTAGT
GTAAAAACAGCGGTGGCGGTGAGATTAGATACTGTAGCGTTAGACAAAAA
GTAAGCTAAACGCACCGCACCGCACCCAATCGCCCATCCAAACCCACCCT
TATTCAAACACAAAAACCCAACACTTTGTCAACTTTTCTTTTTTATGCTT
TCACCTTTGATCATCTTCATTGGGCCATTTTATCTCTAATCGCCAACTTC
AAAAAAATGGCTCCACATCTAAGTGGTAAAGTTAAAAAGAGTGATGTAGC
ATTGCATTGTAGCTTTTCCCTTTTACTAAAAGAAAAAGAAATTCTCACTA
TTATTATTGGGATTAATGTCCCTTTTTCTATTTGATTGAACGGTGTAAAG
GGTTCCTACCTATCTTTACCCCTTTGCCCTTTAATTTGATGTATGATGCT
ATAATCTAAATAGAATAATTTAAATTCTTATGCCTACAAGACTAATATTA
TTTTTATTCAATTATATATTTAAAAAAACCTTAATTGTATAATAATTAAT
CCCACACCAAATATACCTCATGTTTTCACTAGAATAACTTACTCCAAAAT
GTTGAATGACCTTTTTTTCTTCTTTATTGCCCTAACTTTTGTTTTTATCT
GTTTGTTGAGTTCTTGTTTTAGTAACATGGGATCATGTTGCCATGTGCCA
CCACCAAAAATAATAAAAAATAGATTCGATATTTTTTTATTTATAAGTTT
TATACATATTTAAATTTTGATATGTTACAAAGTATATATGCTTATTTTAA
TTATGAAGAATTTTGGTGACGATGTATAATTTGGATAAAAAGAAAAGTGA
TTAGCACCTATTTCATGGTGGTGGGGTCCTATTGTTAGACTTTGAAATGG
ACAAATGTTTTTATAGAGATTAGAGCCGGTTTGTTTTCTTTTCTTTTCTC
TTTGAGATATGGAAAGCCTTGAGAGTTGTGCACATGTTGTCCTACACTAC
ACTATACACTTTGCTTCCGCCCATTTTATGGGACACCCTACTGTTGTTAC
CTTTTTTCCTTTTCTTTTCCTTTTATCTCTTTGGTTTTTCTTGCTTTAAA
GTTTTTAACCATGGTAAATAGCAAGCAGAAATCCTTATTCTGAATTTTGT
GGTTTAGACATGAAAAAGAGTTTTTGTAATATAATTAAAATTAATTAAGT
TTTTAATAAGAAATAGCTTTTGATTGGATCCATAAATAGAATTCAATTAA
ATTCTTGAAATATAATAATAAAAAAAGATTAAAAATATAGAAAACATTAA
TAAGTTATTAAAATAATTATACAAATTTTAGAAATTTATAATAAAGATAG
AAATTCATAAAGTTATTAAAAACTACTAATCATTATTAAAATATTATACT
CTTTTTTTCTTCTAAAAATTACCATCTTTTTTTGTTTTTCCCTCAAAACA
ATTTCCTACATGATGATACACCAACATTATTAAAATATTATTAATTGGAC
ATAAAGTTAGTTAGAAAATAATTTAAAAATTACTTCTTAAAATGTAATAA
ATATTATTAATTTATTATAATAATGTATTTTTCTTTTCATACTTTTTTTT
ATATAAAATCTTTAAATGAAACAATTAAATGTGTGGAAATTGAAGTCATT
TAAAGTGACAATGTCTGGTGAGTCTGCAAGTATAAATTACAGGTAAGTTA
AAGATGATAGAAGATGCTCAGAACGGAAATAATAACCTTCCTTTTGTGGG
TGAGAATCGATATAATCGATATACTATCTTATATGTTTGTCCTAATTGTG
TCGGCAAAGCTCAAATGAACTTGTCTAAGCCCACTTTATTTATACTTGTA
AGATTCTCTGCTCTGTATCATCTATTTATATTATACAAATTTTATTTAAA
CCGATAAAAATCATTACGTTATTATGAAAAAATTTGATGACACGGGCATA
TTTTGTCTTTTACTTGGATCAGTGGCGGAGGCACGACCTTAACACCAACA
ACACCGGGCACGACAACAACTCCATCATCATCAACAACCACCACGCCCTC
CATCATGACCCCAGGCACCAACACCCCAACAAGCACTACCCCCTACAGTT
CAACAACACCCACCGGAGTGTTAGGAGGAGTCGGCACCGGCTTAGGCCCA
TCCGGAACCACCTCCACCAACACTGATTACAGCCACGGAGGATTCCGGCT
CCAACCCATTTCTTCCTTCACAACCCTCCTGTTTTCAGGCTTCATGCTGA
TTTGGGGTTGA
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Coding sequence (CDS) from alignment at D12:59175530..59179490+

>Ghi_D12G11561_WHU-TM1_v1 ID=Ghi_D12G11561_WHU-TM1_v1; Name=Ghi_D12G11561; organism=Gossypium hirsutum; type=CDS; length=630bp; location=Sequence derived from: D12:59175530..59179490+ (Gossypium hirsutum
ATGGCTGCTACTTTAGTGTTTGCACTGCTCATTCTTGCCATCACTGCAGG
CCACTCAAGTGGTGCGACGGGCAAATGGTGTGCTTGCAAAGATGGTGTGG
GTGATGGAAACTTGCAGAAGACATTGGACTATGCTTGTGGAAACGGTGCT
GACTGTAACCCTATCCGTTCAAATGGACCTTGTTACAACCCCAACACTGT
TAAAGCACATTGCAATTATGCTGTTAACAGCTATTTCCAAAAAAAAGGCC
AAGGTCAAGGCTCCTGTGAATTTGCTGGCACGGCAGCCATCACTACAACT
GACCCTAGCTCTGCTGGCTGTTCTTACCCCTCCAGTGCCAGTGGCGGAGG
CACGACCTTAACACCAACAACACCGGGCACGACAACAACTCCATCATCAT
CAACAACCACCACGCCCTCCATCATGACCCCAGGCACCAACACCCCAACA
AGCACTACCCCCTACAGTTCAACAACACCCACCGGAGTGTTAGGAGGAGT
CGGCACCGGCTTAGGCCCATCCGGAACCACCTCCACCAACACTGATTACA
GCCACGGAGGATTCCGGCTCCAACCCATTTCTTCCTTCACAACCCTCCTG
TTTTCAGGCTTCATGCTGATTTGGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012946X8