Ghe12G09380, Ghe12G09380_WHU-A1_v1 (mRNA) Gossypium herbaceum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|17894 (AT2G36290.1 | alpha/beta-Hydrolases superfamily protein | Chr2:15208867-15210768 REVERSE LENGTH=364 | 201606) HSP 1 Score: 175.252 bits (443), Expect = 1.042e-53 Identity = 92/157 (58.60%), Postives = 104/157 (66.24%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDE---ALVSQDIQ-------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPP K+C S DG IT RIKLRD R LAYKEHGV ++ HK+I VHG SCRHD AL+S DI+ +SFDRP Y ESDP P + K LALDI+ + +IGYSMGG A W+ LKYIPHRLAG TLVAPVVNYWW F
Sbjct: 36 AIQPPPSKLCGSPDGPSITGPRIKLRDGRQLAYKEHGVPRDEATHKIIVVHGSDSCRHDNAFAALLSPDIKEGLGVYMVSFDRPGYAESDPDPNRTPKSLALDIEELADQLSLGSKFYVIGYSMGGQATWACLKYIPHRLAGVTLVAPVVNYWWKNF 192
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|17895 (AT2G36290.2 | alpha/beta-Hydrolases superfamily protein | Chr2:15208867-15210254 REVERSE LENGTH=350 | 201606) HSP 1 Score: 174.481 bits (441), Expect = 1.347e-53 Identity = 92/157 (58.60%), Postives = 104/157 (66.24%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDE---ALVSQDIQ-------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPP K+C S DG IT RIKLRD R LAYKEHGV ++ HK+I VHG SCRHD AL+S DI+ +SFDRP Y ESDP P + K LALDI+ + +IGYSMGG A W+ LKYIPHRLAG TLVAPVVNYWW F
Sbjct: 22 AIQPPPSKLCGSPDGPSITGPRIKLRDGRQLAYKEHGVPRDEATHKIIVVHGSDSCRHDNAFAALLSPDIKEGLGVYMVSFDRPGYAESDPDPNRTPKSLALDIEELADQLSLGSKFYVIGYSMGGQATWACLKYIPHRLAGVTLVAPVVNYWWKNF 178
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|11396 (AT1G74300.1 | alpha/beta-Hydrolases superfamily protein | Chr1:27935368-27936474 FORWARD LENGTH=346 | 201606) HSP 1 Score: 161.77 bits (408), Expect = 1.293e-48 Identity = 83/153 (54.25%), Postives = 102/153 (66.67%), Query Frame = 0
Query: 25 IQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHD---EALVSQDI-------QLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWW 157
++PPPP +C S G PITA RIKLRD R+LAYKE+G+ +E KHK++F+HG SCRHD L+S D+ +SFD+P YGESDP P + K LALDI+ + +IG SMGG A W LKY PHRLAG TLVAPVVNY+W
Sbjct: 24 LKPPPPNLCGSPGGPPITAPRIKLRDGRHLAYKEYGLPREKAKHKIVFIHGSDSCRHDAVFATLLSPDLVQERGVYMVSFDKPGYGESDPDPIRTPKSLALDIEELADQLSLGSKFYVIGKSMGGQAAWGCLKYTPHRLAGVTLVAPVVNYYW 176
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|11394 (AT1G74280.1 | alpha/beta-Hydrolases superfamily protein | Chr1:27929758-27931126 FORWARD LENGTH=372 | 201606) HSP 1 Score: 160.614 bits (405), Expect = 5.666e-48 Identity = 81/153 (52.94%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 25 IQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHD---EALVSQDI-------QLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWW 157
++PPPPK+C S G PITA RIKL+D RYLAYKEHG+ +E K++F+HG CRHD L+S D+ +SFDRP Y ESDPHP + + L DI+ + ++GYSMGG A W LKYIPHRLAG TLVAPVVNY+W
Sbjct: 41 LKPPPPKLCGSSGGPPITAPRIKLQDGRYLAYKEHGLPREKANRKIVFIHGSDCCRHDAVFATLLSPDLVEELGVYMVSFDRPGYCESDPHPSRTPRSLVSDIEELADQLSLGSKFYVLGYSMGGQAAWGCLKYIPHRLAGVTLVAPVVNYYW 193
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|27928 (AT3G54240.1 | alpha/beta-Hydrolases superfamily protein | Chr3:20080926-20082145 FORWARD LENGTH=350 | 201606) HSP 1 Score: 158.688 bits (400), Expect = 1.743e-47 Identity = 77/161 (47.83%), Postives = 105/161 (65.22%), Query Frame = 0
Query: 21 SILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
+I++I PPPPK C + G PITA RI+L D RYLAY+EHGV+++ K++F+H F++ R D A+++ ++ +S+DRP YGESDPH + K LA D++ + ++GYSMGG AVW LKYIPHRLAGATL+ PV N WWP F
Sbjct: 21 AIVSITPPPPKRCGTPGGPPITAPRIRLSDGRYLAYEEHGVSRQNATFKIVFIHAFSTFRRD-AVIANRVRPGFLEKNGIYVVSYDRPGYGESDPHSSRNEKTLAHDVEQLADQLQLGSKFYVVGYSMGGQAVWGVLKYIPHRLAGATLLCPVTNSWWPSF 180
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|11395 (AT1G74290.1 | alpha/beta-Hydrolases superfamily protein | Chr1:27931836-27934268 FORWARD LENGTH=371 | 201606) HSP 1 Score: 150.214 bits (378), Expect = 4.947e-44 Identity = 80/155 (51.61%), Postives = 98/155 (63.23%), Query Frame = 0
Query: 25 IQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHD---EALVSQDI-------QLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWS--FLKYIPHRLAGATLVAPVVNYWW 157
++PP PK+C S G PITA RIKL+D RYLAYKEHG+ +E K++F+HG CRHD L+S D+ +SFDRP Y ESDPHP + + L DI+ + +IG SMGG A W LKYIPHRLAG TLVAPVVNY+W
Sbjct: 41 LKPPQPKLCGSSSGPPITAPRIKLQDGRYLAYKEHGLPREKANRKIVFIHGSDCCRHDAVFATLLSPDLVEELGVYMVSFDRPGYCESDPHPSRTPRSLVSDIEELDDQLSLGSKFYVIGKSMGGQAAWGCLNLKYIPHRLAGVTLVAPVVNYYW 195
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|40936 (AT5G22460.3 | alpha/beta-Hydrolases superfamily protein | Chr5:7443659-7445269 REVERSE LENGTH=340 | 201606) HSP 1 Score: 141.354 bits (355), Expect = 8.003e-41 Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIFLQTYLKK 167
+ +PPPP+IC +G P+T+ RIKL D RYLAY+E GV ++ +K+I VHGF S + E + +D+ + +DR YGESDPHP + +K A DIQ + ++G S+G ++V+S LKYIPHRLAGA L+ P VNYWW Q L K
Sbjct: 20 SFKPPPPRICGHPNGPPVTSPRIKLSDGRYLAYRESGVDRDNANYKIIVVHGFNSSKDTEFPIPKDVIEELGIYFVFYDRAGYGESDPHPSRTVKSEAYDIQELADKLKIGPKFYVLGISLGAYSVYSCLKYIPHRLAGAVLMVPFVNYWWTKVPQEKLSK 180
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|40935 (AT5G22460.2 | alpha/beta-Hydrolases superfamily protein | Chr5:7443659-7445269 REVERSE LENGTH=340 | 201606) HSP 1 Score: 141.354 bits (355), Expect = 8.003e-41 Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIFLQTYLKK 167
+ +PPPP+IC +G P+T+ RIKL D RYLAY+E GV ++ +K+I VHGF S + E + +D+ + +DR YGESDPHP + +K A DIQ + ++G S+G ++V+S LKYIPHRLAGA L+ P VNYWW Q L K
Sbjct: 20 SFKPPPPRICGHPNGPPVTSPRIKLSDGRYLAYRESGVDRDNANYKIIVVHGFNSSKDTEFPIPKDVIEELGIYFVFYDRAGYGESDPHPSRTVKSEAYDIQELADKLKIGPKFYVLGISLGAYSVYSCLKYIPHRLAGAVLMVPFVNYWWTKVPQEKLSK 180
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|40934 (AT5G22460.1 | alpha/beta-Hydrolases superfamily protein | Chr5:7443659-7445269 REVERSE LENGTH=340 | 201606) HSP 1 Score: 141.354 bits (355), Expect = 8.003e-41 Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIFLQTYLKK 167
+ +PPPP+IC +G P+T+ RIKL D RYLAY+E GV ++ +K+I VHGF S + E + +D+ + +DR YGESDPHP + +K A DIQ + ++G S+G ++V+S LKYIPHRLAGA L+ P VNYWW Q L K
Sbjct: 20 SFKPPPPRICGHPNGPPVTSPRIKLSDGRYLAYRESGVDRDNANYKIIVVHGFNSSKDTEFPIPKDVIEELGIYFVFYDRAGYGESDPHPSRTVKSEAYDIQELADKLKIGPKFYVLGISLGAYSVYSCLKYIPHRLAGAVLMVPFVNYWWTKVPQEKLSK 180
BLAST of Ghe12G09380 vs. Araport11
Match: gnl|BL_ORD_ID|26890 (AT3G48410.1 | alpha/beta-Hydrolases superfamily protein | Chr3:17925786-17928100 REVERSE LENGTH=385 | 201606) HSP 1 Score: 137.887 bits (346), Expect = 3.911e-39 Identity = 71/154 (46.10%), Postives = 93/154 (60.39%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVS-------QDIQL---SFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWW 157
IQPPP KI S G +T+ RIKLRD R+LAY E G+ ++ K K+I +HGF SC D + +++++ SFDRP YGESDP+ + +ALDI+ + + GYSMGG W+ L YIPHRLAGA LVAP +NYWW
Sbjct: 51 TIQPPPAKIVGSPGGPTVTSPRIKLRDGRHLAYTEFGIPRDEAKFKIINIHGFDSCMRDSHFANFLSPALVEELRIYIVSFDRPGYGESDPNLNGSPRSIALDIEELADGLGLGPQFYLFGYSMGGEITWACLNYIPHRLAGAALVAPAINYWW 204
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1269976912|ref|XP_022739128.1| (uncharacterized protein LOC111291597 [Durio zibethinus]) HSP 1 Score: 202.986 bits (515), Expect = 2.382e-61 Identity = 101/157 (64.33%), Postives = 115/157 (73.25%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ----------DIQLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPP PKIC S DG P+TA RI LRD R+LAYKEHG+ KEM KHK+IFVHGF+SCRHDE +V++ SFDRP YGESDP P++ LK LALDI+ + IIGYSMGGHAVWS LKYIPHRLAGATL+APV+NYWWP F
Sbjct: 20 AIQPPAPKICGSPDGPPVTATRITLRDGRHLAYKEHGIPKEMAKHKIIFVHGFSSCRHDEVIVTRLSPEVVEELGIYSASFDRPGYGESDPDPRRTLKSLALDIEELADQLGLGPKFYIIGYSMGGHAVWSCLKYIPHRLAGATLLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|508727239|gb|EOY19136.1| (Catalytic, putative isoform 1 [Theobroma cacao] >gi|508727240|gb|EOY19137.1| Catalytic, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 199.134 bits (505), Expect = 8.512e-60 Identity = 99/157 (63.06%), Postives = 117/157 (74.52%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ-DIQL---------SFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S G P+TA RIKLRD R+LAYKEHG++KEM KHK+IFVHGF+SCRHDE +V+ ++L SFDRP YGESDP P++ LK LALDI+ + IIG+SMGG +VW LKYIPHRLAGATL+APV+NYWWP F
Sbjct: 20 AIQPPPPKICGSPGGPPVTATRIKLRDGRHLAYKEHGLSKEMAKHKIIFVHGFSSCRHDEVIVANLSLELVEELGVYCVSFDRPGYGESDPDPRRTLKSLALDIEELADQLRLGPKFYIIGFSMGGQSVWGCLKYIPHRLAGATLLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1063524534|ref|XP_007010326.2| (PREDICTED: uncharacterized protein LOC18586733 [Theobroma cacao] >gi|1063524536|ref|XP_007010327.2| PREDICTED: uncharacterized protein LOC18586733 [Theobroma cacao]) HSP 1 Score: 197.978 bits (502), Expect = 2.679e-59 Identity = 98/157 (62.42%), Postives = 116/157 (73.89%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ-DIQL---------SFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S G P+T RIKLRD R+LAYKEHG++KEM KHK+IFVHGF+SCRHDE +V+ ++L SFDRP YGESDP P++ LK LALDI+ + IIG+SMGG +VW LKYIPHRLAGATL+APV+NYWWP F
Sbjct: 20 AIQPPPPKICGSPGGPPVTVTRIKLRDGRHLAYKEHGLSKEMAKHKIIFVHGFSSCRHDEVIVANLSLELVEELGVYSVSFDRPGYGESDPDPRRTLKSLALDIEELADQLRLGPKFYIIGFSMGGQSVWGCLKYIPHRLAGATLLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1137210558|gb|OMO79084.1| (putative catalytic [Corchorus olitorius]) HSP 1 Score: 192.971 bits (489), Expect = 2.355e-57 Identity = 95/157 (60.51%), Postives = 112/157 (71.34%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ----------DIQLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AI PPPPKIC S G P+TA RIKLRD R+LAY+E GV+KE+ KHK IFVHGF+SCRHDE +VS+ LSFD+P YGESDP P++ +K L LDI+ + +IGYSMGGHAVW LKYIPHRLAGA L+APV+NYWWP F
Sbjct: 20 AILPPPPKICGSPGGPPVTATRIKLRDGRHLAYRELGVSKEIAKHKFIFVHGFSSCRHDEVIVSRLSPEVVEELGVYSLSFDKPGYGESDPDPRRTMKSLTLDIEELADQLGLGSKFYVIGYSMGGHAVWGCLKYIPHRLAGAALLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1063524538|ref|XP_017984447.1| (PREDICTED: uncharacterized protein LOC108663681 [Theobroma cacao]) HSP 1 Score: 191.43 bits (485), Expect = 9.289e-57 Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVS-------QDI---QLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPK+C S P+TA RIKLRD R+LAYKEHG++KEM K K+IFVHGFASCRHDE +V+ +++ +SFD+P YGESDP P++ LK LALDI+ + IIG SMGG +VW LKYIPHRLAGATL+APV+NYWWP F
Sbjct: 20 AIQPPPPKVCGSPGSPPVTATRIKLRDGRHLAYKEHGLSKEMAKQKIIFVHGFASCRHDEVIVAYLPPEVVEELGVYSVSFDKPGYGESDPDPRRTLKSLALDIEELADQLRLGPKFYIIGISMGGQSVWGCLKYIPHRLAGATLLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1024052371|gb|KZV51603.1| (hypothetical protein F511_35106 [Dorcoceras hygrometricum]) HSP 1 Score: 190.274 bits (482), Expect = 2.865e-56 Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AI+PPPPKIC S DG P+TA+RIKL D RYLAYKE+GV +E KHK++F+HG SCRHD A+++ + +SFDRP YGESDPHP + LK LA DI+ + +IG+SMGG W+ LKYIPHRLAGA L+APVVNYWWP F
Sbjct: 20 AIRPPPPKICGSADGPPVTASRIKLNDGRYLAYKEYGVPQETAKHKIVFIHGINSCRHDAAVITASLSPDLVEGQGIYIVSFDRPGYGESDPHPSRTLKSLAFDIEELADQLGLGSKFYVIGFSMGGQMAWTCLKYIPHRLAGAVLLAPVVNYWWPGF 177
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1347716314|gb|PPS12888.1| (hypothetical protein GOBAR_AA07753 [Gossypium barbadense]) HSP 1 Score: 182.185 bits (461), Expect = 5.652e-56 Identity = 90/95 (94.74%), Postives = 90/95 (94.74%), Query Frame = 0
Query: 1 MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQLSFD 95
MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFA CRHDEALVS QLS D
Sbjct: 11 MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFAGCRHDEALVS---QLSLD 102
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1137227854|gb|OMO91922.1| (putative sodium bile acid cotransporter protein [Corchorus capsularis]) HSP 1 Score: 195.667 bits (496), Expect = 1.567e-55 Identity = 95/157 (60.51%), Postives = 111/157 (70.70%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ----------DIQLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S G P+TA RIKLRD R+LAY+E GV+KE+ KHK IFVHGF+SCRHDE +VS+ +SFD+P YGESDP P + K L LDI+ + +IGYSMGGHAVW LKYIPHRLAGA L+APV+NYWWP F
Sbjct: 347 AIQPPPPKICGSPGGPPVTATRIKLRDGRHLAYRELGVSKEIAKHKFIFVHGFSSCRHDEVIVSRLSPEVVEELGVYSVSFDKPGYGESDPDPGRTTKSLTLDIEELADQLGLGPKFYVIGYSMGGHAVWGCLKYIPHRLAGAALLAPVINYWWPGF 503
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1344129800|gb|PPE02141.1| (hypothetical protein GOBAR_DD00834 [Gossypium barbadense]) HSP 1 Score: 183.341 bits (464), Expect = 6.516e-55 Identity = 89/158 (56.33%), Postives = 112/158 (70.89%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPP PK C S DG P+TA+RIKL+D RYLAYKEHGV ++ K+K+++VHGF SCRHD A+V+ + +SFDRP YGESDP+PK+ ++ L LDI+ + +IG+SMGG +WS LKYIPHRLAGA L+APVVNYWWP F
Sbjct: 52 AIQPPIPKTCGSPDGPPVTASRIKLKDGRYLAYKEHGVPRDAAKYKIVYVHGFDSCRHD-AVVANTLSPEIVEALGVYIVSFDRPGYGESDPNPKRTVQSLPLDIEELADQLGLGSKFYVIGFSMGGQVIWSCLKYIPHRLAGAALLAPVVNYWWPGF 208
BLAST of Ghe12G09380 vs. NCBI nr
Match: gi|1336396924|gb|POF19600.1| (hypothetical protein CFP56_65260 [Quercus suber]) HSP 1 Score: 184.111 bits (466), Expect = 9.324e-55 Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
A QPPPPKIC S DG PITA RIKL D R+LAYKEHGV KE K++FVHGF SCRHD A++++ + +SFDRP YGESDP+PK+ +K +ALDI+ + +IG+SMGG +WS LKYIPHR+AGA L+APVVNYWWP F
Sbjct: 48 ATQPPPPKICGSPDGPPITAARIKLSDGRHLAYKEHGVPKEKANFKIVFVHGFDSCRHD-AVIAKTLSPEIVEELGIYVVSFDRPGYGESDPNPKRTVKSMALDIEELADQLGLGSKFYVIGFSMGGQVLWSCLKYIPHRVAGAGLLAPVVNYWWPGF 204
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A061FQ03_THECC (Catalytic, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_043901 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.150e-60 Identity = 99/157 (63.06%), Postives = 117/157 (74.52%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ-DIQL---------SFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S G P+TA RIKLRD R+LAYKEHG++KEM KHK+IFVHGF+SCRHDE +V+ ++L SFDRP YGESDP P++ LK LALDI+ + IIG+SMGG +VW LKYIPHRLAGATL+APV+NYWWP F
Sbjct: 20 AIQPPPPKICGSPGGPPVTATRIKLRDGRHLAYKEHGLSKEMAKHKIIFVHGFSSCRHDEVIVANLSLELVEELGVYCVSFDRPGYGESDPDPRRTLKSLALDIEELADQLRLGPKFYIIGFSMGGQSVWGCLKYIPHRLAGATLLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A1R3I942_9ROSI (Putative catalytic OS=Corchorus olitorius OX=93759 GN=COLO4_24554 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.978e-57 Identity = 95/157 (60.51%), Postives = 112/157 (71.34%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ----------DIQLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AI PPPPKIC S G P+TA RIKLRD R+LAY+E GV+KE+ KHK IFVHGF+SCRHDE +VS+ LSFD+P YGESDP P++ +K L LDI+ + +IGYSMGGHAVW LKYIPHRLAGA L+APV+NYWWP F
Sbjct: 20 AILPPPPKICGSPGGPPVTATRIKLRDGRHLAYRELGVSKEIAKHKFIFVHGFSSCRHDEVIVSRLSPEVVEELGVYSLSFDKPGYGESDPDPRRTMKSLTLDIEELADQLGLGSKFYVIGYSMGGHAVWGCLKYIPHRLAGAALLAPVINYWWPGF 176
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2Z7CXR3_9LAMI (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_35106 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.407e-56 Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AI+PPPPKIC S DG P+TA+RIKL D RYLAYKE+GV +E KHK++F+HG SCRHD A+++ + +SFDRP YGESDPHP + LK LA DI+ + +IG+SMGG W+ LKYIPHRLAGA L+APVVNYWWP F
Sbjct: 20 AIRPPPPKICGSADGPPVTASRIKLNDGRYLAYKEYGVPQETAKHKIVFIHGINSCRHDAAVITASLSPDLVEGQGIYIVSFDRPGYGESDPHPSRTLKSLAFDIEELADQLGLGSKFYVIGFSMGGQMAWTCLKYIPHRLAGAVLLAPVVNYWWPGF 177
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2P5YBA7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA07753 PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.748e-56 Identity = 90/95 (94.74%), Postives = 90/95 (94.74%), Query Frame = 0
Query: 1 MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQLSFD 95
MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFA CRHDEALVS QLS D
Sbjct: 11 MKELQVDISGIASATDDPNISILAIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFAGCRHDEALVS---QLSLD 102
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2N9H6U6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35704 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.905e-56 Identity = 93/158 (58.86%), Postives = 112/158 (70.89%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S DG P+TA RIKL D R+LAY EHGV KE KHK+++VHGF SCRHD A+V++ + +SFDRP YGESDP+PK+ +K +ALDI+ + +IG+SMGG +WS LKYIPHRLAGA L APVVNYWWP F
Sbjct: 52 AIQPPPPKICGSPDGPPVTAARIKLSDGRHLAYIEHGVPKETAKHKIVYVHGFDSCRHD-AVVAKTLSPEIVEELGIYVVSFDRPGYGESDPNPKRTVKSMALDIEELADQLGLGSKFYVIGFSMGGQVIWSCLKYIPHRLAGAGLFAPVVNYWWPGF 208
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A1R3JAR9_COCAP (Putative sodium bile acid cotransporter protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_06956 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.317e-55 Identity = 95/157 (60.51%), Postives = 111/157 (70.70%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQ----------DIQLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPPPPKIC S G P+TA RIKLRD R+LAY+E GV+KE+ KHK IFVHGF+SCRHDE +VS+ +SFD+P YGESDP P + K L LDI+ + +IGYSMGGHAVW LKYIPHRLAGA L+APV+NYWWP F
Sbjct: 347 AIQPPPPKICGSPGGPPVTATRIKLRDGRHLAYRELGVSKEIAKHKFIFVHGFSSCRHDEVIVSRLSPEVVEELGVYSVSFDKPGYGESDPDPGRTTKSLTLDIEELADQLGLGPKFYVIGYSMGGHAVWGCLKYIPHRLAGAALLAPVINYWWPGF 503
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2P5SSY8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD00834 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 5.474e-55 Identity = 89/158 (56.33%), Postives = 112/158 (70.89%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
AIQPP PK C S DG P+TA+RIKL+D RYLAYKEHGV ++ K+K+++VHGF SCRHD A+V+ + +SFDRP YGESDP+PK+ ++ L LDI+ + +IG+SMGG +WS LKYIPHRLAGA L+APVVNYWWP F
Sbjct: 52 AIQPPIPKTCGSPDGPPVTASRIKLKDGRYLAYKEHGVPRDAAKYKIVYVHGFDSCRHD-AVVANTLSPEIVEALGVYIVSFDRPGYGESDPNPKRTVQSLPLDIEELADQLGLGSKFYVIGFSMGGQVIWSCLKYIPHRLAGAALLAPVVNYWWPGF 208
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2P4MQ23_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_65260 PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.833e-55 Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ-----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
A QPPPPKIC S DG PITA RIKL D R+LAYKEHGV KE K++FVHGF SCRHD A++++ + +SFDRP YGESDP+PK+ +K +ALDI+ + +IG+SMGG +WS LKYIPHR+AGA L+APVVNYWWP F
Sbjct: 48 ATQPPPPKICGSPDGPPITAARIKLSDGRHLAYKEHGVPKEKANFKIVFVHGFDSCRHD-AVIAKTLSPEIVEELGIYVVSFDRPGYGESDPNPKRTVKSMALDIEELADQLGLGSKFYVIGFSMGGQVLWSCLKYIPHRVAGAGLLAPVVNYWWPGF 204
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2R6QW24_ACTCH (Lysophospholipase BODYGUARD 2 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13430 PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.330e-54 Identity = 91/155 (58.71%), Postives = 113/155 (72.90%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHD---EALVSQDI-------QLSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWP 158
AIQPPPPKIC S DG P+TA RIKL D R+LAYKEHGV K+ K+K+++VHGF +CRHD + +S DI +SFDRP YGESDP+PK+ LK +ALDI+ + ++G+SMGG +W+ LKYIPHRLAGATL+APVVNYWWP
Sbjct: 52 AIQPPPPKICGSADGPPVTAPRIKLSDGRHLAYKEHGVPKDKAKYKIVYVHGFDTCRHDAVTDTQLSPDIIEGLGVYIVSFDRPGYGESDPNPKRTLKSMALDIEELADQLGLGSKFYVVGFSMGGQVIWTCLKYIPHRLAGATLIAPVVNYWWP 206
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Match: A0A2P6SBS3_ROSCH (Putative dihydrolipoyllysine-residue acetyltransferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0332431 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.331e-54 Identity = 91/157 (57.96%), Postives = 109/157 (69.43%), Query Frame = 0
Query: 24 AIQPPPPKICESLDGAPITANRIKLRDERYLAYKEHGVAKEMEKHKLIFVHGFASCRHDEALVSQDIQ----------LSFDRPRYGESDPHPKQILKILALDIQS----------YLIIGYSMGGHAVWSFLKYIPHRLAGATLVAPVVNYWWPIF 160
A QPPPPKIC S G PITA RIKLRD RYLAYKEHGV+K++ ++K+IFVHGF S RHD + ++ +S DRP YGESDP PK+ +K LALDI+ + ++GYSMGG +WS L+YIPHRLAGATL APVVNYWWP F
Sbjct: 20 ATQPPPPKICGSPGGPPITAPRIKLRDGRYLAYKEHGVSKQVARYKIIFVHGFGSSRHDAVIATKPSAEFIEELGVHIVSLDRPGYGESDPDPKRTVKSLALDIEELADQLGFGSKFYVVGYSMGGQVIWSCLQYIPHRLAGATLYAPVVNYWWPGF 176 The following BLAST results are available for this feature:
BLAST of Ghe12G09380 vs. ExPASy Swiss-Prot
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt Swissprot) Total hits: 0
BLAST of Ghe12G09380 vs. Araport11
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs arabidopsis Araport11) Total hits: 10
BLAST of Ghe12G09380 vs. NCBI nr
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs NCBI nr) Total hits: 10
BLAST of Ghe12G09380 vs. ExPASy TrEMBL
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan WHU_v1_a1 Gossypium herbaceum proteins
Date Performed: 2020-04-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ghe12G09380_WHU-A1_v1 ID=Ghe12G09380_WHU-A1_v1; Name=Ghe12G09380; organism=Gossypium herbaceum; type=mRNA; length=567bpback to top protein sequence of Ghe12G09380_WHU-A1_v1 >Ghe12G09380_WHU-A1_v1 ID=Ghe12G09380_WHU-A1_v1; Name=Ghe12G09380_WHU-A1_v1; organism=Gossypium herbaceum; type=polypeptide; length=188bpback to top mRNA from alignment at Chr12:34690988..34692559- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Ghe12G09380_WHU-A1_v1 ID=Ghe12G09380_WHU-A1_v1; Name=Ghe12G09380; organism=Gossypium herbaceum; type=mRNA; length=1572bp; location=Sequence derived from: Chr12:34690988..34692559- (Gossypium herbaceumback to top Coding sequence (CDS) from alignment at Chr12:34690988..34692559- >Ghe12G09380_WHU-A1_v1 ID=Ghe12G09380_WHU-A1_v1; Name=Ghe12G09380; organism=Gossypium herbaceum; type=CDS; length=567bp; location=Sequence derived from: Chr12:34690988..34692559- (Gossypium herbaceumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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