Gh_A12G142100.1, Gh_A12G142100.1_CRI-TM1_v1 (mRNA) Gossypium hirsutum

Transcript Overview
NameGh_A12G142100.1
Unique NameGh_A12G142100.1_CRI-TM1_v1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A12chromosomeA12:81421540..81422218 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ghtrbR0517Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghtrbR0533Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghtrbR0591Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghtrbR0647Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghtrbR0670Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
ghtrjR0296Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghtrjR0340Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghtrjR0344Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghtrjR0366Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghtrjR0393Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
ghthnR0535Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthnR0584Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthnR0617Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthnR0634Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthnR0682Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthnR0692Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
ghthzR0449Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthzR0464Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthbR0663Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthzR0503Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthzR0525Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthbR0746Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthzR0542Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthbR0760Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthbR0762Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthbR0783Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthbR0793Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthbR0813Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthbR0841Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
ghthzR0583Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ghthjR0497Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0512Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0561Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0586Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0603Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0645Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghthjR0655Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
ghtghtL0313Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtgrbR0389Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghtgrbR0410Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghtgkR0343Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtgkR0383Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtgrbR0470Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghtgkR0396Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtgtbR0386Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghtgrbR0478Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghtgkR0406Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtgkR0423Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghtgtbR0408Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghtghtR0560Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtghtR0584Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtghtR0602Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtgtbR0482Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghtgtbR0487Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghtgtbR0500Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
ghtghtR0648Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtghtR0659Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghtghzR0403Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0422Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0460Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0471Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0504Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0544Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghtghzR0554Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
abghtL0440Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
acghtL0424Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
acghtL0633Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
bhghtL0451Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
abghtL2421Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
bhghtL0683Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhghtL0721Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
ghghtL0257Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghghtL0466Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
bzghtL0267Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gbghtL0278Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbghtL0483Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bzghtL0451Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
acghtL1819Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
bhghtL2737Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
ghghtL1641Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbghtL1673Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhghtL3883Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bzghtL1576Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
ghghtL2208Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbghtL2287Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghghtL2408Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
bzghtL2149Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gbghtL2479Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhghtL5349Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhghtL5351Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bzghtL2323Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
ghghtL3243Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbghtL3348Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bzghtL3103Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
adghtL0286Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghtL0505Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghtL1734Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghtL2308Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghtL2505Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adghtL3361Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
ghthgsR0408Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghthgsR0422Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghthgsR0469Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghthgsR0489Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghthgsR0506Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghthgsR0543Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ghttoR0396Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0413Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0454Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0477Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0493Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0530Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ghttoR0541Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdghtL0279Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghtL0479Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghtL1699Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghtL2298Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghtL2499Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdghtL3332Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
fnghtL0299Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
fnghtL0495Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
fnghtL1470Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dtghtL0010Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dtghtL0238Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
dtghtL0524Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
ghthwR0398Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghthwR0422Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghthwR0488Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ghthwR0503Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
awghtL0299Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awghtL0489Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awghtL1447Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
ghttwR0480Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0497Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0537Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0556Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0573Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0611Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghttwR0622Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ghtuhR0376Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0391Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0430Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0449Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0467Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0506Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ghtuhR0514Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dttghtL0010Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dttghtL0609Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dttghtL0749Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
dtoghtL0011Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dtoghtL0586Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dtoghtL0720Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dfightL0010Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfightL0110Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dfightL0243Gossypium aridum (D4) genome ISU_v1Gossypium aridum
ghtgtiR0395Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghtgtiR0446Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghtgtiR0451Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghtgtiR0482Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
ghtgtiR0506Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
drightL0011Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
drightL1033Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
drightL1174Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
dsightL0079Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dsightL0081Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dsightL0318Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dsightL0424Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dsightL0923Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dqightL0132Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqightL0273Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqightL0395Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqightL1228Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
ghtndmR0463Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0478Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0517Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0541Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0558Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0601Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ghtndmR0611Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barghtL0266Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghtL0447Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghtL1502Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghtL2041Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghtL2203Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barghtL2956Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbghtL0271Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghtL0442Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghtL1496Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghtL2030Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghtL2213Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbghtL2955Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
ghtjmbR0474Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0489Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0531Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0553Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0570Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0613Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtjmbR0621Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ghtpscR0464Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0482Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0523Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0548Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0565Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0605Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ghtpscR0613Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyghtL0286Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghtL0478Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghtL1572Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghtL2122Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghtL2298Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyghtL3065Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
ghthpfR0449Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0465Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0501Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0523Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0538Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0575Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
ghthpfR0587Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
D5.v1.pred_00034888-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
rna-gnl|WGS:VKDL|Gobar.A07G139900.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
rna-gnl|WGS:JABFAA|Goari_00025319-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
gene-E1A91_D11G123200v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
GB_A12G1488Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
rna-gnl|WGS:JABEZY|Gogos_00010278-RAGossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
rna-gnl|WGS:VKDL|Gobar.D11G119700.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
rna-gnl|WGS:JABFAD|Gohar_00013864-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
Gorai.001G144300.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
gene-E1A91_A07G141600v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS_VKGI|Godar.A12G144000.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
rna-gnl|WGS:JABEZZ|Gorai_00009039-RAGossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
Kirkii_Juiced.00g181630.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
Ghe07G15540Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
gene-E1A91_A11G121000v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS:JABEZX|Golob_00028297-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
rna-gnl|WGS_VKGE|Gotom.A07G149400.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS_VKGI|Godar.D12G152200.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Golon.011G123200-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
EVM0040549.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS:VKDL|Gobar.D12G143300.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
rna-gnl|WGS:JABFAD|Gohar_00006237-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
rna-gnl|WGS_VKGI|Godar.D11G126700.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Gbscaffold5811.7.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gene-E1A91_D12G144800v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gbscaffold2424.56.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Cotton_D_gene_10028600Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Ghe11G12660Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Cotton_A_22048Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
rna-gnl|WGS_VKGI|Godar.D07G152400.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gene-E1A91_A12G135300v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS_VKGE|Gotom.D11G124500.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
TURN.07g190210.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
rna-gnl|WGS:VKDL|Gobar.A12G133200.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
TURN.01g307840.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
EVM_prediction_Ga11G2896Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Ghe12G16750Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
rna-gnl|WGS_VKGE|Gotom.D07G149900.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gar12G16860Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
rna-gnl|WGS:JABFAE|Goarm_00005354-RAGossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
Gar07G15970Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
Gbar_D07G014030.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
rna-gnl|WGS_VKGE|Gotom.D12G151800.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gbscaffold792.16.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
rna-gnl|WGS_VKGI|Godar.A07G149600.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Gbar_D12G013560.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
GB_A11G1151Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
GB_D07G1398Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
rna-gnl|WGS:JABEZY|Gogos_00023955-RAGossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
EVM_prediction_Ga07G1435Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
mikado.F12G4326.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
rna-gnl|WGS:JABFAA|Goari_00006005-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
Gar11G12190Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
Gorai.007G122700.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS:JABEZZ|Gorai_00005470-RAGossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
Gbscaffold1607.13.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Gorai.008G139400.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
gene-E1A91_D07G146900v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Kirkii_Juiced.00g298490.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
rna-gnl|WGS:JABFAA|Goari_00013433-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
TURN.02g348990.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
rna-gnl|WGS:JABFAD|Gohar_00035408-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
GB_D12G1479Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Cotton_D_gene_10027224Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
EVM_prediction_Ga12G1655Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Gothu.00033156-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
rna-gnl|WGS:VKDL|Gobar.D07G143000.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Cotton_D_gene_10035834Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
rna-gnl|WGS:JABEZX|Golob_00013421-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
EVM0014516.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS_VKGE|Gotom.A12G144900.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
GB_D11G1183Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gbar_A07G013580.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
rna-gnl|WGS:JABEZX|Golob_00005968-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
Cotton_A_26371Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
Gbar_D11G011980.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
GB_A07G1396Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gbar_A12G013550.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Kirkii_Juiced.00g356120.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
EVM0031434.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS_VKGI|Godar.A11G125500.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Golon.007G151000-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
GH_D11G01175_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
maker-Dt_11-Msloci-g-64.1218-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GH_A12G01397_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GhirPA1201T159600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gohir.D07G133000.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GH_D07G1386Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gh_D07G137200.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghir_A11G011750.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
GhM_A07G1566.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GhM_D07G1532.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gh_A07G1172Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
maker-At_12_GB713_Mikado_sloci-g-24.61-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
D12G16290.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gohir.D11G114400.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GH_A07G1399Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Ghicr24_A11G118900.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
GhirPD0701T116700.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
maker-Dt_12-Msloci-g-22.1071-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Ghi_D12G08531Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
mk-At_12_Mikado_84.229-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
aug_m-At_07-proG-27.33-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Gh_D12G1258Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
augustus_masked-Dt_07_GB713-gene-40.315-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gh_D11G1146Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gh_A07G138000.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghi_D07G07051Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GhM_D11G1286.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
CotAD_25751Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
CotAD_33748Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Gh_D12G142000.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
GhM_D12G1578.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gohir.D07G133000.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Ghir_D12G013650.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Ghir_D11G011720.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Ghicr24_A07G139900.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
GH_D11G1173Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GH_A07G01400_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Ghir_D07G013890.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
maker-At_12-Msloci-g-84.229-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Ghicr24_D07G134100.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gohir.D11G114400.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Gh_A11G116200.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghicr24_A12G139500.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
maker-Dt_12_GB713_Mikado_sloci-g-19.486-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
GhM_A12G1622.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
CotAD_43673Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
A12G15960.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GH_D12G1432Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Gh_D11G118100.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Gohir.A07G128600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GhirPA0701T109600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Ghi_A12G07746Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
augustus_masked-At_07_GB713-gene-27.62-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Ghi_A07G07436Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Gh_D07G1272Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
D07G14390.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gohir.A12G124700.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
mk-Dt_12_Mikado_22.1071-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghi_D11G06231Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
A11G11970.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GhirPD1201T156800.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gohir.D12G128600.2Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
snap_masked-Dt_11_GB713-gene-10.339-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
aug_masked-Dt_07-g-40.404-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
Gh_A12G1130Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GH_A12G1415Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
D11G12100.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
aug_m-Dt_07-proG-40.404-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
Ghicr24_D12G138500.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
mk-Dt_11_Mikado_64.1218-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GhirPD1101T118900.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Ghir_A12G013420.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
aug_masked-At_07-g-27.33-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
A07G14750.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
CotAD_57940Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
GH_D07G01363_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gohir.A12G124700.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gohir.D12G128600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GH_D12G01432_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gohir.A07G128600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Gh_A12G142100Gh_A12G142100_CRI-TM1_v1Gossypium hirsutumgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gh_A12G142100.1-five_prime_UTR1Gh_A12G142100.1-five_prime_UTR1_CRI-TM1_v1Gossypium hirsutumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gh_A12G142100.1-exon1Gh_A12G142100.1-exon1_CRI-TM1_v1Gossypium hirsutumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gh_A12G142100.1-CDS1Gh_A12G142100.1-CDS1_CRI-TM1_v1Gossypium hirsutumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gh_A12G142100.1-three_prime_UTR1Gh_A12G142100.1-three_prime_UTR1_CRI-TM1_v1Gossypium hirsutumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Gh_A12G142100.1Gh_A12G142100.1_CRI-TM1_v1-proteinGossypium hirsutumpolypeptide
Gh_A12G142100.1_CRI-TM1_v1Gh_A12G142100.1_CRI-TM1_v1Gossypium hirsutumpolypeptide


Homology
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1028972095|ref|XP_016729496.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Gossypium hirsutum] >gi|1050627129|ref|XP_017636484.1| PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Gossypium arboreum])

HSP 1 Score: 248.054 bits (632), Expect = 2.719e-83
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1347719233|gb|PPS15531.1| (hypothetical protein GOBAR_AA05057 [Gossypium barbadense])

HSP 1 Score: 245.743 bits (626), Expect = 2.553e-82
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVS MKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSAMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|823209510|ref|XP_012437971.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Gossypium raimondii] >gi|763782753|gb|KJB49824.1| hypothetical protein B456_008G139400 [Gossypium raimondii] >gi|1344117893|gb|PPD90908.1| hypothetical protein GOBAR_DD12144 [Gossypium barbadense])

HSP 1 Score: 245.358 bits (625), Expect = 3.748e-82
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPR IANGPDVPT+KVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRTIANGPDVPTLKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1029114447|ref|XP_016735669.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Gossypium hirsutum])

HSP 1 Score: 246.128 bits (627), Expect = 7.400e-82
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPR IANGPDVPT+KVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVA WDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:   40 MATLSSVNLVTPRTIANGPDVPTLKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAVWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 161          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1269894005|ref|XP_022757890.1| (calvin cycle protein CP12-1, chloroplastic-like [Durio zibethinus])

HSP 1 Score: 189.119 bits (479), Expect = 8.728e-60
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRVSPMKLR----VGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSS+NLVTPR++AN PD      VKVP +N+PWKR+S +  R    + PVRAAPD ISEKVEKSIKEAQE CSDDPASGEC AAWDEVEE+SAAA HARD+KK++DPLENYCKDNPE +ECRTYDN
Sbjct:    1 MATLSSLNLVTPRVVANVPDSTKGSPVKVPYVNQPWKRLSQLASRRMQVIRPVRAAPDSISEKVEKSIKEAQEACSDDPASGECAAAWDEVEEISAAAGHARDRKKENDPLENYCKDNPEAEECRTYDN 129          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1137248651|gb|OMP06522.1| (hypothetical protein CCACVL1_01531 [Corchorus capsularis])

HSP 1 Score: 188.734 bits (478), Expect = 1.063e-59
Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPD---VPTVKVPCLNRPWKRVSPMKLR----VGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK-DDDPLENYCKDNPETDECRTYDN 122
            MATLSS+NLVTPR++AN PD   V  VKVPCLN+PWKRVS +  R      PVRAAPD ISEKVEKSIKEA+E CS DPAS ECVAAWDEVEELSAAASHARD++K ++DPLENYCK+NPETDECRTYDN
Sbjct:    1 MATLSSLNLVTPRVVANVPDSTRVGPVKVPCLNQPWKRVSQLGSRRMQVFRPVRAAPDQISEKVEKSIKEAEEACSGDPASSECVAAWDEVEELSAAASHARDRQKANNDPLENYCKENPETDECRTYDN 130          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|823187883|ref|XP_012490329.1| (PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Gossypium raimondii] >gi|1029071352|ref|XP_016695925.1| PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Gossypium hirsutum] >gi|763774612|gb|KJB41735.1| hypothetical protein B456_007G122700 [Gossypium raimondii] >gi|1344094325|gb|PPD69803.1| hypothetical protein GOBAR_DD33313 [Gossypium barbadense])

HSP 1 Score: 186.808 bits (473), Expect = 6.150e-59
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRVSPMKLRVG---PVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSV+LV+ R +AN  D      VKV  L++PWKRVS  + R+    PVRAAPD ISEKVEKS+KEAQE CSDDPASGECVAAWDEVEELSAAASHARDKKKD+DPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVSLVSLRAVANVRDSKKGGPVKVATLSQPWKRVSQSQRRMQVMKPVRAAPDSISEKVEKSVKEAQEACSDDPASGECVAAWDEVEELSAAASHARDKKKDNDPLENYCKDNPETDECRTYDN 128          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1029065929|ref|XP_016693216.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Gossypium hirsutum])

HSP 1 Score: 185.652 bits (470), Expect = 1.765e-58
Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRV-SPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATL ++NLVTPR IA+ PD      +KVP LN+PWKR+ SP++ R   VRAAPD +SEKVE+SIKEAQE CSDDPASGECVAAWDEVEELSAAASHARD+ KD+DPLENYC+DNPETDEC+TYDN
Sbjct:    1 MATLFTLNLVTPRAIASLPDSTKGSPIKVPYLNQPWKRILSPLESRRMQVRAAPDRLSEKVEQSIKEAQEACSDDPASGECVAAWDEVEELSAAASHARDRLKDNDPLENYCQDNPETDECKTYDN 126          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1347718601|gb|PPS14958.1| (hypothetical protein GOBAR_AA05609 [Gossypium barbadense])

HSP 1 Score: 184.882 bits (468), Expect = 3.121e-58
Identity = 93/126 (73.81%), Postives = 108/126 (85.71%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRV-SPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATL ++NLVTPR +A+ PD      +KVP LN+PWKR+ SP++ R   VRAAPD +SEKVE+SIKEAQE CSDDPASGECVAAWDEVEELSAAASHARD+ KD+DPLENYC+DNPETDEC+TYDN
Sbjct:    1 MATLFTLNLVTPRAVASLPDSTKGSPIKVPYLNQPWKRILSPLESRRMQVRAAPDRLSEKVEQSIKEAQEACSDDPASGECVAAWDEVEELSAAASHARDRLKDNDPLENYCQDNPETDECKTYDN 126          
BLAST of Gh_A12G142100.1 vs. NCBI nr
Match: gi|1050557757|ref|XP_017628443.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic [Gossypium arboreum])

HSP 1 Score: 184.882 bits (468), Expect = 4.061e-58
Identity = 93/126 (73.81%), Postives = 108/126 (85.71%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRV-SPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATL ++NLVTPR IA+ PD      ++VP LN+PWKR+ SP++ R   VRAAPD +SEKVE+SIKEAQE CSDDPASGECVAAWDEVEELSAAASHARD+ KD+DPLENYC+DNPETDEC+TYDN
Sbjct:    1 MATLFTLNLVTPRAIASLPDSTKGSPIRVPYLNQPWKRILSPLESRRMQVRAAPDRLSEKVEQSIKEAQEACSDDPASGECVAAWDEVEELSAAASHARDRLKDNDPLENYCQDNPETDECKTYDN 126          
BLAST of Gh_A12G142100.1 vs. Araport11
Match: gnl|BL_ORD_ID|29510 (AT3G62410.1 | CP12 domain-containing protein 2 | Chr3:23091006-23091401 FORWARD LENGTH=131 | 201606)

HSP 1 Score: 140.969 bits (354), Expect = 4.099e-44
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    1 MATLSS-VNLVTPRIIANGPDVPT-VKVPC-LNRPWK---RVSPMKLRVGPVRAAPDG-ISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDD--DPLENYCKDNPETDECRTYDN 122
            MAT+++ +N+ T R+     + P  +  P  LN  W    R +   +++ P++AAP+G IS+ VEKSIKEAQE C+ DP SGECVAAWDEVEELSAAASHARDKKK D  DPLE YCKDNPET+ECRTYDN
Sbjct:    1 MATIATGLNIATQRVFVTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN 131          
BLAST of Gh_A12G142100.1 vs. Araport11
Match: gnl|BL_ORD_ID|20102 (AT2G47400.1 | CP12 domain-containing protein 1 | Chr2:19446889-19447263 FORWARD LENGTH=124 | 201606)

HSP 1 Score: 133.65 bits (335), Expect = 2.130e-41
Identity = 71/97 (73.20%), Postives = 78/97 (80.41%), Query Frame = 0
Query:   29 LNRPWKRVSPMKLRVGPVRAAPDG-ISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK--DDDPLENYCKDNPETDECRTYDN 122
            LN PWK  S  ++ V  V+A  +G ISEKVEKSI+EA+E C+DDP SGECVAAWDEVEELSAAASHARDKKK    DPLE YC DNPETDECRTYDN
Sbjct:   30 LNYPWKFGSMKRMVV--VKATSEGEISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124          
BLAST of Gh_A12G142100.1 vs. Araport11
Match: gnl|BL_ORD_ID|11767 (AT1G76560.1 | CP12 domain-containing protein 3 | Chr1:28728285-28728689 FORWARD LENGTH=134 | 201606)

HSP 1 Score: 78.5666 bits (192), Expect = 1.578e-19
Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0
Query:   51 DGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK--DDDPLENYCKDNPETDECRTYDN 122
            + +SE +E+ +KEA E+C  +  S EC  AWDEVEE+S A +  R K K  + DPLE++C++NPETDECR Y++
Sbjct:   61 EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED 134          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A1U8MRL5_GOSHI (calvin cycle protein CP12-1, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107940561 PE=4 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.284e-83
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A2P5YIY7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05057 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.144e-82
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVS MKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSAMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A2P5RVQ3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12144 PE=4 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.149e-82
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPR IANGPDVPT+KVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRTIANGPDVPTLKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A0D2T0A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G139400 PE=4 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.149e-82
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPR IANGPDVPT+KVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVNLVTPRTIANGPDVPTLKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A1U8NCV0_GOSHI (calvin cycle protein CP12-1, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107945995 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 6.216e-82
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSVNLVTPR IANGPDVPT+KVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVA WDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN
Sbjct:   40 MATLSSVNLVTPRTIANGPDVPTLKVPCLNRPWKRVSPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAVWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 161          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A1R3KHF0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01531 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 8.925e-60
Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPD---VPTVKVPCLNRPWKRVSPMKLR----VGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK-DDDPLENYCKDNPETDECRTYDN 122
            MATLSS+NLVTPR++AN PD   V  VKVPCLN+PWKRVS +  R      PVRAAPD ISEKVEKSIKEA+E CS DPAS ECVAAWDEVEELSAAASHARD++K ++DPLENYCK+NPETDECRTYDN
Sbjct:    1 MATLSSLNLVTPRVVANVPDSTRVGPVKVPCLNQPWKRVSQLGSRRMQVFRPVRAAPDQISEKVEKSIKEAEEACSGDPASSECVAAWDEVEELSAAASHARDRQKANNDPLENYCKENPETDECRTYDN 130          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A2P5Q5H8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD33313 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.166e-59
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRVSPMKLRVG---PVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSV+LV+ R +AN  D      VKV  L++PWKRVS  + R+    PVRAAPD ISEKVEKS+KEAQE CSDDPASGECVAAWDEVEELSAAASHARDKKKD+DPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVSLVSLRAVANVRDSKKGGPVKVATLSQPWKRVSQSQRRMQVMKPVRAAPDSISEKVEKSVKEAQEACSDDPASGECVAAWDEVEELSAAASHARDKKKDNDPLENYCKDNPETDECRTYDN 128          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A0D2TDJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G122700 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.166e-59
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRVSPMKLRVG---PVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSV+LV+ R +AN  D      VKV  L++PWKRVS  + R+    PVRAAPD ISEKVEKS+KEAQE CSDDPASGECVAAWDEVEELSAAASHARDKKKD+DPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVSLVSLRAVANVRDSKKGGPVKVATLSQPWKRVSQSQRRMQVMKPVRAAPDSISEKVEKSVKEAQEACSDDPASGECVAAWDEVEELSAAASHARDKKKDNDPLENYCKDNPETDECRTYDN 128          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A1U8K098_GOSHI (calvin cycle protein CP12-2, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107912321 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.166e-59
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRVSPMKLRVG---PVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATLSSV+LV+ R +AN  D      VKV  L++PWKRVS  + R+    PVRAAPD ISEKVEKS+KEAQE CSDDPASGECVAAWDEVEELSAAASHARDKKKD+DPLENYCKDNPETDECRTYDN
Sbjct:    1 MATLSSVSLVSLRAVANVRDSKKGGPVKVATLSQPWKRVSQSQRRMQVMKPVRAAPDSISEKVEKSVKEAQEACSDDPASGECVAAWDEVEELSAAASHARDKKKDNDPLENYCKDNPETDECRTYDN 128          
BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Match: A0A1U8JSF9_GOSHI (calvin cycle protein CP12-1, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107909995 PE=4 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.482e-58
Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 0
Query:    1 MATLSSVNLVTPRIIANGPDVPT---VKVPCLNRPWKRV-SPMKLRVGPVRAAPDGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDECRTYDN 122
            MATL ++NLVTPR IA+ PD      +KVP LN+PWKR+ SP++ R   VRAAPD +SEKVE+SIKEAQE CSDDPASGECVAAWDEVEELSAAASHARD+ KD+DPLENYC+DNPETDEC+TYDN
Sbjct:    1 MATLFTLNLVTPRAIASLPDSTKGSPIKVPYLNQPWKRILSPLESRRMQVRAAPDRLSEKVEQSIKEAQEACSDDPASGECVAAWDEVEELSAAASHARDRLKDNDPLENYCQDNPETDECKTYDN 126          
BLAST of Gh_A12G142100.1 vs. ExPASy Swiss-Prot
Match: CP122_ARATH (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.946e-43
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    1 MATLSS-VNLVTPRIIANGPDVPT-VKVPC-LNRPWK---RVSPMKLRVGPVRAAPDG-ISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDD--DPLENYCKDNPETDECRTYDN 122
            MAT+++ +N+ T R+     + P  +  P  LN  W    R +   +++ P++AAP+G IS+ VEKSIKEAQE C+ DP SGECVAAWDEVEELSAAASHARDKKK D  DPLE YCKDNPET+ECRTYDN
Sbjct:    1 MATIATGLNIATQRVFVTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN 131          
BLAST of Gh_A12G142100.1 vs. ExPASy Swiss-Prot
Match: CP121_ARATH (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.051e-40
Identity = 71/97 (73.20%), Postives = 78/97 (80.41%), Query Frame = 0
Query:   29 LNRPWKRVSPMKLRVGPVRAAPDG-ISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK--DDDPLENYCKDNPETDECRTYDN 122
            LN PWK  S  ++ V  V+A  +G ISEKVEKSI+EA+E C+DDP SGECVAAWDEVEELSAAASHARDKKK    DPLE YC DNPETDECRTYDN
Sbjct:   30 LNYPWKFGSMKRMVV--VKATSEGEISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124          
BLAST of Gh_A12G142100.1 vs. ExPASy Swiss-Prot
Match: CP123_ARATH (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.519e-18
Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0
Query:   51 DGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKK--DDDPLENYCKDNPETDECRTYDN 122
            + +SE +E+ +KEA E+C  +  S EC  AWDEVEE+S A +  R K K  + DPLE++C++NPETDECR Y++
Sbjct:   61 EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED 134          
BLAST of Gh_A12G142100.1 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.403e-17
Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   53 ISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDD----DPLENYCKDNPETDECRTYDN 122
            +++KV+ ++KEA++ C+    S +C  AWD VEELSAA SH +D  K D    DPLE +CKD P+ DECR Y++
Sbjct:   35 LNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 107          
The following BLAST results are available for this feature:
BLAST of Gh_A12G142100.1 vs. NCBI nr
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1028972095|ref|XP_016729496.1|2.719e-83100.00PREDICTED: calvin cycle protein CP12-1, chloroplas... [more]
gi|1347719233|gb|PPS15531.1|2.553e-8299.18hypothetical protein GOBAR_AA05057 [Gossypium barb... [more]
gi|823209510|ref|XP_012437971.1|3.748e-8298.36PREDICTED: calvin cycle protein CP12-1, chloroplas... [more]
gi|1029114447|ref|XP_016735669.1|7.400e-8297.54PREDICTED: calvin cycle protein CP12-1, chloroplas... [more]
gi|1269894005|ref|XP_022757890.1|8.728e-6073.64calvin cycle protein CP12-1, chloroplastic-like [D... [more]
gi|1137248651|gb|OMP06522.1|1.063e-5976.15hypothetical protein CCACVL1_01531 [Corchorus caps... [more]
gi|823187883|ref|XP_012490329.1|6.150e-5976.56PREDICTED: calvin cycle protein CP12-2, chloroplas... [more]
gi|1029065929|ref|XP_016693216.1|1.765e-5874.60PREDICTED: calvin cycle protein CP12-1, chloroplas... [more]
gi|1347718601|gb|PPS14958.1|3.121e-5873.81hypothetical protein GOBAR_AA05609 [Gossypium barb... [more]
gi|1050557757|ref|XP_017628443.1|4.061e-5873.81PREDICTED: calvin cycle protein CP12-1, chloroplas... [more]
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BLAST of Gh_A12G142100.1 vs. Araport11
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|295104.099e-4459.54AT3G62410.1 | CP12 domain-containing protein 2 | C... [more]
gnl|BL_ORD_ID|201022.130e-4173.20AT2G47400.1 | CP12 domain-containing protein 1 | C... [more]
gnl|BL_ORD_ID|117671.578e-1950.00AT1G76560.1 | CP12 domain-containing protein 3 | C... [more]
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BLAST of Gh_A12G142100.1 vs. ExPASy TrEMBL
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A1U8MRL5_GOSHI2.284e-83100.00calvin cycle protein CP12-1, chloroplastic-like OS... [more]
A0A2P5YIY7_GOSBA2.144e-8299.18Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5RVQ3_GOSBA3.149e-8298.36Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2T0A5_GOSRA3.149e-8298.36Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8NCV0_GOSHI6.216e-8297.54calvin cycle protein CP12-1, chloroplastic-like OS... [more]
A0A1R3KHF0_COCAP8.925e-6076.15Uncharacterized protein OS=Corchorus capsularis OX... [more]
A0A2P5Q5H8_GOSBA5.166e-5976.56Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2TDJ0_GOSRA5.166e-5976.56Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8K098_GOSHI5.166e-5976.56calvin cycle protein CP12-2, chloroplastic-like OS... [more]
A0A1U8JSF9_GOSHI1.482e-5874.60calvin cycle protein CP12-1, chloroplastic-like OS... [more]
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BLAST of Gh_A12G142100.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-09-18 (BLASTP of TM1-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
CP122_ARATH3.946e-4359.54Calvin cycle protein CP12-2, chloroplastic OS=Arab... [more]
CP121_ARATH2.051e-4073.20Calvin cycle protein CP12-1, chloroplastic OS=Arab... [more]
CP123_ARATH1.519e-1850.00Calvin cycle protein CP12-3, chloroplastic OS=Arab... [more]
CP12_CHLRE9.403e-1748.65Calvin cycle protein CP12, chloroplastic OS=Chlamy... [more]
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InterPro
Analysis Name: InterProScan Analysis for TM1-CRI v1.0.a1 Gossypium hirsutum proteins
Date Performed: 2019-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003823Domain of unknown function CP12PFAMPF02672CP12coord: 53..121
e-value: 4.6E-29
score: 101.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..122
NoneNo IPR availablePANTHERPTHR33921:SF15CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTICcoord: 1..122
IPR039314Calvin cycle protein CP12-likePANTHERPTHR33921FAMILY NOT NAMEDcoord: 1..122

Sequences
The following sequences are available for this feature:

protein sequence of Gh_A12G142100.1_CRI-TM1_v1

>Gh_A12G142100.1_CRI-TM1_v1 ID=Gh_A12G142100.1_CRI-TM1_v1; Name=Gh_A12G142100.1_CRI-TM1_v1; organism=Gossypium hirsutum; type=polypeptide; length=123bp
MATLSSVNLVTPRIIANGPDVPTVKVPCLNRPWKRVSPMKLRVGPVRAAP
DGISEKVEKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKD
DDPLENYCKDNPETDECRTYDN.
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mRNA from alignment at A12:81421540..81422218+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gh_A12G142100.1_CRI-TM1_v1 ID=Gh_A12G142100.1_CRI-TM1_v1; Name=Gh_A12G142100.1; organism=Gossypium hirsutum; type=mRNA; length=679bp; location=Sequence derived from: A12:81421540..81422218+ (Gossypium hirsutum
AAAATGATAAGAAATTTGTGTTCATCAACCATTAGAAAAACCCTTATATT TTTCATCCCCGGTCTTAGCATAACCATTACATCATTTCCACTCATAATAT CCAAACACAGTAACATTACCAATGGCAACCCTGTCTAGCGTGAACCTCGT AACCCCAAGAATCATAGCCAATGGACCAGACGTCCCAACCGTCAAGGTCC CATGCCTTAACCGGCCTTGGAAAAGGGTATCCCCAATGAAGCTGCGTGTC GGGCCTGTTAGAGCTGCACCGGATGGAATATCGGAGAAGGTGGAGAAAAG CATAAAAGAGGCACAAGAGATGTGTTCGGATGATCCGGCGAGTGGCGAGT GTGTGGCGGCTTGGGACGAAGTGGAAGAGCTGAGTGCGGCGGCTAGCCAC GCTAGGGACAAGAAGAAAGACGATGATCCTTTGGAGAATTACTGTAAAGA CAACCCGGAGACGGATGAGTGTCGTACTTATGATAATTGAAAATGTTTGT TTTTTCTAGTTTCTTAGATTATAGTTGGATGTTAATCTGAAATATATTTT ATTGTTGGTTTATATAGTTTGTTATAATGATGTAATCCTAAAATTATACA CTCCTAGAAAAGAAAATGATATCAATTAATTTGGTAATTTGAAGTTTCTT TTTATGAATTATTAAGTAATGGGTTTTCT
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Coding sequence (CDS) from alignment at A12:81421540..81422218+

>Gh_A12G142100.1_CRI-TM1_v1 ID=Gh_A12G142100.1_CRI-TM1_v1; Name=Gh_A12G142100.1; organism=Gossypium hirsutum; type=CDS; length=369bp; location=Sequence derived from: A12:81421540..81422218+ (Gossypium hirsutum
ATGGCAACCCTGTCTAGCGTGAACCTCGTAACCCCAAGAATCATAGCCAA
TGGACCAGACGTCCCAACCGTCAAGGTCCCATGCCTTAACCGGCCTTGGA
AAAGGGTATCCCCAATGAAGCTGCGTGTCGGGCCTGTTAGAGCTGCACCG
GATGGAATATCGGAGAAGGTGGAGAAAAGCATAAAAGAGGCACAAGAGAT
GTGTTCGGATGATCCGGCGAGTGGCGAGTGTGTGGCGGCTTGGGACGAAG
TGGAAGAGCTGAGTGCGGCGGCTAGCCACGCTAGGGACAAGAAGAAAGAC
GATGATCCTTTGGAGAATTACTGTAAAGACAACCCGGAGACGGATGAGTG
TCGTACTTATGATAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003823DUF_CP12
IPR039314CP12-like