GB_A07G1718, GB_A07G1718_ZJU-AD2_v1.1.a1 (mRNA) Gossypium barbadense
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1050649353|ref|XP_017648080.1| (PREDICTED: uncharacterized protein LOC108488307 [Gossypium arboreum]) HSP 1 Score: 303.138 bits (775), Expect = 8.321e-102 Identity = 148/198 (74.75%), Postives = 168/198 (84.85%), Query Frame = 0 Query: 9 IEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTDGQSERVIQILEDMLRN 206 IEYH GKA VADALSRR M F RLSLFDD SLLA+LQ+ESG+T++F LN+ GVLCFRG+ CV N+ DLRQSILRE H+S YAMHPGGNK+Y++L ELYWWLGLKRE VKI LW W+RVTMDFV+GLPLTP +KD VWVIVDRLTKS HFI V+T+YSLQKL KLYI +IVR+HGTDGQSE V+QILEDMLRN Sbjct: 2 IEYHLGKAKEVADALSRRTM------FARLSLFDDRSLLAELQIESGSTSDFVLNNDGVLCFRGQFCVPNDSDLRQSILRETHSSPYAMHPGGNKIYRELNELYWWLGLKRESVKIPLWNWKRVTMDFVSGLPLTPIKKDYVWVIVDRLTKSVHFILVQTDYSLQKLIKLYISKIVRMHGTDGQSEMVVQILEDMLRN 193
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|32396098|gb|AAP43916.1| (integrase, partial [Gossypium herbaceum]) HSP 1 Score: 285.419 bits (729), Expect = 3.249e-93 Identity = 145/239 (60.67%), Postives = 166/239 (69.46%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQV-------------------------ESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG 188 LLKD+DC+IEYHPGKANVVADALSRR ++DLRAMF RLSL+DDGSLLA+LQV + G T+ FGLN GVLCFRGRICV + DLRQ+IL+EAH AMHPGGNK+Y DL+ELYWW LKRE+ VKI LWKWERVTMDF +GLPLTP++KDSVWVIVDRLTKS HFI VRT++SLQ+LAKLY+ EIVRLHG Sbjct: 74 LLKDYDCSIEYHPGKANVVADALSRRTVSDLRAMFARLSLYDDGSLLAELQVRPTWVDQIKEKQLEDESLVTRFQQVKEGKTSEFGLNGDGVLCFRGRICVPKDSDLRQTILKEAHGGLCAMHPGGNKLYHDLRELYWWPRLKREVTEFVGKCLTCQQVKAEHQLPSGLLQPVKIPLWKWERVTMDFASGLPLTPSKKDSVWVIVDRLTKSAHFIPVRTDFSLQQLAKLYVAEIVRLHG 312
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|823218590|ref|XP_012441975.1| (PREDICTED: uncharacterized protein LOC105766987 [Gossypium raimondii]) HSP 1 Score: 282.722 bits (722), Expect = 1.702e-86 Identity = 137/183 (74.86%), Postives = 153/183 (83.61%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL----VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLY 179 LLKD+DC+IEYHPGK N+VADALS R ++DLRAMF L F DGSLLA+LQVE G T NFGLNS GVLCFRGR+CV + +LRQSILREA++S YAMH GGNKMY DL E YWW GLKRE+ VKI LWKWERVTMDFV+GLPLTPT+KD VWVIVDRLTK HFI VRT+YSLQKLAKL+ Sbjct: 296 LLKDYDCSIEYHPGKVNMVADALSPRVVSDLRAMFACLIFFYDGSLLAELQVEHGETLNFGLNSEGVLCFRGRVCVSRDNNLRQSILREAYSSPYAMHLGGNKMYCDLHEFYWWPGLKREVTDFPVKIPLWKWERVTMDFVSGLPLTPTKKDLVWVIVDRLTKFAHFIPVRTDYSLQKLAKLW 478
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1050648751|ref|XP_017647736.1| (PREDICTED: uncharacterized protein LOC108487911 [Gossypium arboreum]) HSP 1 Score: 266.159 bits (679), Expect = 1.139e-85 Identity = 131/177 (74.01%), Postives = 149/177 (84.18%), Query Frame = 0 Query: 28 MTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTDGQSERVIQILEDML 204 MTDLRAMFTRLSLFD+GSLLA+LQVESG T +FGLNS GV CFRGRICV + +LRQSILRE HNS YAMH GGNKMYQDL+E YWW GLKREL ERVT++FV+GLPLT T+ DSVWVIVD+LTKS HFI +R +Y+LQKLAKLY+ +IVRLHG DGQ +RVIQILED+L Sbjct: 1 MTDLRAMFTRLSLFDNGSLLAELQVESGNTVDFGLNSEGVFCFRGRICVQKDTELRQSILREVHNSPYAMHLGGNKMYQDLRESYWWPGLKREL--------ERVTIEFVSGLPLTATKNDSVWVIVDQLTKSAHFIPIRIDYTLQKLAKLYVSKIVRLHGIDGQLDRVIQILEDIL 169
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1050649355|ref|XP_017648081.1| (PREDICTED: uncharacterized protein LOC108488308 [Gossypium arboreum]) HSP 1 Score: 253.062 bits (645), Expect = 7.674e-83 Identity = 128/181 (70.72%), Postives = 145/181 (80.11%), Query Frame = 0 Query: 9 IEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGT 189 IEYH GKA VADALSRR M F RLSLFDD SLLA+LQ+ESG+T++F LN+ GVLCFRG+ CV N+ DLRQSILRE H+S YAMHPGGNK+Y++L ELYWWLGLKRE VKI LW W+RVTMDFV G PLT VWVIVDRLTKS HFI V+T+YSLQKL KLYI +IVR+HG Sbjct: 2 IEYHLGKAKEVADALSRRTM------FARLSLFDDRSLLAELQIESGSTSDFVLNNDGVLCFRGQFCVPNDSDLRQSILRETHSSPYAMHPGGNKIYRELNELYWWLGLKRESVKIPLWNWKRVTMDFVRGWPLT-----HVWVIVDRLTKSVHFILVQTDYSLQKLIKLYISKIVRMHGV 171
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1050567107|ref|XP_017604133.1| (PREDICTED: uncharacterized protein LOC108450877 [Gossypium arboreum]) HSP 1 Score: 248.44 bits (633), Expect = 1.649e-80 Identity = 128/205 (62.44%), Postives = 146/205 (71.22%), Query Frame = 0 Query: 9 IEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQV-------------------------ESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG 188 IEYHPGK NVV DALSRR MTD+R MF LSL++DGSLLA+LQV ESG T +FGLNS GVLCFRG+ICV + +LRQSILREA+ S YAMHPG NKMY+DL+ELYWW VKI LWKWE++T DFV+ LPLTP +KDSVWVIVD LTKS HFI V +YSLQKLAKLY+ VRL+G Sbjct: 2 IEYHPGKVNVVVDALSRRVMTDMRVMFACLSLYEDGSLLAELQVKPTWIEQIKGKSIEDESLGLCFRQVESGNTVDFGLNSEGVLCFRGKICVSKDTELRQSILREAYISFYAMHPGRNKMYRDLRELYWW------TVKIPLWKWEKMTTDFVSVLPLTPIKKDSVWVIVDWLTKSAHFIPVHIDYSLQKLAKLYVSGTVRLNG 200
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|823218564|ref|XP_012441962.1| (PREDICTED: uncharacterized protein LOC105766968 [Gossypium raimondii]) HSP 1 Score: 268.47 bits (685), Expect = 1.748e-80 Identity = 140/217 (64.52%), Postives = 159/217 (73.27%), Query Frame = 0 Query: 16 ANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTDGQSERVIQILEDMLRN 206 NVVAD LSRRA+TDLRAMF LSLFDDGSLLA+LQVESG T +FGLNS GVLCFRGRI V N+ +LRQSILREA++S AMH G NKMY+D ELYWW GLKRE+ VKI+LWKWERV+MDFVNGLPL T+ DSVWVIVDRLTKS HFI + ++YS+QKLAKL + TDGQS+RVIQILEDMLR+ Sbjct: 720 VNVVADTLSRRAVTDLRAMFAHLSLFDDGSLLAELQVESGHTDDFGLNSEGVLCFRGRISVSNDTELRQSILREAYSSPCAMHLGKNKMYRDFYELYWWPGLKREVIDFVGKCLTCQQVKAEHQLPSGLLQPVKIALWKWERVSMDFVNGLPLIFTKNDSVWVIVDRLTKSSHFILIHSDYSVQKLAKLLNFSTMFHPQTDGQSQRVIQILEDMLRS 936
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|823231889|ref|XP_012448637.1| (PREDICTED: uncharacterized protein LOC105771790 [Gossypium raimondii]) HSP 1 Score: 251.521 bits (641), Expect = 1.521e-77 Identity = 133/206 (64.56%), Postives = 144/206 (69.90%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTDGQSERVIQILEDMLRN 206 LLKD+DCTIEYHPGKANVVADALSRRAMTDLRAMF RL LFDDGSLLA+LQVESG T + LNS G L FR RIC VKI LWKWERVT+DFV+GLPLTPT+KD VWVIVDRLTKS HFI VRT+YSLQKL+KLY+ EIVRLHGTDG+ ERVIQILEDMLR+ Sbjct: 252 LLKDYDCTIEYHPGKANVVADALSRRAMTDLRAMFARLILFDDGSLLAELQVESGNTEDLRLNSEGELYFRERICP---------------------------------------------VKIPLWKWERVTIDFVSGLPLTPTKKDLVWVIVDRLTKSVHFIPVRTDYSLQKLSKLYVSEIVRLHGTDGRPERVIQILEDMLRS 412
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1028980179|ref|XP_016733510.1| (PREDICTED: uncharacterized protein LOC107944194, partial [Gossypium hirsutum]) HSP 1 Score: 259.996 bits (663), Expect = 1.872e-76 Identity = 140/294 (47.62%), Postives = 177/294 (60.20%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVES-------------------------GATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVK--------------------------ISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG--------------------------------------TDGQSERVIQILEDMLR 205 LLKD+DC I+YHPGKANVVADALSR+A +LRAMF RLS+ DDGSLLA+L+V+ GA NF ++ L FR RICV + ++++ ILREAHNS +A+HPGG KMY+DL+ELYWW G+K+++V+ I WKW+R+TMDFV GLPL+ ++K+++WVIVDRLTKS HFI+VRT++SLQKLA++YI EIVRLHG TDGQSERVIQILEDMLR Sbjct: 1006 LLKDYDCVIDYHPGKANVVADALSRKAAIELRAMFARLSIKDDGSLLAELRVKPVMFDQIRAAQLKDEKLMRKREMVQYGAVENFSIDEHDCLRFRNRICVPSTSEIKELILREAHNSIFALHPGGTKMYRDLRELYWWPGIKKDIVEYVSKCLTCQRVKAEHQVPTGLLQPITIPEWKWDRITMDFVTGLPLSVSKKNAIWVIVDRLTKSAHFIAVRTDWSLQKLAEVYIREIVRLHGIPVSIISDRDPRFTSRFWKQLHESLGTRLSFSTAFHPQTDGQSERVIQILEDMLR 1299 HSP 2 Score: 163.31 bits (412), Expect = 9.226e-43 Identity = 87/191 (45.55%), Postives = 111/191 (58.12%), Query Frame = 0 Query: 3 KDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVES-------------------------GATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVK--------------------------ISLWKWERVTMDFVNGLPL 142 KDF YHPGKANVVADALSR+A +LRAMF RLS+ DDGSLLA+L+V+ GA NF ++ L FR RICV + ++++ ILREAHNS +A+HPGG KMY+DL+ELYWW G+K+++V+ I WKW+R+TMDFV GLPL Sbjct: 1831 KDF-IVYNYHPGKANVVADALSRKAAIELRAMFVRLSIKDDGSLLAELRVKPVMFDQIRAAQLKDEKLMRKREMVQYGAVENFSIDEHDCLRFRNRICVPSTSEIKELILREAHNSIFALHPGGTKMYRDLRELYWWPGIKKDIVEYVSKCLTCQRVKAEHQVPTGLLQPITIPEWKWDRITMDFVTGLPL 2020
BLAST of GB_A07G1718 vs. NCBI nr
Match: gi|1050642762|ref|XP_017644636.1| (PREDICTED: uncharacterized protein LOC108485330 [Gossypium arboreum]) HSP 1 Score: 233.417 bits (594), Expect = 7.070e-74 Identity = 114/156 (73.08%), Postives = 128/156 (82.05%), Query Frame = 0 Query: 51 QVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTDGQSERVIQILEDMLRN 206 QVE G T +F +NS GVL F G ICV N+ LR ILREAH+S Y MH GGNKMY+DL+EL WW GLKRE VKI +W WERVT+DFV+GLPLTPT+KD VWV+VDRLTK+ +FI VRT +SLQKLAKLYI EIVRLHGTDGQ ERVIQILEDMLR Sbjct: 12 QVEDGVTTDFEINSKGVLYFPGWICVPNDEGLRLLILREAHSSPYVMHLGGNKMYRDLRELSWWPGLKRESVKIPMWTWERVTIDFVSGLPLTPTKKDPVWVVVDRLTKAAYFILVRTCFSLQKLAKLYISEIVRLHGTDGQLERVIQILEDMLRG 167
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: Q7XYU4_GOSHE (Integrase (Fragment) OS=Gossypium herbaceum OX=34274 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.729e-93 Identity = 145/239 (60.67%), Postives = 166/239 (69.46%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQV-------------------------ESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG 188 LLKD+DC+IEYHPGKANVVADALSRR ++DLRAMF RLSL+DDGSLLA+LQV + G T+ FGLN GVLCFRGRICV + DLRQ+IL+EAH AMHPGGNK+Y DL+ELYWW LKRE+ VKI LWKWERVTMDF +GLPLTP++KDSVWVIVDRLTKS HFI VRT++SLQ+LAKLY+ EIVRLHG Sbjct: 74 LLKDYDCSIEYHPGKANVVADALSRRTVSDLRAMFARLSLYDDGSLLAELQVRPTWVDQIKEKQLEDESLVTRFQQVKEGKTSEFGLNGDGVLCFRGRICVPKDSDLRQTILKEAHGGLCAMHPGGNKLYHDLRELYWWPRLKREVTEFVGKCLTCQQVKAEHQLPSGLLQPVKIPLWKWERVTMDFASGLPLTPSKKDSVWVIVDRLTKSAHFIPVRTDFSLQQLAKLYVAEIVRLHG 312
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A1U8N3B2_GOSHI (uncharacterized protein LOC107944194 OS=Gossypium hirsutum OX=3635 GN=LOC107944194 PE=4 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.573e-76 Identity = 140/294 (47.62%), Postives = 177/294 (60.20%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVES-------------------------GATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVK--------------------------ISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG--------------------------------------TDGQSERVIQILEDMLR 205 LLKD+DC I+YHPGKANVVADALSR+A +LRAMF RLS+ DDGSLLA+L+V+ GA NF ++ L FR RICV + ++++ ILREAHNS +A+HPGG KMY+DL+ELYWW G+K+++V+ I WKW+R+TMDFV GLPL+ ++K+++WVIVDRLTKS HFI+VRT++SLQKLA++YI EIVRLHG TDGQSERVIQILEDMLR Sbjct: 1006 LLKDYDCVIDYHPGKANVVADALSRKAAIELRAMFARLSIKDDGSLLAELRVKPVMFDQIRAAQLKDEKLMRKREMVQYGAVENFSIDEHDCLRFRNRICVPSTSEIKELILREAHNSIFALHPGGTKMYRDLRELYWWPGIKKDIVEYVSKCLTCQRVKAEHQVPTGLLQPITIPEWKWDRITMDFVTGLPLSVSKKNAIWVIVDRLTKSAHFIAVRTDWSLQKLAEVYIREIVRLHGIPVSIISDRDPRFTSRFWKQLHESLGTRLSFSTAFHPQTDGQSERVIQILEDMLR 1299 HSP 2 Score: 163.31 bits (412), Expect = 7.750e-43 Identity = 87/191 (45.55%), Postives = 111/191 (58.12%), Query Frame = 0 Query: 3 KDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVES-------------------------GATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVK--------------------------ISLWKWERVTMDFVNGLPL 142 KDF YHPGKANVVADALSR+A +LRAMF RLS+ DDGSLLA+L+V+ GA NF ++ L FR RICV + ++++ ILREAHNS +A+HPGG KMY+DL+ELYWW G+K+++V+ I WKW+R+TMDFV GLPL Sbjct: 1831 KDF-IVYNYHPGKANVVADALSRKAAIELRAMFVRLSIKDDGSLLAELRVKPVMFDQIRAAQLKDEKLMRKREMVQYGAVENFSIDEHDCLRFRNRICVPSTSEIKELILREAHNSIFALHPGGTKMYRDLRELYWWPGIKKDIVEYVSKCLTCQRVKAEHQVPTGLLQPITIPEWKWDRITMDFVTGLPL 2020
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A1U8PXY0_GOSHI (uncharacterized protein LOC107963051 OS=Gossypium hirsutum OX=3635 GN=LOC107963051 PE=4 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.112e-70 Identity = 123/214 (57.48%), Postives = 148/214 (69.16%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQV-------------------------ESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGT 189 LLKD+DC IEYH GK NVVADALS R +DLRAM + LS D+GSLLA+LQV E+G T++FG+NS GVLCF GR+C+ + DLRQSIL+EAH+S YAMHPGGNKMYQ+L++LYWW GLKREL M+FV G L +K+S+WVIVDRLTKS HF+ V T+YSLQKLA+LY+ EIVRLHG Sbjct: 148 LLKDYDCMIEYHLGKVNVVADALSHRVKSDLRAMLSHLSWLDNGSLLAELQVKPIWIEQIKSKQLMDETLGARLRQVENGKTSDFGINSEGVLCFCGRMCIPKDNDLRQSILQEAHSSLYAMHPGGNKMYQNLRKLYWWPGLKREL------------MEFV-GKCLVCQKKESIWVIVDRLTKSTHFVPVLTDYSLQKLARLYVAEIVRLHGV 348
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A1U8PFP3_GOSHI (uncharacterized protein LOC107894645 OS=Gossypium hirsutum OX=3635 GN=LOC107958624 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.445e-69 Identity = 115/170 (67.65%), Postives = 130/170 (76.47%), Query Frame = 0 Query: 18 VVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELVKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLH 187 +VA+ALS RAMTDLRAMF RL L+DDGSLL + G VL FRGRI N+ DLR SILRE H+S YAMHP GNKMY+DL+ELYWW GLKRE VKI +WKWE VTMDF++GLPLTPT KD V VIVD+LTKS HFI VRT++ LQKLAKLYI EI+RLH Sbjct: 1 MVANALSSRAMTDLRAMFVRLCLYDDGSLLTEF--------------GTVLRFRGRIYAPNDEDLRLSILREVHSSPYAMHPSGNKMYKDLRELYWWPGLKRE-VKIPMWKWEGVTMDFISGLPLTPTMKDYVLVIVDQLTKSAHFIPVRTDFCLQKLAKLYISEIIRLH 155
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A1U8HTV1_GOSHI (uncharacterized protein LOC107887650 OS=Gossypium hirsutum OX=3635 GN=LOC107887650 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.852e-68 Identity = 115/193 (59.59%), Postives = 142/193 (73.58%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKRELV----KISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGT 189 LLKD+D TIEYH GK NVVA+ALSRR +DLRAM RLSL DD VESG T++FG+NS GVLCFR R+C+ + DLRQSIL +AH+ YAMHPGGNK + +L++LYWW GLKRE+V K +++ + F P+RKDS+WVIVD++TKS HFI VRT+YSLQKLA+LY+ EIVRLHG Sbjct: 89 LLKDYDYTIEYHLGKVNVVANALSRRVKSDLRAMLARLSLLDD--------VESGETSDFGINSKGVLCFRERMCIPKDDDLRQSILWKAHSGLYAMHPGGNKNW-NLRKLYWWPGLKREVVDFVGKCLVYQKVKAKHQF-------PSRKDSIWVIVDQITKSAHFIPVRTDYSLQKLARLYVAEIVRLHGV 265
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: Q7XYU3_GOSHI (Integrase (Fragment) OS=Gossypium hirsutum OX=3635 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.772e-64 Identity = 110/239 (46.03%), Postives = 144/239 (60.25%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKL-------------------------QVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG 188 LLKD++ I+YHPGKANVVADAL+R+ + LR M T+L + DDGS+LA+L Q E+ ++F + S G L F+ RICV N +L Q IL EAHN A+HPG KMY DL+++YWW G KR++ + + WKW+R+TMDF++GLPLTP +K+++W IVDRLTKS HFI V TNYSL KL +LYI +IVRLHG Sbjct: 80 LLKDYELVIDYHPGKANVVADALNRKLLFALRVMNTQLKISDDGSILAELRARPMFLQEISEAQKNDQNLLAKRKQCEADTRSDFRIGSNGCLMFKNRICVPKNDELIQKILHEAHNGCLAVHPGSTKMYNDLKKMYWWSGKKRDIFEFVSKCLVCQQVKAEHQVPSGLLQPIMVPEWKWDRITMDFISGLPLTPGKKNAIWAIVDRLTKSAHFILVHTNYSLNKLVELYIRKIVRLHG 318
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: Q7XYU2_GOSHI (Integrase (Fragment) OS=Gossypium hirsutum OX=3635 PE=4 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.017e-64 Identity = 109/239 (45.61%), Postives = 144/239 (60.25%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLAKL-------------------------QVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG 188 LLKD++ I+YHPGK NVV DALSRR + LR M T+L + DDGS+LA+L Q E+ ++F + S G L F+ +ICV N +L Q+IL EAHNS A+HPG KMY DL+++YWW G+KR++ + + WKW+R+TMDF++GLPLTP +K+++W IVDRLTKS HFI V T+YSL KL +LYI EI RLHG Sbjct: 75 LLKDYELVIDYHPGKTNVVVDALSRRLLFALRVMNTQLKISDDGSILAELRARSMFLQEISEAQKNDQDLLAKRKQCEADMGSDFRIGSDGCLMFKNQICVPKNDELIQNILHEAHNSCLAVHPGSTKMYNDLKKMYWWSGMKRDISEFVSKCLVCQQVKAEHQVPSGLLQPIMVPEWKWDRITMDFISGLPLTPGKKNAIWAIVDRLTKSAHFIPVCTDYSLNKLVELYIREIFRLHG 313
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A2N9J654_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59966 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.796e-63 Identity = 122/272 (44.85%), Postives = 156/272 (57.35%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFT--------------RLSLFDDGSLLA-------------------------KLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG--TDGQSERVIQILEDMLR 205 L+KD+D TI+YHPGKANVVADALSR++ +L AM T + L + G+ LA KL VES A + F ++ G L F R+CV N+ DL++ IL EAHN+ Y + PGG KMY+DL+ +WW +K E+ + I WKWE ++MDFV G P TP+ DS+WVIVDRLTKS HF++++ SL+KLAKLY+ EIVRLHG TDGQSER IQILEDMLR Sbjct: 518 LIKDYDLTIKYHPGKANVVADALSRKSTGNLAAMLTTQRRILEDLRKLRIEVRLHEPGAQLANLKVQPTLVERIKVAQAGDPHLQKRKLMVESSAPSEFCIHEDGSLRFGNRLCVPNDPDLKEEILSEAHNTGYTVPPGGTKMYRDLKGTFWWNNMKSEIAGYVARCLVCQQVKIEHQRPGGLLQPLPIPEWKWEHISMDFVTGFPRTPSGNDSIWVIVDRLTKSAHFLAIKVGLSLEKLAKLYVNEIVRLHGVPTDGQSERTIQILEDMLR 789
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A2N9EHF1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2020 PE=4 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 9.621e-63 Identity = 121/280 (43.21%), Postives = 153/280 (54.64%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLA-----------KLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHG--------------------------------------TDGQSERVIQILEDMLR 205 L+KD+D TI+YHPGKANVVADALSR++ +L AM T + G KL VESGA + F ++ G L F R+CV N+ DL++ IL EAHN+ Y +HPGG KMY+DL+ +WW +KRE+ + I WKWE ++MDFV G P TP DS+WVIVDRLTKS HF++++ SL++LAKLY+ EIVRLHG TDGQSER IQILEDMLR Sbjct: 651 LIKDYDLTIKYHPGKANVVADALSRKSTGNLAAMLTTQRQYTGGFEEVAQAGDPHLQKMKLMVESGAPSEFCIHEDGSLRFGNRLCVPNDPDLKEEILSEAHNTGYTVHPGGTKMYRDLKGTFWWNNMKREIAGYVARCLVCQQVKIEHQRPGGLLQPLPIPEWKWEHISMDFVTGFPRTPNGNDSIWVIVDRLTKSAHFLAIKIGLSLERLAKLYVNEIVRLHGVPVTIVSDRDRRFVSQFWKKLHMAMGTNLNFSTAFHPQTDGQSERTIQILEDMLR 930
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Match: A0A2N9I1S3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45861 PE=4 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.782e-61 Identity = 116/251 (46.22%), Postives = 149/251 (59.36%), Query Frame = 0 Query: 1 LLKDFDCTIEYHPGKANVVADALSRRAMTDLRAMFTRLSLFDDGSLLA-----------KLQVESGATANFGLNSGGVLCFRGRICVLNNVDLRQSILREAHNSHYAMHPGGNKMYQDLQELYWWLGLKREL--------------------------VKISLWKWERVTMDFVNGLPLTPTRKDSVWVIVDRLTKSDHFISVRTNYSLQKLAKLYILEIVRLHGTD---GQSER------VIQILEDMLR 205 L+KD+D TI+YHPGKANVVADALSR++ +L AM T + G KL VESGA + F ++ G L F R+CV N+ DL++ IL EAHN+ Y +HPGG KMY+DL+ +WW +KRE+ + I WKWE ++MDFV G P TP DS+WVIVDRLTKS HF++++ SL++LAKLY+ EIVRLHG S+R IQILEDMLR Sbjct: 796 LIKDYDLTIKYHPGKANVVADALSRKSTGNLAAMLTTQRQYTGGFEEVAQAGDPHLQKMKLMVESGAPSEFCIHEDGSLRFGNRLCVPNDPDLKEEILSEAHNTGYTVHPGGTKMYRDLKGTFWWNNMKREIAGYVARCLVCQQVKIEHQRPGGLLQPLPIPEWKWEHISMDFVTGFPRTPNGNDSIWVIVDRLTKSAHFLAIKIGLSLERLAKLYVNEIVRLHGVPHSLSSSDRWASLKGTIQILEDMLR 1046 The following BLAST results are available for this feature:
BLAST of GB_A07G1718 vs. NCBI nr
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs NCBI nr) Total hits: 10
BLAST of GB_A07G1718 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs UniProt Swissprot) Total hits: 0
BLAST of GB_A07G1718 vs. TAIR10
Analysis Date: 2019-03-29 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs arabidopsis TAIR10) Total hits: 0
BLAST of GB_A07G1718 vs. ExPASy TrEMBL
Analysis Date: 2019-03-30 (BLASTP of ZJU v1.1 Gossypium barbadense proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZJU v1.1 Gossypium barbadense proteins
Date Performed: 2019-03-29
Sequences
The
following sequences are available for this feature:
mRNA sequence >GB_A07G1718_ZJU-AD2_v1.1.a1 ID=GB_A07G1718_ZJU-AD2_v1.1.a1; Name=GB_A07G1718; organism=Gossypium barbadense; type=mRNA; length=619bpback to top protein sequence of GB_A07G1718_ZJU-AD2_v1.1.a1 >GB_A07G1718_ZJU-AD2_v1.1.a1 ID=GB_A07G1718_ZJU-AD2_v1.1.a1; Name=GB_A07G1718_ZJU-AD2_v1.1.a1; organism=Gossypium barbadense; type=polypeptide; length=206bpback to top mRNA from alignment at A07:41877656..41878499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>GB_A07G1718_ZJU-AD2_v1.1.a1 ID=GB_A07G1718_ZJU-AD2_v1.1.a1; Name=GB_A07G1718; organism=Gossypium barbadense; type=mRNA; length=844bp; location=Sequence derived from: A07:41877656..41878499- (Gossypium barbadenseback to top Coding sequence (CDS) from alignment at A07:41877656..41878499- >GB_A07G1718_ZJU-AD2_v1.1.a1 ID=GB_A07G1718_ZJU-AD2_v1.1.a1; Name=GB_A07G1718; organism=Gossypium barbadense; type=CDS; length=619bp; location=Sequence derived from: A07:41877656..41878499- (Gossypium barbadenseback to top |