GH_D07G1543, GH_D07G1543_ZJU-AD1_v2.1.a1 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|1029134961|ref|XP_016745615.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 385.956 bits (990), Expect = 1.085e-135 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|823124891|ref|XP_012481995.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X3 [Gossypium raimondii] >gi|763739224|gb|KJB06723.1| hypothetical protein B456_001G159800 [Gossypium raimondii] >gi|763739228|gb|KJB06727.1| hypothetical protein B456_001G159800 [Gossypium raimondii] >gi|763739230|gb|KJB06729.1| hypothetical protein B456_001G159800 [Gossypium raimondii]) HSP 1 Score: 383.259 bits (983), Expect = 1.544e-134 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTF Q
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFGQ 189
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|728838539|gb|KHG17982.1| (hypothetical protein F383_00908 [Gossypium arboreum]) HSP 1 Score: 377.867 bits (969), Expect = 1.674e-132 Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKES AEEEDACPICLEEYGTE PKLITKCEHHFHLSCILEWMERSDTCPIC QEMILNQTFDQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESMAEEEDACPICLEEYGTEIPKLITKCEHHFHLSCILEWMERSDTCPICDQEMILNQTFDQ 189
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|1050556322|ref|XP_017618654.1| (PREDICTED: probable E3 ubiquitin-protein ligase RHB1A isoform X3 [Gossypium arboreum] >gi|1050556325|ref|XP_017618754.1| PREDICTED: probable E3 ubiquitin-protein ligase RHB1A isoform X3 [Gossypium arboreum]) HSP 1 Score: 375.17 bits (962), Expect = 1.955e-131 Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKES AEEEDACPICLEEYGTE PKLITKCEHHFHLSCILEWMERSDTCPIC QEM LNQTFDQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESMAEEEDACPICLEEYGTEIPKLITKCEHHFHLSCILEWMERSDTCPICDQEMKLNQTFDQ 189
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|823124894|ref|XP_012482007.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X4 [Gossypium raimondii] >gi|1029134967|ref|XP_016745618.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X3 [Gossypium hirsutum] >gi|763739225|gb|KJB06724.1| hypothetical protein B456_001G159800 [Gossypium raimondii]) HSP 1 Score: 363.999 bits (933), Expect = 5.807e-127 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|1029134964|ref|XP_016745616.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 363.229 bits (931), Expect = 9.152e-127 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|763739226|gb|KJB06725.1| (hypothetical protein B456_001G159800 [Gossypium raimondii]) HSP 1 Score: 365.155 bits (936), Expect = 1.277e-126 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|823124887|ref|XP_012481981.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X2 [Gossypium raimondii] >gi|823124889|ref|XP_012481989.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X2 [Gossypium raimondii] >gi|763739229|gb|KJB06728.1| hypothetical protein B456_001G159800 [Gossypium raimondii]) HSP 1 Score: 363.229 bits (931), Expect = 3.606e-126 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|763739227|gb|KJB06726.1| (hypothetical protein B456_001G159800 [Gossypium raimondii]) HSP 1 Score: 360.533 bits (924), Expect = 1.255e-125 Identity = 178/183 (97.27%), Postives = 178/183 (97.27%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPIC L
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICDTYWFL 183
BLAST of GH_D07G1543 vs. NCBI nr
Match: gi|823124885|ref|XP_012481972.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 360.918 bits (925), Expect = 4.303e-125 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPIC 177
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPIC
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPIC 177
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.664e-68 Identity = 111/191 (58.12%), Postives = 131/191 (68.59%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLE--VPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKT-QSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFD 188
MGGCC SSRK L GTPVYYYCP + EE G SA LV++ LE +PDTF PAPLPYD++LG PQ TDSES + +S SFETL TCEDL ESDCKT S ++LSPRKS+ SK K EEED CPIC E+Y ENP+L TKCEH FHLSC+LEW+ERSD CPIC +E++ + +
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.643e-25 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0
Query: 51 DLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLE----ESDCKTQS-GL----------------------------LLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
D + + FR P PLPYD D FR +SR + + E++E +SD ++S G+ +L R + +E+ +E+ED CP CLEEY +ENPK++TKC HHFHLSCI EWMERS+ CP+CG+ M N+T
Sbjct: 70 DNFLSEAFRSTPRPLPYDA--------DPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: AIRP1_ARATH (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.722e-20 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0
Query: 125 ESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
E K+ E D CPICLEEY +NPKL+TKC H FHL+CIL WMERS+ CP+C +E++L ++
Sbjct: 92 ELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 153
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.099e-12 Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 134 EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
+DAC ICLE + ++P +T C+H +HL CI+EW +RS CPIC Q +L
Sbjct: 43 DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVL 92
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 9.320e-11 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query: 134 EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
+DAC ICLE + +P +T C+H +HL CILEW +RS CP+C Q + L
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISL 79
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RN139_MOUSE (E3 ubiquitin-protein ligase RNF139 OS=Mus musculus OX=10090 GN=Rnf139 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 3.321e-8 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
Query: 119 EVSKLTESKESTAEE-EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
+++ L E K S +E +D C IC E+ T IT C H+FH C+ +W+ DTCP+C Q++ +
Sbjct: 528 KINSLPEIKGSHLQEIDDVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYI 591
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RN139_PONAB (E3 ubiquitin-protein ligase RNF139 OS=Pongo abelii OX=9601 GN=RNF139 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.935e-8 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 119 EVSKLTESKESTAEE-EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
+++ L E K S +E D C IC E+ T IT C H+FH C+ +W+ DTCP+C Q++ +
Sbjct: 528 KINSLPEIKGSRLQEINDVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYI 591
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RN139_HUMAN (E3 ubiquitin-protein ligase RNF139 OS=Homo sapiens OX=9606 GN=RNF139 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.935e-8 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 119 EVSKLTESKESTAEE-EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
+++ L E K S +E D C IC E+ T IT C H+FH C+ +W+ DTCP+C Q++ +
Sbjct: 528 KINSLPEIKGSRLQEINDVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYI 591
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: TRC8_DROME (Protein TRC8 homolog OS=Drosophila melanogaster OX=7227 GN=Trc8 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 8.133e-8 Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 0
Query: 105 CKTQSGL-LLSPRKSEVSKLTESKESTAEE----EDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
C+ ++G + R+S V K++ E+T + +D C IC +E + IT+C H FH C+ +W+ D CP+C + M+ D+
Sbjct: 584 CEARAGWSVFMKRRSAVHKISALPEATPAQLQAFDDVCAICYQEMYSAK---ITRCRHFFHGVCLRKWLYVQDRCPLCHEIMMYTDKADE 670
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.049e-7 Identity = 23/65 (35.38%), Postives = 39/65 (60.00%), Query Frame = 0
Query: 117 KSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
K+ V L + S+A+ + CP+CL E+ E + C H FH +CIL W+ ++++CP+C E+
Sbjct: 68 KAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132
BLAST of GH_D07G1543 vs. TAIR10
Match: AT4G00335.2 (| Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-147962 FORWARD LENGTH=190) HSP 1 Score: 209.534 bits (532), Expect = 1.922e-69 Identity = 111/191 (58.12%), Postives = 131/191 (68.59%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLE--VPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKT-QSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFD 188
MGGCC SSRK L GTPVYYYCP + EE G SA LV++ LE +PDTF PAPLPYD++LG PQ TDSES + +S SFETL TCEDL ESDCKT S ++LSPRKS+ SK K EEED CPIC E+Y ENP+L TKCEH FHLSC+LEW+ERSD CPIC +E++ + +
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190
BLAST of GH_D07G1543 vs. TAIR10
Match: AT4G00335.1 (| Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-147962 FORWARD LENGTH=190) HSP 1 Score: 209.534 bits (532), Expect = 1.922e-69 Identity = 111/191 (58.12%), Postives = 131/191 (68.59%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLE--VPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKT-QSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFD 188
MGGCC SSRK L GTPVYYYCP + EE G SA LV++ LE +PDTF PAPLPYD++LG PQ TDSES + +S SFETL TCEDL ESDCKT S ++LSPRKS+ SK K EEED CPIC E+Y ENP+L TKCEH FHLSC+LEW+ERSD CPIC +E++ + +
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190
BLAST of GH_D07G1543 vs. TAIR10
Match: AT4G00335.3 (| Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-147957 FORWARD LENGTH=189) HSP 1 Score: 204.527 bits (519), Expect = 1.873e-67 Identity = 110/182 (60.44%), Postives = 126/182 (69.23%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLE--VPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKT-QSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
MGGCC SSRK L GTPVYYYCP + EE G SA LV++ LE +PDTF PAPLPYD++LG PQ TDSES + +S SFETL TCEDL ESDCKT S ++LSPRKS+ SK K EEED CPIC E+Y ENP+L TKCEH FHLSC+LEW+ERSD CPIC +
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G41350.1 (| Symbols: | RING/U-box superfamily protein | chr5:16542026-16543092 REVERSE LENGTH=212) HSP 1 Score: 157.918 bits (398), Expect = 6.453e-49 Identity = 90/213 (42.25%), Postives = 126/213 (59.15%), Query Frame = 0
Query: 1 MGGCCC--SSRKPLLHGTPVYYYCPPALEENESVT-PHDGSASAMAARFLV---NLDLEVPDTFRPPPAPLPYDVVLGCPQ-------------------STDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFD 188
MGGCCC SSR+ + P YYY P A EE ++ H+ ++SA++ +V NL+ PD + PPP P P+DV +G PQ S ++ES +ET+ G +PT +E+D K Q+ + L + KL+++ EEE+ CPICLEEY ENPKL+ KC+HHFHL+CILEWMERS+TCP+C +EM+ + T D
Sbjct: 1 MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSSPDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVD-GITLGVPTTCSHKETDSKIQTEIDLESTEEIDPKLSKAVFIPIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFDSTLD 212
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G15790.2 (| Symbols: | RING/U-box superfamily protein | chr5:5149800-5150964 FORWARD LENGTH=232) HSP 1 Score: 101.679 bits (252), Expect = 8.243e-27 Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 0
Query: 34 PHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVV----------------------------LGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
P A+ ++ + D + +TF P PLPYD L DSESF S+ + + + + ED +E ++ +L S +S E T+++ED CP CLEEY +ENPK++TKC HHFHLSCI EWMERS+ CP+CG+ M ++T
Sbjct: 54 PSSLQATNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLRSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQS---RTMSTSNEGLYITSDDEDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G15790.1 (| Symbols: | RING/U-box superfamily protein | chr5:5149800-5150964 FORWARD LENGTH=232) HSP 1 Score: 101.679 bits (252), Expect = 8.243e-27 Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 0
Query: 34 PHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVV----------------------------LGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
P A+ ++ + D + +TF P PLPYD L DSESF S+ + + + + ED +E ++ +L S +S E T+++ED CP CLEEY +ENPK++TKC HHFHLSCI EWMERS+ CP+CG+ M ++T
Sbjct: 54 PSSLQATNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLRSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQS---RTMSTSNEGLYITSDDEDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
BLAST of GH_D07G1543 vs. TAIR10
Match: AT3G02290.1 (| Symbols: | RING/U-box superfamily protein | chr3:459385-460688 FORWARD LENGTH=231) HSP 1 Score: 100.908 bits (250), Expect = 1.907e-26 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0
Query: 51 DLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLE----ESDCKTQS-GL----------------------------LLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
D + + FR P PLPYD D FR +SR + + E++E +SD ++S G+ +L R + +E+ +E+ED CP CLEEY +ENPK++TKC HHFHLSCI EWMERS+ CP+CG+ M N+T
Sbjct: 70 DNFLSEAFRSTPRPLPYDA--------DPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G38895.1 (| Symbols: | RING/U-box superfamily protein | chr5:15572084-15573315 FORWARD LENGTH=221) HSP 1 Score: 98.5969 bits (244), Expect = 1.255e-25 Identity = 57/152 (37.50%), Postives = 79/152 (51.97%), Query Frame = 0
Query: 50 LDLEVPDTFRPPPAPLPYDV-------VLGC--------PQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
LD + + PP PLPYD V G P D+E E L G + + D E+ + + + KS+ E + +++ED CP CL++Y ENPK+ITKC HHFHLSCI EWMERS+TCP+CG+ M ++
Sbjct: 69 LDDSLSSVYHSPPTPLPYDADPRYFRFVKGSSHSGEESEPLRGDTEMSSEALGDGGAKWSKS--DSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 218
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G38895.3 (| Symbols: | RING/U-box superfamily protein | chr5:15571302-15573315 FORWARD LENGTH=326) HSP 1 Score: 98.9821 bits (245), Expect = 5.815e-25 Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 0
Query: 50 LDLEVPDTFRPPPAPLPYDV-------VLGC--------PQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
LD + + PP PLPYD V G P D+E E L G + + + + T+ + KS+ E + +++ED CP CL++Y ENPK+ITKC HHFHLSCI EWMERS+TCP+CG+ M ++
Sbjct: 174 LDDSLSSVYHSPPTPLPYDADPRYFRFVKGSSHSGEESEPLRGDTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFT--KSKTMPGIEVYYADSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 323
BLAST of GH_D07G1543 vs. TAIR10
Match: AT5G38895.2 (| Symbols: | RING/U-box superfamily protein | chr5:15571321-15573315 FORWARD LENGTH=296) HSP 1 Score: 98.2117 bits (243), Expect = 5.915e-25 Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 0
Query: 50 LDLEVPDTFRPPPAPLPYDV-------VLGC--------PQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQT 186
LD + + PP PLPYD V G P D+E E L G + + + + T+ + KS+ E + +++ED CP CL++Y ENPK+ITKC HHFHLSCI EWMERS+TCP+CG+ M ++
Sbjct: 144 LDDSLSSVYHSPPTPLPYDADPRYFRFVKGSSHSGEESEPLRGDTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFT--KSKTMPGIEVYYADSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 293
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A1U8P3B0_GOSHI (E3 ubiquitin-protein ligase At3g02290-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107954539 PE=4 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 9.114e-136 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0D2LRS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159800 PE=4 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 1.297e-134 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTF Q
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFGQ 189
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0B0NZA3_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_00908 PE=4 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 1.406e-132 Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKES AEEEDACPICLEEYGTE PKLITKCEHHFHLSCILEWMERSDTCPIC QEMILNQTFDQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESMAEEEDACPICLEEYGTEIPKLITKCEHHFHLSCILEWMERSDTCPICDQEMILNQTFDQ 189
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0D2PIV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159800 PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 4.878e-127 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A1U8P5M9_GOSHI (E3 ubiquitin-protein ligase At3g02290-like isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107954539 PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 4.878e-127 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQ 179
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A1U8P329_GOSHI (E3 ubiquitin-protein ligase At3g02290-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107954539 PE=4 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 7.688e-127 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0D2QHK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159800 PE=4 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 1.072e-126 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0D2N320_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159800 PE=4 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 3.029e-126 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEM 181
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICG ++
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGNDI 181
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A0D2PRV2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159800 PE=4 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 1.055e-125 Identity = 178/183 (97.27%), Postives = 178/183 (97.27%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMIL 183
MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPIC L
Sbjct: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQSGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICDTYWFL 183
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Match: A0A061DU32_THECC (RING-H2 finger B1A OS=Theobroma cacao OX=3641 GN=TCM_005300 PE=4 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 5.588e-120 Identity = 172/190 (90.53%), Postives = 177/190 (93.16%), Query Frame = 0
Query: 1 MGGCCCSSRKPLLHGTPVYYYCPPALEENESVTPHDGSASAMAARFLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETLSRGSFETLPTCEDLEESDCKTQ-SGLLLSPRKSEVSKLTESKESTAEEEDACPICLEEYGTENPKLITKCEHHFHLSCILEWMERSDTCPICGQEMILNQTFDQ 189
MGGCCCSSRKP LHGTPVYYYCPPALEEN+S+TPHDGSASAMAA LVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRET+S GSFETLPTCEDLEESDCKTQ S LLLSPRKSEVSKLTE KE EEEDACPICLEEY +ENPKLITKCEHHFHLSCILEWMERSDTCPIC QEMI +QTFDQ
Sbjct: 1 MGGCCCSSRKPHLHGTPVYYYCPPALEENDSLTPHDGSASAMAAGLLVNLDLEVPDTFRPPPAPLPYDVVLGCPQSTDSESFRETISGGSFETLPTCEDLEESDCKTQSSSLLLSPRKSEVSKLTEPKELLTEEEDACPICLEEYDSENPKLITKCEHHFHLSCILEWMERSDTCPICDQEMIFDQTFDQ 190 The following BLAST results are available for this feature:
BLAST of GH_D07G1543 vs. NCBI nr
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of GH_D07G1543 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 10
BLAST of GH_D07G1543 vs. TAIR10
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs arabidopsis TAIR10) Total hits: 10
BLAST of GH_D07G1543 vs. ExPASy TrEMBL
Analysis Date: 2019-03-29 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZJU v2.1 Gossypium hirsutum proteins
Date Performed: 2019-03-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >GH_D07G1543_ZJU-AD1_v2.1.a1 ID=GH_D07G1543_ZJU-AD1_v2.1.a1; Name=GH_D07G1543; organism=Gossypium hirsutum; type=mRNA; length=570bpback to top protein sequence of GH_D07G1543_ZJU-AD1_v2.1.a1 >GH_D07G1543_ZJU-AD1_v2.1.a1 ID=GH_D07G1543_ZJU-AD1_v2.1.a1; Name=GH_D07G1543_ZJU-AD1_v2.1.a1; organism=Gossypium hirsutum; type=polypeptide; length=189bpback to top mRNA from alignment at D07:23162305..23164053+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>GH_D07G1543_ZJU-AD1_v2.1.a1 ID=GH_D07G1543_ZJU-AD1_v2.1.a1; Name=GH_D07G1543; organism=Gossypium hirsutum; type=mRNA; length=1749bp; location=Sequence derived from: D07:23162305..23164053+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at D07:23162305..23164053+ >GH_D07G1543_ZJU-AD1_v2.1.a1 ID=GH_D07G1543_ZJU-AD1_v2.1.a1; Name=GH_D07G1543; organism=Gossypium hirsutum; type=CDS; length=570bp; location=Sequence derived from: D07:23162305..23164053+ (Gossypium hirsutumback to top |