EVM_prediction_Ga12G0339, evm.model.Ga12G0339_CRI-A2_v1.0.a1 (mRNA) Gossypium arboreum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|1050648653|ref|XP_017647678.1| (PREDICTED: LOW QUALITY PROTEIN: caffeic acid 3-O-methyltransferase [Gossypium arboreum]) HSP 1 Score: 141.354 bits (355), Expect = 5.975e-40 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query: 5 YYLKGSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
YYLKGSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG
Sbjct: 74 YYLKGSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 137
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|763785422|gb|KJB52493.1| (hypothetical protein B456_008G264900 [Gossypium raimondii] >gi|763785423|gb|KJB52494.1| hypothetical protein B456_008G264900 [Gossypium raimondii]) HSP 1 Score: 77.0258 bits (188), Expect = 3.816e-15 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FNKGM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 159 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNKGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 231
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|823214372|ref|XP_012439937.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X2 [Gossypium raimondii] >gi|763785421|gb|KJB52492.1| hypothetical protein B456_008G264900 [Gossypium raimondii]) HSP 1 Score: 77.0258 bits (188), Expect = 8.834e-15 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FNKGM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 159 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNKGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 231
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|823214370|ref|XP_012439936.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 77.0258 bits (188), Expect = 8.867e-15 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FNKGM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 159 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNKGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 231
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|763756625|gb|KJB23956.1| (hypothetical protein B456_004G125600 [Gossypium raimondii]) HSP 1 Score: 75.0998 bits (183), Expect = 1.512e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|1344110832|gb|PPD84377.1| (hypothetical protein GOBAR_DD18692 [Gossypium barbadense]) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FN+GM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNRGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|763756624|gb|KJB23955.1| (hypothetical protein B456_004G125600 [Gossypium raimondii]) HSP 1 Score: 75.0998 bits (183), Expect = 1.898e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|763756626|gb|KJB23957.1| (hypothetical protein B456_004G125600 [Gossypium raimondii]) HSP 1 Score: 75.0998 bits (183), Expect = 2.385e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|1029117549|ref|XP_016737250.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 75.0998 bits (183), Expect = 2.641e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 75 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 147
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Match: gi|360047732|gb|AEV93478.1| (caffeic acid O-methyltransferase [Caragana korshinskii]) HSP 1 Score: 75.485 bits (184), Expect = 2.679e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FNKGM DHST MKKILE+Y GF+GLK+LVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILELYTGFEGLKSLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT5G54160.1 (| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363) HSP 1 Score: 67.0106 bits (162), Expect = 7.724e-15 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NK+FN GM +HST MKKILE Y GF+GL +LVDVGG
Sbjct: 163 YHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGG 207
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G51990.1 (| Symbols: | O-methyltransferase family protein | chr1:19330949-19332667 FORWARD LENGTH=363) HSP 1 Score: 53.5286 bits (127), Expect = 5.297e-10 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0
Query: 8 KGSAGRWNSIQQDQWW-YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
+G A W + + Y + + L KIFN+ M +H++ MKKILE Y GF+G+ VDVGG
Sbjct: 146 EGGASAWERANEALIFEYMKKNENLKKIFNESMTNHTSIVMKKILENYIGFEGVSDFVDVGG 207
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G51990.2 (| Symbols: | O-methyltransferase family protein | chr1:19330949-19332667 FORWARD LENGTH=363) HSP 1 Score: 53.1434 bits (126), Expect = 5.509e-10 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0
Query: 8 KGSAGRWNSIQQDQWW-YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
+G A W + + Y + + L KIFN+ M +H++ MKKILE Y GF+G+ VDVGG
Sbjct: 146 EGGASAWERANEALIFEYMKKNENLKKIFNESMTNHTSIVMKKILENYIGFEGVSDFVDVGG 207
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT5G37170.1 (| Symbols: | O-methyltransferase family protein | chr5:14712811-14714303 FORWARD LENGTH=334) HSP 1 Score: 50.447 bits (119), Expect = 4.738e-9 Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query: 27 TDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
TD + IFN+ M D ST M KILE+Y G + + TLVD+GG
Sbjct: 137 TDEQFAAIFNQAMSDSSTMIMTKILEVYKGLKDVNTLVDIGG 178
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G77520.1 (| Symbols: | O-methyltransferase family protein | chr1:29130557-29132007 FORWARD LENGTH=381) HSP 1 Score: 50.0618 bits (118), Expect = 6.799e-9 Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y +D ++FN+ M + ST MKK+L++Y GF+ + TLVDVGG
Sbjct: 182 YINSDQPFAELFNRAMSEPSTMIMKKVLDVYRGFEDVNTLVDVGG 226
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT5G53810.1 (| Symbols: | O-methyltransferase family protein | chr5:21850329-21852762 REVERSE LENGTH=378) HSP 1 Score: 47.7506 bits (112), Expect = 5.363e-8 Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDV 66
Y + D + K+FN+ M + ST +K+L+ Y GF+ +KTLVDV
Sbjct: 179 YIQADERFGKVFNRAMLESSTMVTEKVLKFYEGFKDVKTLVDV 221
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G77530.1 (| Symbols: | O-methyltransferase family protein | chr1:29136037-29137423 FORWARD LENGTH=381) HSP 1 Score: 46.595 bits (109), Expect = 1.271e-7 Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDV 66
Y +D + +K+F++ M + ST MKK+LE Y GF+ + TLVDV
Sbjct: 182 YISSDDQFSKLFHRAMSESSTMVMKKVLEEYRGFEDVNTLVDV 224
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G63140.1 (| Symbols: | O-methyltransferase family protein | chr1:23417517-23418548 FORWARD LENGTH=286) HSP 1 Score: 45.4394 bits (106), Expect = 3.660e-7 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 27 TDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDV 66
++ + ++FN+ M + ST MKK+LE+Y GF+ + TLVDV
Sbjct: 185 SNEQFAEMFNRAMSEASTLIMKKVLEVYKGFEDVNTLVDV 224
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G63140.2 (| Symbols: | O-methyltransferase family protein | chr1:23417517-23418875 FORWARD LENGTH=381) HSP 1 Score: 45.4394 bits (106), Expect = 3.807e-7 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 27 TDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDV 66
++ + ++FN+ M + ST MKK+LE+Y GF+ + TLVDV
Sbjct: 185 SNEQFAEMFNRAMSEASTLIMKKVLEVYKGFEDVNTLVDV 224
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Match: AT1G62900.1 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:23297792-23298536 FORWARD LENGTH=205) HSP 1 Score: 43.8986 bits (102), Expect = 8.012e-7 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 27 TDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDV 66
++ + ++FN+ M + ST MKK+LE+Y GF+ + TLVDV
Sbjct: 9 SNEQFAEMFNRTMSEASTLIMKKVLEVYKGFEDVNTLVDV 48
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_ZINVI (Caffeic acid 3-O-methyltransferase OS=Zinnia violacea OX=34245 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.456e-16 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y D + NK+FN GMF+HST MKKI+E+Y GF GLKTLVDVGG
Sbjct: 128 MESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGG 200
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa OX=3879 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.494e-16 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NK+FNKGM DHST MKKILE Y GF+GLK+LVDVGG
Sbjct: 165 YHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii OX=3933 GN=OMT PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.015e-15 Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NKIFN+GM DHST MKKILE Y GF+GL+T+VDVGG
Sbjct: 138 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGG 210
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides OX=3693 GN=OMT1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-15 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FNKGM DHST MKKILE Y GF+GL +LVDVGG
Sbjct: 137 MESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis OX=34292 GN=HOMT1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-15 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FNKGM DHST MKKILE Y GF+GL +LVDVGG
Sbjct: 137 MESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora OX=49390 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.146e-15 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NK+FN+GM +HST MKKILE+Y GF+GLKT+VDVGG
Sbjct: 152 YHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGG 196
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus OX=34317 GN=COMT1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.207e-15 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NKIFN+ M DHST MKKILE Y GF+GLKT+VDVGG
Sbjct: 147 YPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGG 191
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus OX=4058 GN=COMT1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.298e-15 Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y D + NK+FN+GM +HST MKKILEIY GFQGLKT+VDVGG
Sbjct: 165 YHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis OX=74649 GN=COMT1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.348e-15 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NK+FNKGM DHST MKKILE Y GF+GL ++VDVGG
Sbjct: 165 YHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis OX=34292 GN=HOMT3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.160e-14 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 24 YDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
Y TD + NK+FNKGM DHS AMKKILE Y GF+GL +LVDVGG
Sbjct: 164 YHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGG 208
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2RMU5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G264900 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.206e-15 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FNKGM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 159 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNKGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 231
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2Q2B5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G264900 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.421e-15 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FNKGM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 159 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNKGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 231
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2R3E7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G125600 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.270e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A2P5RC59_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD18692 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.552e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD++ NK+FN+GM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDTRFNKVFNRGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2RY01_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G125600 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.595e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2MX95_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G125600 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.004e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A1U8NE00_GOSHI (caffeic acid 3-O-methyltransferase-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107947186 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.218e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 75 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 147
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: V9I5V1_9FABA (Caffeic acid O-methyltransferase OS=Caragana korshinskii OX=220689 GN=COMT PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.251e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FNKGM DHST MKKILE+Y GF+GLK+LVDVGG
Sbjct: 137 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILELYTGFEGLKSLVDVGG 209
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A0D2PAT0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G125600 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.563e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKILE Y GF+GLKTLVDVGG
Sbjct: 90 MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILETYDGFEGLKTLVDVGG 162
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Match: A0A1U8NH16_GOSHI (caffeic acid 3-O-methyltransferase-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107947186 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.902e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 1 MKSCYYLK-----GSAGRWNSIQQDQWWYDRTDSKLNKIFNKGMFDHSTFAMKKILEIYGGFQGLKTLVDVGG 68
M+S YYLK G + + Y TD + NK+FN+GM DHST MKKIL+ Y GFQGLKTLVDVGG
Sbjct: 111 MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILDTYDGFQGLKTLVDVGG 183 The following BLAST results are available for this feature:
BLAST of EVM_prediction_Ga12G0339 vs. NCBI nr
Analysis Date: 2019-03-07 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs NCBI nr) Total hits: 10
BLAST of EVM_prediction_Ga12G0339 vs. TAIR10
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs arabidopsis TAIR10) Total hits: 10
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt Swissprot) Total hits: 10
BLAST of EVM_prediction_Ga12G0339 vs. ExPASy TrEMBL
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for CRI v1.0 Gossypium arboreum proteins
Date Performed: 2019-03-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Ga12G0339_CRI-A2_v1.0.a1 ID=evm.model.Ga12G0339_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga12G0339; organism=Gossypium arboreum; type=mRNA; length=225bpback to top protein sequence of evm.model.Ga12G0339_CRI-A2_v1.0.a1 >evm.model.Ga12G0339_CRI-A2_v1.0.a1 ID=evm.model.Ga12G0339_CRI-A2_v1.0.a1; Name=evm.model.Ga12G0339_CRI-A2_v1.0.a1; organism=Gossypium arboreum; type=polypeptide; length=74bpback to top mRNA from alignment at Chr12_CRI-A2_v1.0.a1:2834110..2834489- Legend: exonCDSpolypeptidegenetic_marker Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Ga12G0339_CRI-A2_v1.0.a1 ID=evm.model.Ga12G0339_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga12G0339; organism=Gossypium arboreum; type=mRNA; length=380bp; location=Sequence derived from: Chr12_CRI-A2_v1.0.a1:2834110..2834489- (Gossypium arboreumback to top Coding sequence (CDS) from alignment at Chr12_CRI-A2_v1.0.a1:2834110..2834489- >evm.model.Ga12G0339_CRI-A2_v1.0.a1 ID=evm.model.Ga12G0339_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga12G0339; organism=Gossypium arboreum; type=CDS; length=225bp; location=Sequence derived from: Chr12_CRI-A2_v1.0.a1:2834110..2834489- (Gossypium arboreumback to top |