EVM_prediction_Ga06G0046, evm.model.Ga06G0046_CRI-A2_v1.0.a1 (mRNA) Gossypium arboreum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1050585256|ref|XP_017613898.1| (PREDICTED: ABC transporter I family member 1-like [Gossypium arboreum]) HSP 1 Score: 257.299 bits (656), Expect = 9.357e-87 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA
Sbjct: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1347710288|gb|PPS07842.1| (hypothetical protein GOBAR_AA12801 [Gossypium barbadense]) HSP 1 Score: 248.825 bits (634), Expect = 2.012e-83 Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
MSMRK TLPRTLLN VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSS YRLQALVA
Sbjct: 1 MSMRKLTLPRTLLNDVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSFYRLQALVA 124
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1028966311|ref|XP_016726676.1| (PREDICTED: ABC transporter I family member 1-like [Gossypium hirsutum]) HSP 1 Score: 244.973 bits (624), Expect = 5.784e-82 Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0
Query: 3 MRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
MRK TLPRTLLN VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSS YRLQALVA
Sbjct: 1 MRKLTLPRTLLNDVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSFYRLQALVA 122
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|590572890|ref|XP_007011970.1| (PREDICTED: ABC transporter I family member 1 [Theobroma cacao] >gi|508782333|gb|EOY29589.1| Non-intrinsic ABC protein 10 [Theobroma cacao]) HSP 1 Score: 206.838 bits (525), Expect = 2.401e-65 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD +QS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFE+
Sbjct: 1 MSLRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDITQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEI 111
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|823243068|ref|XP_012454197.1| (PREDICTED: ABC transporter I family member 1 [Gossypium raimondii] >gi|1028935727|ref|XP_016711019.1| PREDICTED: ABC transporter I family member 1 [Gossypium hirsutum] >gi|1029064949|ref|XP_016692747.1| PREDICTED: ABC transporter I family member 1 [Gossypium hirsutum] >gi|1050649720|ref|XP_017648261.1| PREDICTED: ABC transporter I family member 1 [Gossypium arboreum] >gi|728842965|gb|KHG22408.1| ABC transporter I family member 1 [Gossypium arboreum] >gi|763802750|gb|KJB69688.1| hypothetical protein B456_011G037200 [Gossypium raimondii] >gi|1347688771|gb|PPR90305.1| hypothetical protein GOBAR_AA30372 [Gossypium barbadense]) HSP 1 Score: 206.068 bits (523), Expect = 4.239e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|188509941|gb|ACD56627.1| (putative ABC transporter [Gossypium raimondii]) HSP 1 Score: 206.453 bits (524), Expect = 6.617e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 23 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 133
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1204891856|ref|XP_021277655.1| (ABC transporter I family member 1 [Herrania umbratica]) HSP 1 Score: 204.527 bits (519), Expect = 1.626e-64 Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+RKP LPR LLN VSCMRNAQQILRHVN SVHDG AL+L GSN SGKTTFLR+LAGFSRPSAGQILWNGHD +QS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFE+
Sbjct: 1 MSLRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALMLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDITQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEL 111
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1344115900|gb|PPD89056.1| (hypothetical protein GOBAR_DD13979 [Gossypium barbadense]) HSP 1 Score: 200.675 bits (509), Expect = 1.934e-64 Identity = 100/112 (89.29%), Postives = 102/112 (91.07%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSN-DSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MSMRKPTLPR LLN VSCMRNAQQILRHVNGSVH+G ALVLKGSN DSGKTTFLR+LAGFSRPSA QIL NGHD SQS FHQYKLQLNWLSLKDAVKEKF VLDNVQWFEV
Sbjct: 1 MSMRKPTLPRILLNDVSCMRNAQQILRHVNGSVHNGGALVLKGSNNDSGKTTFLRMLAGFSRPSADQILRNGHDISQSGTFHQYKLQLNWLSLKDAVKEKFIVLDNVQWFEV 112
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1269879224|ref|XP_022750229.1| (ABC transporter I family member 1 [Durio zibethinus]) HSP 1 Score: 203.756 bits (517), Expect = 3.418e-64 Identity = 95/111 (85.59%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+RKP LPR LL+ VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD +QS +FHQYKLQLNWLSLKDA+KEKFTVLDNVQWFE+
Sbjct: 1 MSLRKPPLPRILLHDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDITQSGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEI 111
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Match: gi|1227927004|ref|XP_021899255.1| (ABC transporter I family member 1 [Carica papaya]) HSP 1 Score: 203.371 bits (516), Expect = 5.351e-64 Identity = 96/111 (86.49%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFS+PSAG+ILWNGHD ++S IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MSLRKPPLPRILLNNVSCMRNAQQILRHVNISVHDGGALVLTGSNGSGKTTFLRMLAGFSKPSAGEILWNGHDITKSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. TAIR10
Match: AT1G63270.1 (| Symbols: ATNAP10, NAP10 | non-intrinsic ABC protein 10 | chr1:23469664-23470353 REVERSE LENGTH=229) HSP 1 Score: 190.274 bits (482), Expect = 2.337e-62 Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+R+P +PR LL VSCMRNAQQILRHVN S+HDG ALVL G+N SGK+TFLR+LAGFS+PSAG+ILWNGHD +QS IF QYKLQLNW+SLKDA+KE+FTVLDNVQWFE+
Sbjct: 1 MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFEL 111
BLAST of EVM_prediction_Ga06G0046 vs. TAIR10
Match: AT1G53390.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:19918197-19923579 FORWARD LENGTH=1109) HSP 1 Score: 47.3654 bits (111), Expect = 3.690e-7 Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 21 NAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPS--AGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWF 109
N +Q+LR V GS+ G + G + +GKT+ L LAG + +G IL NG + E H YK + ++ D V TV +N+ WF
Sbjct: 519 NGKQVLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVGCKLSGLILING----KQESIHSYKKIIGFVPQDDVVHGNLTVEENL-WF 604
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: AB1I_ARATH (ABC transporter I family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCI1 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.240e-61 Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+R+P +PR LL VSCMRNAQQILRHVN S+HDG ALVL G+N SGK+TFLR+LAGFS+PSAG+ILWNGHD +QS IF QYKLQLNW+SLKDA+KE+FTVLDNVQWFE+
Sbjct: 1 MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFEL 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_SHIDS (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=ccmA PE=3 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 2.238e-12 Identity = 32/106 (30.19%), Postives = 57/106 (53.77%), Query Frame = 0
Query: 18 CMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALV 123
C R+ + + ++ +++ G + + GSN +GKT LR+L G SRP AG++LW G Q + Y L W+ + +K + T L+N+ ++ + L+AL
Sbjct: 11 CERDERTLFSGLSFTLNAGEWVQITGSNGAGKTMLLRLLTGLSRPDAGEVLWQGQPLHQ--VRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCLEALA 114
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_ALKEH (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=ccmA PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.739e-12 Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = 0
Query: 6 PTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQW 108
P L T L + R + + R + + G L ++G+N SGKTT LR LAG SRP G+IL G Q+ H+ LQ + +D ++ TVL+N+QW
Sbjct: 12 PALEATGLQVA---RGGRPLFRGLGFRLARGGLLCVRGANGSGKTTLLRTLAGLSRPHRGRILRAGRCIRQAANDHRGTLQ--YRGHRDGLRGALTVLENLQW 109
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_MAGSA (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=ccmA PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.656e-11 Identity = 31/94 (32.98%), Postives = 55/94 (58.51%), Query Frame = 0
Query: 16 VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWF 109
++C+R + + + S+ G ALVL G N SGK++ LR+LAG +P+ G + WNG ++ H + ++L DAVK +V +N++++
Sbjct: 11 LACVRGGRVVFAGLGFSLSAGGALVLLGPNGSGKSSLLRVLAGLLKPAHGLLAWNGEALAEDPEAHAAR--THYLGHHDAVKPVLSVAENLRFW 102
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_PSE14 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=ccmA PE=3 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 3.531e-11 Identity = 32/104 (30.77%), Postives = 52/104 (50.00%), Query Frame = 0
Query: 6 PTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWF 109
P P ++C R+ + + +++ V G L + G N SGKT+ LR+L G +P+AG +L NG + L L W+ A+K+ T L+N+ W
Sbjct: 3 PAPPFLQATALTCERDGRMLFENLDLQVRTGDMLQVSGPNGSGKTSLLRLLCGLMQPTAGHVLLNGQPAGRQPT--APGLNLLWVGHASALKDLLTPLENLSWL 104
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_ALIF1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=ccmA PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.026e-10 Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 0
Query: 16 VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQS-EIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQAL 122
V+C+R+ + + +N ++ DG + ++G N +GKTT LRI+AG G I W Q+ E FH L +L VK + T +N+ +++ SM Y A+
Sbjct: 7 VTCIRDERVLFERLNFTISDGELIQIEGQNGAGKTTLLRIIAGLGYADEGDIFWKNESIKQNREEFHS---DLLFLGHHTGVKRELTAFENLAFYQ-SMHDNYNEAAI 110
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_SODGM (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=ccmA PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.052e-10 Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0
Query: 16 VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFE 110
++C+R+ +Q+ +N G + ++GSN +GKT LRILAG + P AG+I W Q Y +L ++ + A+K T +N+ +++
Sbjct: 6 LACVRDERQLFSGLNEEFAPGDGVQIEGSNGAGKTLLLRILAGLTPPDAGEIRWRQRPLRQCR--SDYYRELVYIGHRAAIKPVLTPRENLTFYQ 98
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_HAEIN (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ccmA PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.282e-10 Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 16 VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTS-QSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFE 110
+SC R + + R + + G + ++G N GKT+ LRILAG RP G++ W+ S Q E +HQ L L LS VK + T +N+Q+++
Sbjct: 12 LSCQRGERVLFRALTCDFNSGDFVQIEGHNGIGKTSLLRILAGLVRPLEGEVRWDSEAISKQREQYHQNLLYLGHLS---GVKPELTAWENLQFYQ 104
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: FBPC_PSEPF (Fe(3+) ions import ATP-binding protein FbpC OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=fbpC PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.340e-10 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0
Query: 21 NAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHD-TSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQW--FEVSMSSLYRLQALV 123
AQ L +N SV G V+ G + SGKTT LR++AGF P AG ++ NG ++ Y+ Q+ ++ A+ TV DN+ + E + R+QAL+
Sbjct: 14 GAQTALDSINLSVPTGSRTVIVGPSGSGKTTLLRMIAGFEFPDAGSLMLNGQTLVDRTHAVPAYQRQIGYVPQDGALFPHMTVADNIGFGLAETGSARAERIQALM 119
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Match: CCMA_TATCI (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Tatumella citrea OX=53336 GN=ccmA PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.791e-10 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 16 VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTS-QSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQAL 122
++C R+ + + ++ +V G + ++G N +GKT+ LRILAG SRP +G+ILWN Q +I+ + L L L VK + L+N+++F S AL
Sbjct: 7 LTCARDERVLFSQLSFTVGAGNIVQIEGPNGAGKTSLLRILAGLSRPESGEILWNQTAVGRQRDIWQREMLYLGHLP---GVKGVLSPLENLRFFHPDCSDEQIFDAL 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A2P5XWW3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12801 PE=4 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.690e-83 Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
MSMRK TLPRTLLN VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSS YRLQALVA
Sbjct: 1 MSMRKLTLPRTLLNDVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSFYRLQALVA 124
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A1U8MIK5_GOSHI (ABC transporter I family member 1-like OS=Gossypium hirsutum OX=3635 GN=LOC107938120 PE=4 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.859e-82 Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0
Query: 3 MRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSLYRLQALVA 124
MRK TLPRTLLN VSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSS YRLQALVA
Sbjct: 1 MRKLTLPRTLLNDVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVSMSSFYRLQALVA 122
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A061GR36_THECC (Non-intrinsic ABC protein 10 OS=Theobroma cacao OX=3641 GN=TCM_037087 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.017e-65 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MS+RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD +QS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFE+
Sbjct: 1 MSLRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDITQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEI 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A2P5WGX2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30372 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.561e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A0D2T1X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G037200 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.561e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A0B0P6R5_GOSAR (ABC transporter I family member 1 OS=Gossypium arboreum OX=29729 GN=F383_08777 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.561e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A1U8LCX0_GOSHI (ABC transporter I family member 1 OS=Gossypium hirsutum OX=3635 GN=LOC107924952 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.561e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: B2ZAR0_GOSRA (Putative ABC transporter OS=Gossypium raimondii OX=29730 PE=4 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 5.559e-65 Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPSAGQILWNGHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 23 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 133
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: A0A2P5RQH2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD13979 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.624e-64 Identity = 100/112 (89.29%), Postives = 102/112 (91.07%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSN-DSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
MSMRKPTLPR LLN VSCMRNAQQILRHVNGSVH+G ALVLKGSN DSGKTTFLR+LAGFSRPSA QIL NGHD SQS FHQYKLQLNWLSLKDAVKEKF VLDNVQWFEV
Sbjct: 1 MSMRKPTLPRILLNDVSCMRNAQQILRHVNGSVHNGGALVLKGSNNDSGKTTFLRMLAGFSRPSADQILRNGHDISQSGTFHQYKLQLNWLSLKDAVKEKFIVLDNVQWFEV 112
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Match: B2ZAS3_9ROSI (Putative ABC transporter OS=Gossypioides kirkii OX=47615 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.089e-63 Identity = 97/111 (87.39%), Postives = 101/111 (90.99%), Query Frame = 0
Query: 1 MSMRKPTLPRTLLNLVSCMRNAQQILRHVNGSVHDGVALVLKGSNDSGKTTFLRILAGFSRPSAGQILWNGHDTSQSEIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111
M +RKP LPR LLN VSCMRNAQQILRHVN SVHDG ALVL GSN SGKTTFLR+LAGFSRPS+GQILW+GHD SQS IFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV
Sbjct: 1 MPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNVSGKTTFLRMLAGFSRPSSGQILWSGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEV 111 The following BLAST results are available for this feature:
BLAST of EVM_prediction_Ga06G0046 vs. NCBI nr
Analysis Date: 2019-03-07 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs NCBI nr) Total hits: 10
BLAST of EVM_prediction_Ga06G0046 vs. TAIR10
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs arabidopsis TAIR10) Total hits: 2
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt Swissprot) Total hits: 10
BLAST of EVM_prediction_Ga06G0046 vs. ExPASy TrEMBL
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for CRI v1.0 Gossypium arboreum proteins
Date Performed: 2019-03-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Ga06G0046_CRI-A2_v1.0.a1 ID=evm.model.Ga06G0046_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga06G0046; organism=Gossypium arboreum; type=mRNA; length=375bpback to top protein sequence of evm.model.Ga06G0046_CRI-A2_v1.0.a1 >evm.model.Ga06G0046_CRI-A2_v1.0.a1 ID=evm.model.Ga06G0046_CRI-A2_v1.0.a1; Name=evm.model.Ga06G0046_CRI-A2_v1.0.a1; organism=Gossypium arboreum; type=polypeptide; length=124bpback to top mRNA from alignment at Chr06_CRI-A2_v1.0.a1:242746..243120+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Ga06G0046_CRI-A2_v1.0.a1 ID=evm.model.Ga06G0046_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga06G0046; organism=Gossypium arboreum; type=mRNA; length=375bp; location=Sequence derived from: Chr06_CRI-A2_v1.0.a1:242746..243120+ (Gossypium arboreumback to top Coding sequence (CDS) from alignment at Chr06_CRI-A2_v1.0.a1:242746..243120+ >evm.model.Ga06G0046_CRI-A2_v1.0.a1 ID=evm.model.Ga06G0046_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga06G0046; organism=Gossypium arboreum; type=CDS; length=375bp; location=Sequence derived from: Chr06_CRI-A2_v1.0.a1:242746..243120+ (Gossypium arboreumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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