Gbar_A03G010430.5, Gbar_A03G010430.5 (mRNA) Gossypium barbadense

Transcript Overview
NameGbar_A03G010430.5
Unique NameGbar_A03G010430.5_HAU-AD2_v2.0
TypemRNA
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1343
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Gbar_A03chromosomeGbar_A03:44288194..44289933 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
bhgbL1498Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhgbL3886Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbhnR3211Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
gbhnR3263Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
gbhnR3281Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
gbhbR4105Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
gbhbR4151Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
gbghR2202Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbghR2251Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbgbL0566Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbgbL0857Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbrjR1807Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
gbrbR3033Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
gbrbR3107Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
gbhjR2952Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
gbhjR2972Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
gbhjR3022Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
gbhjR3033Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
bzgbL0773Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzgbL2204Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gbhzR2846Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
gbhzR2870Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
gbhzR2919Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
gbhzR2931Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
gbgkR1899Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gbgkR1924Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gbghzR2549Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gbghzR2603Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gbghtR2801Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gbghtR2821Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gbghtR2880Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
adgbL0825Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adgbL2320Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
gbhgsR2381Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
gbhgsR2439Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
gbtoR2408Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gbtoR2467Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gbgdR2647Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gbgdR2702Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gbhwR2339Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
gbhwR2364Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
gbtwR2924Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
gbtwR2971Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
gbtwR2983Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
gbuhR2393Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
gbuhR2446Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
gbgtiR2276Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gbgtiR2301Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gbpimR2987Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
gbpimR3008Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
gbpimR3054Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
gbpimR3063Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
g2bgbL0756Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
g2bgbL2185Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
gbgbmR2822Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
gbgbmR2843Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
gbgbmR2886Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
gbgbmR2897Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a5zgbL0773Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a5zgbL2221Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
azbgbL0754Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbgbL2193Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
gbyumR2877Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
gbyumR2900Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
gbyumR2947Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
gbyumR2959Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
g7igbL0764Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
g7igbL2173Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
a3zgbL0760Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3zgbL2193Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a6zgbL0770Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zgbL2170Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
g6bgbL0754Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
g6bgbL2171Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
g7bgbL0747Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
g7bgbL2167Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
gbj1hR2879Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
gbj1hR2900Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
gbj1hR2950Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
gbj1hR2963Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
ceggbL0753Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceggbL2215Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Gbar_A03G010430Gbar_A03G010430_HAU-AD2_v2.0Gossypium barbadensegene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gbar_A03G010430.5.utr5p1Gbar_A03G010430.5.utr5p1_HAU-AD2_v2.0Gossypium barbadensefive_prime_UTR
Gbar_A03G010430.5.utr5p2Gbar_A03G010430.5.utr5p2_HAU-AD2_v2.0Gossypium barbadensefive_prime_UTR
Gbar_A03G010430.5.utr5p3Gbar_A03G010430.5.utr5p3_HAU-AD2_v2.0Gossypium barbadensefive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gbar_A03G010430.5.exon1Gbar_A03G010430.5.exon1_HAU-AD2_v2.0Gossypium barbadenseexon
Gbar_A03G010430.5.exon2Gbar_A03G010430.5.exon2_HAU-AD2_v2.0Gossypium barbadenseexon
Gbar_A03G010430.5.exon3Gbar_A03G010430.5.exon3_HAU-AD2_v2.0Gossypium barbadenseexon
Gbar_A03G010430.5.exon4Gbar_A03G010430.5.exon4_HAU-AD2_v2.0Gossypium barbadenseexon
Gbar_A03G010430.5.exon5Gbar_A03G010430.5.exon5_HAU-AD2_v2.0Gossypium barbadenseexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Gbar_A03G010430.5cds.Gbar_A03G010430.5_HAU-AD2_v2.0Gossypium barbadenseCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gbar_A03G010430.5.utr3p1Gbar_A03G010430.5.utr3p1_HAU-AD2_v2.0Gossypium barbadensethree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Gbar_A03G010430.5Gbar_A03G010430.5-protein_HAU-AD2_v2.0Gossypium barbadensepolypeptide
Gbar_A03G010430.5_HAU-AD2_v2.0Gbar_A03G010430.5_HAU-AD2_v2.0Gossypium barbadensepolypeptide


Homology
[Close]
BLAST of Gbar_A03G010430.5 vs. TAIR10
Match: AT2G46200.2 (| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:18974864-18976646 REVERSE LENGTH=382)

HSP 1 Score: 102.834 bits (255), Expect = 7.704e-27
Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:    2 MIKD--GSMDLSVSEF-LKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKD  GS++ +V +  ++YLE R++DL  QE+LSV+ AN+LMS LRA LEPFR+VVDE  P EEKSA   LT K+KKS RN LW+KRK++  AE+ AK
Sbjct:   61 MIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAK 159
[Close]
BLAST of Gbar_A03G010430.5 vs. TAIR10
Match: AT2G46200.1 (| Symbols: | unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). | chr2:18974864-18976646 REVERSE LENGTH=382)

HSP 1 Score: 102.834 bits (255), Expect = 7.704e-27
Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:    2 MIKD--GSMDLSVSEF-LKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKD  GS++ +V +  ++YLE R++DL  QE+LSV+ AN+LMS LRA LEPFR+VVDE  P EEKSA   LT K+KKS RN LW+KRK++  AE+ AK
Sbjct:   61 MIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAK 159
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|763742206|gb|KJB09705.1| (hypothetical protein B456_001G158000 [Gossypium raimondii])

HSP 1 Score: 256.144 bits (653), Expect = 2.202e-82
Identity = 130/138 (94.20%), Postives = 131/138 (94.93%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVFLGFSLIMNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR 139
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAKVVFLGFSL MNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAKVVFLGFSLSMNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR 197
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|1347696861|gb|PPR96729.1| (hypothetical protein GOBAR_AA23937 [Gossypium barbadense])

HSP 1 Score: 249.98 bits (637), Expect = 6.806e-82
Identity = 133/160 (83.12%), Postives = 135/160 (84.38%), Query Frame = 0 
Query:    1 MMIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVFLGFSL------------------------IMNNLIKLTEKLMSGELGRLPRTLRAARYLL 136
            MMIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVFLGFS+                        IMNNLIKLTEKLMSGELGRLPRTLRAAR+ L
Sbjct:   60 MMIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVFLGFSMKEIAKLKAKEEKKRLESELVMHVRIMNNLIKLTEKLMSGELGRLPRTLRAARFSL 219
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|823124828|ref|XP_012481678.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X3 [Gossypium raimondii])

HSP 1 Score: 174.866 bits (442), Expect = 4.129e-51
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:    1 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 96
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|763742207|gb|KJB09706.1| (hypothetical protein B456_001G158000 [Gossypium raimondii])

HSP 1 Score: 174.481 bits (441), Expect = 5.708e-51
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   26 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 121
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|763742208|gb|KJB09707.1| (hypothetical protein B456_001G158000 [Gossypium raimondii])

HSP 1 Score: 174.866 bits (442), Expect = 1.019e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|823124826|ref|XP_012481673.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Gossypium raimondii] >gi|763742205|gb|KJB09704.1| hypothetical protein B456_001G158000 [Gossypium raimondii])

HSP 1 Score: 174.866 bits (442), Expect = 1.490e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|1344107191|gb|PPD81045.1| (hypothetical protein GOBAR_DD22023 [Gossypium barbadense])

HSP 1 Score: 174.866 bits (442), Expect = 1.641e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|1029134908|ref|XP_016745593.1| (PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Gossypium hirsutum])

HSP 1 Score: 174.866 bits (442), Expect = 1.836e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   64 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 159
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|823124822|ref|XP_012481656.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Gossypium raimondii] >gi|823124824|ref|XP_012481665.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Gossypium raimondii])

HSP 1 Score: 174.481 bits (441), Expect = 2.066e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   64 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 159
[Close]
BLAST of Gbar_A03G010430.5 vs. NCBI nr
Match: gi|1050557457|ref|XP_017626836.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Gossypium arboreum] >gi|728849809|gb|KHG29252.1| Programmed cell death 7 [Gossypium arboreum])

HSP 1 Score: 172.17 bits (435), Expect = 1.509e-49
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFL+YLEDRRIDLETQELLS+E ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLRYLEDRRIDLETQELLSLEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A0D2QR62_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G158000 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.553e-82
Identity = 130/138 (94.20%), Postives = 131/138 (94.93%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVFLGFSLIMNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR 139
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAKVVFLGFSL MNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAKVVFLGFSLSMNNLIKLTEKLMSGELGRLPRTLRAARYLLCSR 197
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A0D2PZI4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G158000 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.026e-51
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   26 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 121
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A0D2LZ87_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G158000 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.188e-51
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A0D2PS52_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G158000 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.051e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A1U8P5K5_GOSHI (LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Gossypium hirsutum OX=3635 GN=LOC107954520 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.295e-50
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFLKYLEDRRIDLETQELLSVE ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   64 MIKDGSMDPSVSEFLKYLEDRRIDLETQELLSVEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 159
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A0B0PWM5_GOSAR (Programmed cell death 7 OS=Gossypium arboreum OX=29729 GN=F383_14122 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.064e-49
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKDGSMD SVSEFL+YLEDRRIDLETQELLS+E ANALMSKLRA LEPFRYV DEGIP EEKSAVA LTNKIKKSKRNNLWRKRK+KRIAELLAK
Sbjct:   60 MIKDGSMDPSVSEFLRYLEDRRIDLETQELLSLEAANALMSKLRAQLEPFRYVADEGIPWEEKSAVARLTNKIKKSKRNNLWRKRKRKRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A1R3KN70_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06373 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.632e-31
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIK+GS D SVSEFLKYLEDR IDLETQELLS E AN+LMSKLRA LEPFRYVVDE  P EEKSA A L NKI KSKRN LWRKRK++RIAELLAK
Sbjct:    1 MIKNGSTDPSVSEFLKYLEDRGIDLETQELLSTEAANSLMSKLRAQLEPFRYVVDEASPWEEKSATAQLANKINKSKRNKLWRKRKRRRIAELLAK 96
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A1R3KGU5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01650 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.431e-31
Identity = 77/96 (80.21%), Postives = 82/96 (85.42%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIK+GS D SVSEFLKYLEDR IDLETQELLS E AN+LMSKLRA LEPFRYV+DE  P EEKSA A L NKI KSKRN LWRKRK++RIAELLAK
Sbjct:   60 MIKNGSTDPSVSEFLKYLEDRGIDLETQELLSTEAANSLMSKLRAQLEPFRYVMDEASPWEEKSATAQLANKINKSKRNKLWRKRKRRRIAELLAK 155
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A061DUT9_THECC (Programmed cell death protein 7 isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_005244 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.684e-31
Identity = 75/96 (78.12%), Postives = 83/96 (86.46%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIK+GS D SVSEFLKYLEDRRIDL+TQE +S+E AN+LMSKLRA LEPFRYVVDE  P EEKSA A L NKI KSKRN LWRKRK+KRIAE+L+K
Sbjct:   10 MIKNGSTDPSVSEFLKYLEDRRIDLDTQESISMEAANSLMSKLRAQLEPFRYVVDEASPWEEKSAAARLANKINKSKRNKLWRKRKRKRIAEMLSK 105
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Match: A0A061DSY9_THECC (Programmed cell death protein 7 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_005244 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.251e-30
Identity = 75/96 (78.12%), Postives = 83/96 (86.46%), Query Frame = 0 
Query:    2 MIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIK+GS D SVSEFLKYLEDRRIDL+TQE +S+E AN+LMSKLRA LEPFRYVVDE  P EEKSA A L NKI KSKRN LWRKRK+KRIAE+L+K
Sbjct:   10 MIKNGSTDPSVSEFLKYLEDRRIDLDTQESISMEAANSLMSKLRAQLEPFRYVVDEASPWEEKSAAARLANKINKSKRNKLWRKRKRKRIAEMLSK 105
[Close]
BLAST of Gbar_A03G010430.5 vs. ExPASy Swiss-Prot
Match: U1159_ARATH (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP59 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.063e-25
Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:    2 MIKD--GSMDLSVSEF-LKYLEDRRIDLETQELLSVEEANALMSKLRALLEPFRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAK 97
            MIKD  GS++ +V +  ++YLE R++DL  QE+LSV+ AN+LMS LRA LEPFR+VVDE  P EEKSA   LT K+KKS RN LW+KRK++  AE+ AK
Sbjct:   61 MIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAK 159
The following BLAST results are available for this feature:
BLAST of Gbar_A03G010430.5 vs. TAIR10
Analysis Date: 2018-11-07 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs arabidopsis TAIR10)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G46200.27.704e-2758.59| Symbols: | unknown protein; Has 35333 Blast hit... [more]
AT2G46200.17.704e-2758.59| Symbols: | unknown protein; Has 2968 Blast hits... [more]
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BLAST of Gbar_A03G010430.5 vs. NCBI nr
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|763742206|gb|KJB09705.1|2.202e-8294.20hypothetical protein B456_001G158000 [Gossypium ra... [more]
gi|1347696861|gb|PPR96729.1|6.806e-8283.13hypothetical protein GOBAR_AA23937 [Gossypium barb... [more]
gi|823124828|ref|XP_012481678.1|4.129e-5192.71PREDICTED: U11/U12 small nuclear ribonucleoprotein... [more]
gi|763742207|gb|KJB09706.1|5.708e-5192.71hypothetical protein B456_001G158000 [Gossypium ra... [more]
gi|763742208|gb|KJB09707.1|1.019e-5092.71hypothetical protein B456_001G158000 [Gossypium ra... [more]
gi|823124826|ref|XP_012481673.1|1.490e-5092.71PREDICTED: U11/U12 small nuclear ribonucleoprotein... [more]
gi|1344107191|gb|PPD81045.1|1.641e-5092.71hypothetical protein GOBAR_DD22023 [Gossypium barb... [more]
gi|1029134908|ref|XP_016745593.1|1.836e-5092.71PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nucl... [more]
gi|823124822|ref|XP_012481656.1|2.066e-5092.71PREDICTED: U11/U12 small nuclear ribonucleoprotein... [more]
gi|1050557457|ref|XP_017626836.1|1.509e-4990.63PREDICTED: U11/U12 small nuclear ribonucleoprotein... [more]
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BLAST of Gbar_A03G010430.5 vs. ExPASy TrEMBL
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A0D2QR62_GOSRA1.553e-8294.20Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A0D2PZI4_GOSRA4.026e-5192.71Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A0D2LZ87_GOSRA7.188e-5192.71Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A0D2PS52_GOSRA1.051e-5092.71Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8P5K5_GOSHI1.295e-5092.71LOW QUALITY PROTEIN: U11/U12 small nuclear ribonuc... [more]
A0A0B0PWM5_GOSAR1.064e-4990.63Programmed cell death 7 OS=Gossypium arboreum OX=2... [more]
A0A1R3KN70_9ROSI2.632e-3181.25Uncharacterized protein OS=Corchorus olitorius OX=... [more]
A0A1R3KGU5_COCAP3.431e-3180.21Uncharacterized protein OS=Corchorus capsularis OX... [more]
A0A061DUT9_THECC9.684e-3178.13Programmed cell death protein 7 isoform 3 OS=Theob... [more]
A0A061DSY9_THECC1.251e-3078.13Programmed cell death protein 7 isoform 2 OS=Theob... [more]
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BLAST of Gbar_A03G010430.5 vs. ExPASy Swiss-Prot
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
U1159_ARATH1.063e-2558.59U11/U12 small nuclear ribonucleoprotein 59 kDa pro... [more]
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Gbar_A03G010430.5_HAU-AD2_v2.0 ID=Gbar_A03G010430.5_HAU-AD2_v2.0; Name=Gbar_A03G010430.5; organism=Gossypium barbadense; type=mRNA; length=1343bp
TGCTAGGGTTTGAAGTTAACAATTTTTCAAAAAGAAAAATATAAAGCAGC
AATGAATCCGGTTCACTTCCAACCCGCGCCGCCTCCACCTTGGTTCCCAA
TGTTACTTCCGGAACCTCCGAATTCGAGTACATTTTTGGAGACCAGAAAT
GTGCGTGATCCCTTAGAGAATTGCAAGATACCCTCAATCTTGCCAACGCC
GTGCAAAAGGAGTTGGAAATACTGATGATGATAAAAGATGGGTCGATGGA
CCTTTCTGTTTCTGAGTTCTTGAAGTATCTAGAAGATAGGAGGATTGATT
TAGAAACTCAAGAGCTACTGTCTGTGGAAGAGGCGAATGCATTGATGTCA
AAGCTAAGAGCTCTGTTAGAGCCCTTTAGATATGTTGTAGATGAAGGGAT
CCCGCGGGAGGAGAAATCAGCAGTAGCTAGTCTGACCAATAAAATCAAGA
AGTCTAAAAGGAATAACCTTTGGAGGAAAAGAAAACAAAAACGAATTGCA
GAATTGCTTGCAAAGGTTGTTTTTCTTGGTTTCTCATTGATCATGAACAA
TTTGATCAAGCTGACTGAGAAGCTGATGAGTGGAGAGCTAGGGAGATTGC
CAAGGACATTGCGAGCCGCAAGGTACTTGTTGTGTTCTAGGTTGAATAGA
TGAAGGAAATAGCAAAGCTTAAAGCCAAGGAAGAAAAAAAAAGACTGGAA
TCTGAGGTAAAGGATTTGAAAAACGACAAGTTTCTTTCATCTATGCTGTT
AGTTTATACTTATATTGTCGACTTTACAATTTGGTGGCAACATAACAGTT
TGATTGTAAAATTTCTAATGCTATACCAATATTTCTAACAGATACCAAAG
TTTTTAAAGGAAGATGTTAGATATTTTGGTATCCATTAAAAATTTTGGTA
TTTGGTTAGAAATTTTGGTATAATCCATTGATATCTATGCACAAGCATGA
AAATGAACTTTTGATATGTCAAAATATCTAACATCTTCCATTAAAAATTT
AGGTATCCCTTACAAATTTTGGTTCCCGTTAGAAGTTTGGTATCTATTTG
AAATTCTCGTATCCATTAGAAATTTTGTTATTTTGTTACCAATTTTTGTA
TCCATTAGAACTTCGGTACACTCTATTGGTCCCCAATTCGTGTAACGTGA
TACCAAAAATTCATGTTCTTCACTCTTTAAAACTCCGATCTAACAAATTC
AAATCTTTCACTGAAAAATTCAATATTTACAAATTTATTTAAAAAATTTT
AAAGAACAATTTTTTTTTTCAAATCCTTTTAATTTTTCCTTAAGATTTCA
TCTTTTTTCTATTCTCATAAAAATATATAAATTTTTAGAACAA
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protein sequence of Gbar_A03G010430.5_HAU-AD2_v2.0

>Gbar_A03G010430.5_HAU-AD2_v2.0 ID=Gbar_A03G010430.5_HAU-AD2_v2.0; Name=Gbar_A03G010430.5_HAU-AD2_v2.0; organism=Gossypium barbadense; type=polypeptide; length=142bp
MMIKDGSMDLSVSEFLKYLEDRRIDLETQELLSVEEANALMSKLRALLEP
FRYVVDEGIPREEKSAVASLTNKIKKSKRNNLWRKRKQKRIAELLAKVVF
LGFSLIMNNLIKLTEKLMSGELGRLPRTLRAARYLLCSRLNR
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mRNA from alignment at Gbar_A03:44288194..44289933+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gbar_A03G010430.5_HAU-AD2_v2.0 ID=Gbar_A03G010430.5_HAU-AD2_v2.0; Name=Gbar_A03G010430.5; organism=Gossypium barbadense; type=mRNA; length=1740bp; location=Sequence derived from: Gbar_A03:44288194..44289933+ (Gossypium barbadense
TGCTAGGGTTTGAAGTTAACAATTTTTCAAAAAGAAAAATATAAAGCAGG
TACGAGTTTTGATATTCTTTCTGTTTTATTGTTTTCCTTATACGAACCCA
TCTCTAATTTTTTAATTCATATTTAGCAATGAATCCGGTTCACTTCCAAC
CCGCGCCGCCTCCACCTTGGTTCCCAATGTTACTTCCGGAACCTCCGAAT
TCGAGTACATTTTTGGAGACCAGAAATGTGCGTGATCCCTTAGAGAATTG
CAAGATACCCTCAATCTTGCCAACGCCGTGTATGTTAGTTTTGTTTTCTT
ATATAGTTCGCTAATATCAACTATAAGTGCCGTATGCTTTTGAATTTCCT
TTTAACTGCAAGTAAAATCGATTGGTTCCTTAGGCAAAAGGAGTTGGAAA
TACTGATGATGATAAAAGATGGGTCGATGGACCTTTCTGTTTCTGAGTTC
TTGAAGTATCTAGAAGATAGGAGGATTGATTTAGAAACTCAAGAGCTACT
GTCTGTGGAAGAGGCGAATGCATTGATGTCAAAGCTAAGAGCTCTGTTAG
AGCCCTTTAGATATGTTGTAGATGAAGGGATCCCGCGGGAGGAGAAATCA
GCAGTAGCTAGTCTGACCAATAAAATCAAGAAGTCTAAAAGGAATAACCT
TTGGAGGAAAAGAAAACAAAAACGAATTGCAGAATTGCTTGCAAAGGTTG
TTTTTCTTGGTTTCTCATTGTAAGCTTTCTCCTTATCTTTCTTTTTTTCC
CCTATTGGCCTATGTGGGAAATAGCTAATATTTTCAGCTTGTTATGCATG
TTAGGATCATGAACAATTTGATCAAGCTGACTGAGAAGCTGATGAGTGGA
GAGCTAGGGAGATTGCCAAGGACATTGCGAGCCGCAAGGTACTTGTTGTG
TTCTAGGTGGGTTTTCTTGCTATGAACATACTGACAGATTTTCGTTGATT
CTTCCATTAGATGCCAAGAATTCAAAAGTCCTTTTTTCTCTTGTTTTTGT
AAGCTCACTTGGTAATGACTACTAAGTTGATTTGCAGGTTGAATAGATGA
AGGAAATAGCAAAGCTTAAAGCCAAGGAAGAAAAAAAAAGACTGGAATCT
GAGGTAAAGGATTTGAAAAACGACAAGTTTCTTTCATCTATGCTGTTAGT
TTATACTTATATTGTCGACTTTACAATTTGGTGGCAACATAACAGTTTGA
TTGTAAAATTTCTAATGCTATACCAATATTTCTAACAGATACCAAAGTTT
TTAAAGGAAGATGTTAGATATTTTGGTATCCATTAAAAATTTTGGTATTT
GGTTAGAAATTTTGGTATAATCCATTGATATCTATGCACAAGCATGAAAA
TGAACTTTTGATATGTCAAAATATCTAACATCTTCCATTAAAAATTTAGG
TATCCCTTACAAATTTTGGTTCCCGTTAGAAGTTTGGTATCTATTTGAAA
TTCTCGTATCCATTAGAAATTTTGTTATTTTGTTACCAATTTTTGTATCC
ATTAGAACTTCGGTACACTCTATTGGTCCCCAATTCGTGTAACGTGATAC
CAAAAATTCATGTTCTTCACTCTTTAAAACTCCGATCTAACAAATTCAAA
TCTTTCACTGAAAAATTCAATATTTACAAATTTATTTAAAAAATTTTAAA
GAACAATTTTTTTTTTCAAATCCTTTTAATTTTTCCTTAAGATTTCATCT
TTTTTCTATTCTCATAAAAATATATAAATTTTTAGAACAA
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Coding sequence (CDS) from alignment at Gbar_A03:44288194..44289933+

>Gbar_A03G010430.5_HAU-AD2_v2.0 ID=Gbar_A03G010430.5_HAU-AD2_v2.0; Name=Gbar_A03G010430.5; organism=Gossypium barbadense; type=CDS; length=429bp; location=Sequence derived from: Gbar_A03:44288194..44289933+ (Gossypium barbadense
ATGATGATAAAAGATGGGTCGATGGACCTTTCTGTTTCTGAGTTCTTGAA
GTATCTAGAAGATAGGAGGATTGATTTAGAAACTCAAGAGCTACTGTCTG
TGGAAGAGGCGAATGCATTGATGTCAAAGCTAAGAGCTCTGTTAGAGCCC
TTTAGATATGTTGTAGATGAAGGGATCCCGCGGGAGGAGAAATCAGCAGT
AGCTAGTCTGACCAATAAAATCAAGAAGTCTAAAAGGAATAACCTTTGGA
GGAAAAGAAAACAAAAACGAATTGCAGAATTGCTTGCAAAGGTTGTTTTT
CTTGGTTTCTCATTGATCATGAACAATTTGATCAAGCTGACTGAGAAGCT
GATGAGTGGAGAGCTAGGGAGATTGCCAAGGACATTGCGAGCCGCAAGGT
ACTTGTTGTGTTCTAGGTTGAATAGATGA
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