Gbar_D11G028410.1, Gbar_D11G028410.1 (mRNA) Gossypium barbadense
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT3G14870.3 (| Symbols: | Plant protein of unknown function (DUF641) | chr3:5004040-5005586 FORWARD LENGTH=472) HSP 1 Score: 83.1889 bits (204), Expect = 8.738e-19 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+D + I+P ++ ++ HKCFA E +V K MLE F P F D + F L S P+ +LA P+S LA+F RTKYL L+ KME +FF L
Sbjct: 256 IDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAMFFERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQAFFGHL 360
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT3G14870.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr3:5004159-5005586 FORWARD LENGTH=475) HSP 1 Score: 83.1889 bits (204), Expect = 8.791e-19 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+D + I+P ++ ++ HKCFA E +V K MLE F P F D + F L S P+ +LA P+S LA+F RTKYL L+ KME +FF L
Sbjct: 259 IDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAMFFERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQAFFGHL 363
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT3G14870.2 (| Symbols: | Plant protein of unknown function (DUF641) | chr3:5004171-5005586 FORWARD LENGTH=471) HSP 1 Score: 83.1889 bits (204), Expect = 9.064e-19 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+D + I+P ++ ++ HKCFA E +V K MLE F P F D + F L S P+ +LA P+S LA+F RTKYL L+ KME +FF L
Sbjct: 255 IDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAMFFERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQAFFGHL 359
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT1G53380.3 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453) HSP 1 Score: 76.2554 bits (186), Expect = 2.321e-16 Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNF------RVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+ + +I PG + ++ HKCF FE FV M E F P F R K D E + FK L S K +L P+S ARF R KYL L+ KME +FF L
Sbjct: 240 ISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKKKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHL 350
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT1G53380.2 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453) HSP 1 Score: 76.2554 bits (186), Expect = 2.321e-16 Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNF------RVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+ + +I PG + ++ HKCF FE FV M E F P F R K D E + FK L S K +L P+S ARF R KYL L+ KME +FF L
Sbjct: 240 ISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKKKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHL 350
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT1G53380.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453) HSP 1 Score: 76.2554 bits (186), Expect = 2.321e-16 Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNF------RVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWEL 133
+ + +I PG + ++ HKCF FE FV M E F P F R K D E + FK L S K +L P+S ARF R KYL L+ KME +FF L
Sbjct: 240 ISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKKKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHL 350
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT2G45260.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr2:18664661-18665938 REVERSE LENGTH=425) HSP 1 Score: 74.7146 bits (182), Expect = 6.611e-16 Identity = 43/125 (34.40%), Postives = 62/125 (49.60%), Query Frame = 0
Query: 14 FPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKIL--DLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPK 136
F P + + LD+ +IEP ++A+ HK +AFES++ + M GF NF V +S + D + + F L+ P L NP S F R+KYL LV KME SFF L+ +
Sbjct: 201 FSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTFFRQFLALKDMDPLDALGTNPDSNFGIFCRSKYLLLVHPKMEASFFGNLDQR 325
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT1G29300.1 (| Symbols: UNE1 | Plant protein of unknown function (DUF641) | chr1:10248120-10249499 REVERSE LENGTH=459) HSP 1 Score: 74.3294 bits (181), Expect = 8.849e-16 Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 0
Query: 39 GAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
+FAR SH+CFAFESFV M E F +P+F ++ F+ L S P +L +NP S ARF KYL++V AKME SFF L +K
Sbjct: 273 STVFARPSHRCFAFESFVCGKMFENFGAPDFSRREE--------------FEKLRSVDPIQYLTRNPGSSFARFVVHKYLSVVHAKMECSFFGNLNQRK 357
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT4G34080.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr4:16326985-16327797 FORWARD LENGTH=270) HSP 1 Score: 55.8398 bits (133), Expect = 1.621e-9 Identity = 32/105 (30.48%), Postives = 48/105 (45.71%), Query Frame = 0
Query: 14 FPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKIL--DLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTK 116
F P + + LD +IEP ++A+ HK +AFES++ + M GF NF V +S + D + + F L+ P L NP S F R+K
Sbjct: 166 FSKPLINMMKAAGWDLDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALGTNPDSNFGIFCRSK 270
BLAST of Gbar_D11G028410.1 vs. TAIR10
Match: AT4G33320.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr4:16057038-16057916 REVERSE LENGTH=292) HSP 1 Score: 52.373 bits (124), Expect = 2.312e-8 Identity = 31/110 (28.18%), Postives = 50/110 (45.45%), Query Frame = 0
Query: 14 FPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKIL--DLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLV 121
F P + + LD+ +IEP ++A+ HK +AFES++ + M GF NF V +S + D + + F L+ P L NP S + + K +V
Sbjct: 178 FSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALGTNPDSNVRLYACQKVFVIV 287
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1344107047|gb|PPD80917.1| (hypothetical protein GOBAR_DD22151 [Gossypium barbadense]) HSP 1 Score: 379.022 bits (972), Expect = 6.506e-132 Identity = 189/231 (81.82%), Postives = 189/231 (81.82%), Query Frame = 0
Query: 1 MATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKKASYLR------------------------------------------QSMGDELVVEDGRVCFDFDEVNGYGGNLDDNDAAEGVGHRGVDVVEA 189
MATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKKASYLR QSMGDELVVEDGRVCFDFDEVNGYGGNLDDNDAAEGVGHRGVDVVEA
Sbjct: 25 MATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKKASYLRWVKKDYSFLEIYMENVIGDSFLSGKINNGNVNVRVNFTVVPSQSMGDELVVEDGRVCFDFDEVNGYGGNLDDNDAAEGVGHRGVDVVEA 255
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1028945900|ref|XP_016716244.1| (PREDICTED: uncharacterized protein LOC107929361 [Gossypium hirsutum]) HSP 1 Score: 204.912 bits (520), Expect = 3.204e-63 Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 0
Query: 2 ATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKKASYLRQSMG----DELVVEDGRVCFDFDEVNGYGGNLDDNDAAEG-VGHRGVDV 186
T PRHR LHG+ PPPH DHQGS+ HLDA+ KTIEPG IFARESHKCFAFESFV KT LEGFDSP+F KDSD K LD +Q+ +TFKTL+S HPKSFLAQNP S LARFTRTKYLNLV AKME SFF L + +L +G +++ + + + F E+ Y N+ + G + VDV
Sbjct: 27 TTLPRHRLLHGQRPPPHRDHQGSYHSHLDASAKTIEPGVIFARESHKCFAFESFVCKTTLEGFDSPDFEATKDSDSKRLDPKQHFNTFKTLKSVHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFRNLTISRRFWLLHCLGISMHEQVSIFQVKKDYSFSEI--YMENVTEESLLLGEINDGNVDV 214
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1029048793|ref|XP_016688084.1| (PREDICTED: uncharacterized protein LOC107905828 [Gossypium hirsutum]) HSP 1 Score: 172.17 bits (435), Expect = 4.115e-48 Identity = 86/109 (78.90%), Postives = 93/109 (85.32%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+SAHPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSAHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1344094913|gb|PPD70290.1| (hypothetical protein GOBAR_DD32834 [Gossypium barbadense]) HSP 1 Score: 172.17 bits (435), Expect = 4.673e-48 Identity = 86/109 (78.90%), Postives = 93/109 (85.32%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+SAHPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSAHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1050612333|ref|XP_017628870.1| (PREDICTED: uncharacterized protein LOC108471818 [Gossypium arboreum]) HSP 1 Score: 165.622 bits (418), Expect = 9.039e-48 Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 0
Query: 18 HYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
H+D +GSH HLD KTI+P AIFARESHKCFAFESFV KT+L+GFDSP+F VAKDS+ K LD EQ+ +TFKTL+SAHPKSFLAQN S L RFT+TKYLNLV AK+E SFF L K
Sbjct: 13 HHDRRGSHDSHLDVAAKTIKPEAIFARESHKCFAFESFVCKTILKGFDSPDFGVAKDSNSKRLDPEQHFNTFKTLKSAHPKSFLAQNLSSSLVRFTKTKYLNLVYAKIECSFFRNLNQSK 132
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1050568486|ref|XP_017604948.1| (PREDICTED: uncharacterized protein LOC108451781 [Gossypium arboreum]) HSP 1 Score: 170.629 bits (431), Expect = 1.700e-47 Identity = 85/109 (77.98%), Postives = 92/109 (84.40%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+S HPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSVHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1028995072|ref|XP_016752281.1| (PREDICTED: uncharacterized protein LOC107960444 [Gossypium hirsutum]) HSP 1 Score: 170.629 bits (431), Expect = 1.890e-47 Identity = 85/109 (77.98%), Postives = 92/109 (84.40%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+S HPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSVHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|823222182|ref|XP_012443797.1| (PREDICTED: uncharacterized protein LOC105768431 [Gossypium raimondii] >gi|763790385|gb|KJB57381.1| hypothetical protein B456_009G160300 [Gossypium raimondii]) HSP 1 Score: 170.244 bits (430), Expect = 1.951e-47 Identity = 85/109 (77.98%), Postives = 93/109 (85.32%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAK+SD K LD EQ+ +TFKTL+SAHPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKESDSKRLDPEQHFNTFKTLKSAHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|823155665|ref|XP_012477768.1| (PREDICTED: uncharacterized protein LOC105793401 [Gossypium raimondii]) HSP 1 Score: 145.206 bits (365), Expect = 3.992e-40 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 0
Query: 2 ATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLES 94
T PRHR LHG+ PPPH DHQGS+ HLDA+ KTIEPGAIFARESHKCFAFESFV KTMLEGFDSP+F KDSD K LD +Q+ +TFKTL+S
Sbjct: 27 TTLPRHRLLHGQRPPPHLDHQGSYHSHLDASAKTIEPGAIFARESHKCFAFESFVCKTMLEGFDSPDFGATKDSDSKRLDPKQHFNTFKTLKS 119
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Match: gi|1269930326|ref|XP_022777298.1| (protein GRAVITROPIC IN THE LIGHT 1-like [Durio zibethinus]) HSP 1 Score: 145.591 bits (366), Expect = 5.838e-38 Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FA++SH+CF FESFV KTMLEGFDS +F + KDS K LD EQY + FK L+SA PKSFL QNP S A+FTRTKYL LV AKME SFF L +K
Sbjct: 256 LDAAAKTIEPGAVFAKQSHRCFVFESFVCKTMLEGFDSRDFGLTKDSSSKKLDPEQYFNRFKNLKSALPKSFLIQNPNSSFAKFTRTKYLKLVHAKMECSFFGNLSQRK 364
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1U8LSP9_GOSHI (uncharacterized protein LOC107929361 OS=Gossypium hirsutum OX=3635 GN=LOC107929361 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.260e-63 Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 0
Query: 2 ATFPRHRCLHGKFPPPHYDHQGSHPIHLDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKKASYLRQSMG----DELVVEDGRVCFDFDEVNGYGGNLDDNDAAEG-VGHRGVDV 186
T PRHR LHG+ PPPH DHQGS+ HLDA+ KTIEPG IFARESHKCFAFESFV KT LEGFDSP+F KDSD K LD +Q+ +TFKTL+S HPKSFLAQNP S LARFTRTKYLNLV AKME SFF L + +L +G +++ + + + F E+ Y N+ + G + VDV
Sbjct: 27 TTLPRHRLLHGQRPPPHRDHQGSYHSHLDASAKTIEPGVIFARESHKCFAFESFVCKTTLEGFDSPDFEATKDSDSKRLDPKQHFNTFKTLKSVHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFRNLTISRRFWLLHCLGISMHEQVSIFQVKKDYSFSEI--YMENVTEESLLLGEINDGNVDV 214
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1U8JID9_GOSHI (uncharacterized protein LOC107905828 OS=Gossypium hirsutum OX=3635 GN=LOC107905828 PE=4 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.903e-48 Identity = 86/109 (78.90%), Postives = 93/109 (85.32%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+SAHPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSAHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1U8PM60_GOSHI (uncharacterized protein LOC107960444 OS=Gossypium hirsutum OX=3635 GN=LOC107960444 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.333e-47 Identity = 85/109 (77.98%), Postives = 92/109 (84.40%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAKDSD K LD EQ+ +TFKTL+S HPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKDSDSKRLDPEQHFNTFKTLKSVHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A0D2TR28_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G160300 PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.376e-47 Identity = 85/109 (77.98%), Postives = 93/109 (85.32%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FARESHKCFAFESFV +TMLEGFDSP+F VAK+SD K LD EQ+ +TFKTL+SAHPKSFLAQNP S LARFTRTKYLNLV AKME SFF L +K
Sbjct: 251 LDAAAKTIEPGAVFARESHKCFAFESFVCRTMLEGFDSPDFGVAKESDSKRLDPEQHFNTFKTLKSAHPKSFLAQNPSSSLARFTRTKYLNLVHAKMECSFFGNLNQRK 359
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1R3I0Q6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15873 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.465e-34 Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LD+ K IEPGA+FA++SH+ F FESFV KTMLEGFDSP+F ++KDS K L+ E + + FKTL+SA PK FL QNP S A+FTRTKY NLV AKME SFF L +K
Sbjct: 253 LDSAAKAIEPGAVFAKQSHRSFVFESFVCKTMLEGFDSPDFGLSKDSVPKKLETEHHFNKFKTLKSALPKPFLLQNPNSSFAKFTRTKYFNLVHAKMECSFFGNLNQRK 361
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A061GET1_THECC (Intracellular protein transport protein USO1, putative OS=Theobroma cacao OX=3641 GN=TCM_029641 PE=4 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.428e-34 Identity = 68/109 (62.39%), Postives = 82/109 (75.23%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LDA KTIEPGA+FA++SH+CF FESFV KTML+GF+S +F + +S K LD EQY + FK L+SA+PKS+L Q P S A FTRTKYLNLV AKME SFF L +K
Sbjct: 257 LDAAAKTIEPGAVFAKQSHRCFVFESFVCKTMLDGFNSHDFGLTNNSASKKLDPEQYFNKFKNLKSANPKSYLVQYPNSSFAIFTRTKYLNLVHAKMECSFFGNLNQRK 365
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1R3H4Z4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31225 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.190e-34 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
LD+ K IEPGA+FA++S++ F FESFV KTMLEGFDSP+F ++KDS K L+ E + + FKTL+SA PK FL QNP S A+FTRTKY NLV AKME SFF L +K
Sbjct: 254 LDSAAKAIEPGAVFAKQSYRSFVFESFVCKTMLEGFDSPDFGLSKDSVSKKLETEHHFNKFKTLKSALPKPFLLQNPNSSFAKFTRTKYFNLVHAKMECSFFGNLNQRK 362
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1U8JR48_GOSHI (uncharacterized protein LOC107909639 OS=Gossypium hirsutum OX=3635 GN=LOC107909639 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.122e-30 Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 0
Query: 31 ATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
A TK IEP A+ A++SH CF FESFV KTML+GFDS +F S LK L EQY + FKTL+SA+PKSFL QNP+S A+F R KYL LV +KME SFF L +K
Sbjct: 233 AATKAIEPSAMLAKQSHACFLFESFVCKTMLQGFDSHDF-----SGLKSLHREQYFNAFKTLKSANPKSFLVQNPKSGFAKFIRDKYLKLVHSKMECSFFGNLNQRK 334
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A0D2ULU5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G036900 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.732e-29 Identity = 64/107 (59.81%), Postives = 75/107 (70.09%), Query Frame = 0
Query: 31 ATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
A TK IEP A+ A++SH CF FESFV KTML+GFDS +F S LK L EQY + FKTL+SA+PKSFL QNP+S A+F R KYL LV KME SFF L +K
Sbjct: 230 AATKAIEPSAMLAKQSHACFLFESFVCKTMLQGFDSHDF-----SGLKSLHREQYFNAFKTLKSANPKSFLVQNPKSGFAKFIRDKYLKLVHPKMECSFFGNLNQRK 331
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Match: A0A1U8L8W5_GOSHI (uncharacterized protein LOC107924978 OS=Gossypium hirsutum OX=3635 GN=LOC107924978 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.789e-29 Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 0
Query: 29 LDATTKTIEPGAIFARESHKCFAFESFVFKTMLEGFDSPNFRVAKDSDLKILDLEQYLSTFKTLESAHPKSFLAQNPRSFLARFTRTKYLNLVQAKMEYSFFWELEPKK 137
+ A TK IEP A+ A++SH CF FESFV KTML+GFDS +F S LK L EQY + FKTL+SA+PKSFL QNP+S A+F R KYL LV KME SFF L +K
Sbjct: 231 IAAATKAIEPSAMLAKQSHACFLFESFVCKTMLQGFDSHDF-----SCLKSLHREQYFNAFKTLKSANPKSFLVQNPKSGFAKFIRDKYLKLVHPKMECSFFGNLNQRK 334 The following BLAST results are available for this feature:
BLAST of Gbar_D11G028410.1 vs. TAIR10
Analysis Date: 2018-11-07 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs arabidopsis TAIR10) Total hits: 10
BLAST of Gbar_D11G028410.1 vs. NCBI nr
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs NCBI nr) Total hits: 10
BLAST of Gbar_D11G028410.1 vs. ExPASy TrEMBL
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Gbar_D11G028410.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-11-09 (BLASTP of HAU v2.0 Gossypium barbadense proteins vs UniProt Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for HAU v2.0 Gossypium barbadense proteins
Date Performed: 2018-11-07
Sequences
The
following sequences are available for this feature:
mRNA sequence >Gbar_D11G028410.1_HAU-AD2_v2.0 ID=Gbar_D11G028410.1_HAU-AD2_v2.0; Name=Gbar_D11G028410.1; organism=Gossypium barbadense; type=mRNA; length=570bpback to top protein sequence of Gbar_D11G028410.1_HAU-AD2_v2.0 >Gbar_D11G028410.1_HAU-AD2_v2.0 ID=Gbar_D11G028410.1_HAU-AD2_v2.0; Name=Gbar_D11G028410.1_HAU-AD2_v2.0; organism=Gossypium barbadense; type=polypeptide; length=189bpback to top mRNA from alignment at Gbar_D11:57625968..57626834+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Gbar_D11G028410.1_HAU-AD2_v2.0 ID=Gbar_D11G028410.1_HAU-AD2_v2.0; Name=Gbar_D11G028410.1; organism=Gossypium barbadense; type=mRNA; length=867bp; location=Sequence derived from: Gbar_D11:57625968..57626834+ (Gossypium barbadenseback to top Coding sequence (CDS) from alignment at Gbar_D11:57625968..57626834+ >Gbar_D11G028410.1_HAU-AD2_v2.0 ID=Gbar_D11G028410.1_HAU-AD2_v2.0; Name=Gbar_D11G028410.1; organism=Gossypium barbadense; type=CDS; length=570bp; location=Sequence derived from: Gbar_D11:57625968..57626834+ (Gossypium barbadenseback to top |