Gohir.D01G135900.1, Tx_JGIv1.1_Gohir.D01G135900.1.v1.1 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Gohir.D01G135900.1 vs. ExPASy Swiss-Prot
Match: XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 1.241e-8 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 617 RVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
++ + ++YPFA +KP G+ G MTL DIN++I PP +P H P V SGK VV TKI T+
Sbjct: 221 KLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVVGKTKIRTE 287
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A2P5RR94_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD13739 PE=4 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A0D2NNY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G170200 PE=4 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A0D2Q7F5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G170200 PE=4 SV=1) HSP 1 Score: 502.671 bits (1293), Expect = 1.183e-178 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A1U8MF21_GOSHI (uncharacterized protein LOC107937129 isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107937129 PE=4 SV=1) HSP 1 Score: 499.59 bits (1285), Expect = 2.100e-177 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A1U8MIM9_GOSHI (uncharacterized protein LOC107937129 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107937129 PE=4 SV=1) HSP 1 Score: 499.59 bits (1285), Expect = 3.048e-177 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A2P5XJY6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17035 PE=4 SV=1) HSP 1 Score: 497.278 bits (1279), Expect = 1.781e-176 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKMKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A1U8MF17_GOSHI (uncharacterized protein LOC107937129 isoform X4 OS=Gossypium hirsutum OX=3635 GN=LOC107937129 PE=4 SV=1) HSP 1 Score: 492.271 bits (1266), Expect = 1.504e-174 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A1U8MIQ0_GOSHI (uncharacterized protein LOC107937129 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107937129 PE=4 SV=1) HSP 1 Score: 492.656 bits (1267), Expect = 1.792e-174 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A061EA44_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011176 PE=4 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 3.539e-149 Identity = 229/267 (85.77%), Postives = 236/267 (88.39%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQIS------SGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGEL+SMAY SSSLHSPSLGWDLQNLGVLNADMSLVMDG TAPFFPHLDSDFSSGYLEDALLEF+E SKRRRLLL DH+Q N LNDLA + YWN SCNWGLSENFSCMSQ+TSINGVSDEP+STSVSSEEANIVTEIKTPEEAI SPE A DSSSSSYK S FFNKDTQ S SGS D+ KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELHSMAYASSSLHSPSLGWDLQNLGVLNADMSLVMDG--TAPFFPHLDSDFSSGYLEDALLEFSERSKRRRLLLCGDHDQTNDLNDLA-KSYWNSSCNWGLSENFSCMSQITSINGVSDEPVSTSVSSEEANIVTEIKTPEEAISGSPE-ALDSSSSSYKGSVKTKS-FFNKDTQFSTDPISSSGSNDRKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 262
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Match: A0A1R3HQP6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_27553 PE=4 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 1.809e-117 Identity = 185/256 (72.27%), Postives = 203/256 (79.30%), Query Frame = 2
Query: 110 GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDS-DFSSGYLEDALLEFTEPSKRRRLLLYN---------DHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANI--VTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGS--EDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
GWDLQNLGVLNADMSLVMD +G+A FFPHLDS DFSSGYLEDALLEFTE SKRRRLLLY+ +++ NG NDL + YWN +CNWGLSENFSCMS LT+IN +SDEPMS SVSS EAN V+EIKTPEE I E+ S + + + + F+ D SSGS +DK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 16 GWDLQNLGVLNADMSLVMD-NGSAQFFPHLDSADFSSGYLEDALLEFTERSKRRRLLLYSDDLDHHHDHEYSNINGFNDLLAKSYWNSNCNWGLSENFSCMSHLTNINAISDEPMSASVSSGEANNINVSEIKTPEEVISAGSHESSSSVKTKSFFNKNNNITHFSTDPISSSGSTEDDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 270
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|12846 (AT2G01990.2 | XRI1-like protein | Chr2:465197-466748 REVERSE LENGTH=244 | 201606) HSP 1 Score: 172.555 bits (436), Expect = 2.133e-52 Identity = 113/249 (45.38%), Postives = 145/249 (58.23%), Query Frame = 2
Query: 113 WDLQNLGVL-----NADMSLVMDGSGTAPF-FPHLD-SDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCM-SQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
WD+ NLG L N D M+ S F P +D SD S+GYLEDAL+E E SKRRRLL + FN +D + +WGL E++SC+ SQ + + + E +S VS + I ++P+ ++ ++D T+ SS + KR+IT++VYPF LVKPGG E D+TLNDINERILM P+RP+RHPVGDFA RPCVS GPGLSGKAVVALTKI TQ
Sbjct: 11 WDIHNLGSLFKPDFNLDTCGFMNRSPEHIFGSPEIDYSDVSTGYLEDALIESGERSKRRRLLFEDPSKSFN--DDDSQN-------DWGLHESYSCLNSQFVTPHVNTGERIS-GVSYCQETISNVYESPDTSV------SYDKIYVRE-----------KSPTEPSSSNCGNKNKRLITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQ 232
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|2787 (AT1G14630.1 | XRI1-like protein | Chr1:5019995-5021445 FORWARD LENGTH=226 | 201606) HSP 1 Score: 168.318 bits (425), Expect = 6.070e-51 Identity = 110/249 (44.18%), Postives = 135/249 (54.22%), Query Frame = 2
Query: 113 WDLQNLGVL-----NADMSLVMDGSGTAPFF-PHLD-SDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVS--SEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHT 832
WDL NLG L N D ++D S F P ++ D S+GYLEDAL+EF+ SKRRRL FNG D + +WGLSEN+SC S +DE ++S++ SEE + ++ + E + S + +D RVVYPF +VKPGG E D+TLNDIN+RILMP RPVRHPVGDFACRPCVSADGPGLSGKAVVA TKI T
Sbjct: 11 WDLHNLGSLFNQNFNLDAWGLIDESPENIFCSPEMEIGDVSTGYLEDALIEFSGRSKRRRL-------SFNGAEDKPDNDLDHSQNHWGLSENYSCTSSQ-----FADESPNSSINICSEEKSSISSRNSFEPSSSTSKKNDYDEK----------------------------------KRVVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQT 213
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|12845 (AT2G01990.1 | XRI1-like protein | Chr2:465197-466497 REVERSE LENGTH=213 | 201606) HSP 1 Score: 165.622 bits (418), Expect = 4.510e-50 Identity = 103/217 (47.47%), Postives = 133/217 (61.29%), Query Frame = 2
Query: 191 PHLD-SDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCM-SQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
P +D SD S+GYLEDAL+E E SKRRRLL + FN +D + +WGL E++SC+ SQ + + + E +S VS + I ++P+ ++ ++D K T+ SS + KR+IT++VYPF LVKPGG E D+TLNDINERILM P+RP+RHPVGDFA RPCVS GPGLSGKAVVALTKI TQ
Sbjct: 12 PEIDYSDVSTGYLEDALIESGERSKRRRLLFEDPSKSFN--DDDSQN-------DWGLHESYSCLNSQFVTPHVNTGERIS-GVSYCQETISNVYESPDTSV------SYDKIYVREKSP-----------TEPSSSNCGNKNKRLITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQ 201
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|2788 (AT1G14630.2 | XRI1-like protein | Chr1:5019995-5021016 FORWARD LENGTH=166 | 201606) HSP 1 Score: 61.2326 bits (147), Expect = 3.941e-11 Identity = 50/121 (41.32%), Postives = 62/121 (51.24%), Query Frame = 2
Query: 113 WDLQNLGVL-----NADMSLVMDGSGTAPFF-PHLD-SDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQL-------TSINGVSDEPMSTS 433
WDL NLG L N D ++D S F P ++ D S+GYLEDAL+EF+ SKRRRL FNG D + +WGLSEN+SC S +SIN S+E S S
Sbjct: 11 WDLHNLGSLFNQNFNLDAWGLIDESPENIFCSPEMEIGDVSTGYLEDALIEFSGRSKRRRL-------SFNGAEDKPDNDLDHSQNHWGLSENYSCTSSQFADESPNSSINICSEEKSSIS 124
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|44572 (AT5G48720.4 | x-ray induced transcript 1 | Chr5:19759233-19761621 FORWARD LENGTH=300 | 201606) HSP 1 Score: 58.9214 bits (141), Expect = 1.289e-9 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 617 RVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
++ + ++YPFA +KP G+ G MTL DIN++I PP +P H P V SGK VV TKI T+
Sbjct: 221 KLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVVGKTKIRTE 287
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|44570 (AT5G48720.2 | x-ray induced transcript 1 | Chr5:19759233-19761621 FORWARD LENGTH=300 | 201606) HSP 1 Score: 58.9214 bits (141), Expect = 1.289e-9 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 617 RVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
++ + ++YPFA +KP G+ G MTL DIN++I PP +P H P V SGK VV TKI T+
Sbjct: 221 KLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVVGKTKIRTE 287
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|44571 (AT5G48720.3 | x-ray induced transcript 1 | Chr5:19760038-19761621 FORWARD LENGTH=266 | 201606) HSP 1 Score: 58.5362 bits (140), Expect = 1.322e-9 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 617 RVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
++ + ++YPFA +KP G+ G MTL DIN++I PP +P H P V SGK VV TKI T+
Sbjct: 187 KLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVVGKTKIRTE 253
BLAST of Gohir.D01G135900.1 vs. Araport11
Match: gnl|BL_ORD_ID|44569 (AT5G48720.1 | x-ray induced transcript 1 | Chr5:19760038-19761621 FORWARD LENGTH=266 | 201606) HSP 1 Score: 58.5362 bits (140), Expect = 1.322e-9 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 617 RVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
++ + ++YPFA +KP G+ G MTL DIN++I PP +P H P V SGK VV TKI T+
Sbjct: 187 KLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVVGKTKIRTE 253
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|823134736|ref|XP_012467168.1| (PREDICTED: uncharacterized protein LOC105785603 isoform X1 [Gossypium raimondii] >gi|763747724|gb|KJB15163.1| hypothetical protein B456_002G170200 [Gossypium raimondii] >gi|1344116193|gb|PPD89326.1| hypothetical protein GOBAR_DD13739 [Gossypium barbadense]) HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1050614124|ref|XP_017629840.1| (PREDICTED: uncharacterized protein LOC108472797 isoform X1 [Gossypium arboreum]) HSP 1 Score: 503.827 bits (1296), Expect = 8.355e-179 Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1050614128|ref|XP_017629842.1| (PREDICTED: uncharacterized protein LOC108472797 isoform X3 [Gossypium arboreum]) HSP 1 Score: 503.056 bits (1294), Expect = 1.213e-178 Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|823134738|ref|XP_012467169.1| (PREDICTED: uncharacterized protein LOC105785603 isoform X2 [Gossypium raimondii] >gi|763747725|gb|KJB15164.1| hypothetical protein B456_002G170200 [Gossypium raimondii]) HSP 1 Score: 502.671 bits (1293), Expect = 1.408e-178 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDSSSSSYKVSTAKSKSFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1028963875|ref|XP_016725441.1| (PREDICTED: uncharacterized protein LOC107937129 isoform X3 [Gossypium hirsutum]) HSP 1 Score: 499.59 bits (1285), Expect = 2.499e-177 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1028963871|ref|XP_016725438.1| (PREDICTED: uncharacterized protein LOC107937129 isoform X1 [Gossypium hirsutum]) HSP 1 Score: 499.59 bits (1285), Expect = 3.629e-177 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1347705030|gb|PPS03622.1| (hypothetical protein GOBAR_AA17035 [Gossypium barbadense]) HSP 1 Score: 497.278 bits (1279), Expect = 2.120e-176 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKMKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 261
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1050614130|ref|XP_017629843.1| (PREDICTED: uncharacterized protein LOC108472797 isoform X4 [Gossypium arboreum]) HSP 1 Score: 496.123 bits (1276), Expect = 5.603e-176 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1050614126|ref|XP_017629841.1| (PREDICTED: uncharacterized protein LOC108472797 isoform X2 [Gossypium arboreum]) HSP 1 Score: 496.508 bits (1277), Expect = 6.050e-176 Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Match: gi|1028963877|ref|XP_016725442.1| (PREDICTED: uncharacterized protein LOC107937129 isoform X4 [Gossypium hirsutum]) HSP 1 Score: 492.271 bits (1266), Expect = 1.790e-174 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 2
Query: 53 MGELNSMAYTSSSLHSPSLGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAMQGYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSPEEAFDXXXXXXXXXXXXXXXFFNKDTQISSGSEDKMKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 835
MGELNSMAYTSSSLHSPS GWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRS EEAFDSSSSSYK+STAKSKSFFNKDTQISSGSEDK KKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ
Sbjct: 1 MGELNSMAYTSSSLHSPSPGWDLQNLGVLNADMSLVMDGSGTAPFFPHLDSDFSSGYLEDALLEFTEPSKRRRLLLYNDHNQFNGLNDLAM-GYWNYSCNWGLSENFSCMSQLTSINGVSDEPMSTSVSSEEANIVTEIKTPEEAIPRSFEEAFDSSSSSYKISTAKSKSFFNKDTQISSGSEDKKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQ 260 The following BLAST results are available for this feature:
BLAST of Gohir.D01G135900.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-05-23 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs Uniprot Swissprot) Total hits: 1
BLAST of Gohir.D01G135900.1 vs. ExPASy TrEMBL
Analysis Date: 2019-06-07 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs Uniprot TrEMBL) Total hits: 10
BLAST of Gohir.D01G135900.1 vs. Araport11
Analysis Date: 2019-06-07 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs arabidopsis Araport11) Total hits: 8
BLAST of Gohir.D01G135900.1 vs. NCBI nr
Analysis Date: 2019-05-23 (BLASTx of Tx_JGI v1.1 Gossypium hirsutum transcripts vs NCBI nr) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Tx_JGI v1.1 Gossypium hirsutum proteins
Date Performed: 2017-11-02
Sequences
The
following sequences are available for this feature:
mRNA sequence >Gohir.D01G135900.1_Tx-JGI_v1.1 ID=Gohir.D01G135900.1_Tx-JGI_v1.1; Name=Gohir.D01G135900.1; organism=Gossypium hirsutum; type=mRNA; length=905bpback to top protein sequence of Gohir.D01G135900.1 >Gohir.D01G135900.1-protein_Tx-JGI_v1.1 ID=Gohir.D01G135900.1-protein_Tx-JGI_v1.1; Name=Gohir.D01G135900.1; organism=Gossypium hirsutum; type=polypeptide; length=273bpback to top mRNA from alignment at D01:42006173..42007525- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Gohir.D01G135900.1_Tx-JGI_v1.1 ID=Gohir.D01G135900.1_Tx-JGI_v1.1; Name=Gohir.D01G135900.1; organism=Gossypium hirsutum; type=mRNA; length=1353bp; location=Sequence derived from: D01:42006173..42007525- (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at D01:42006173..42007525- >Gohir.D01G135900.1_Tx-JGI_v1.1 ID=Gohir.D01G135900.1_Tx-JGI_v1.1; Name=Gohir.D01G135900.1; organism=Gossypium hirsutum; type=CDS; length=822bp; location=Sequence derived from: D01:42006173..42007525- (Gossypium hirsutumback to top |