CotAD_52212, CotAD_52212_BGI-AD1_v1.0 (mRNA) Gossypium hirsutum

Transcript Overview
NameCotAD_52212
Unique NameCotAD_52212_BGI-AD1_v1.0
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length597
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt_chr2chromosomeDt_chr2:46520845..46523760 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
bhhbL0034Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhhbL2651Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
hbhbR1685Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhnR2352Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hbhnR2382Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hbrjR1202Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hbrbR1424Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hbhjR2427Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhjR2435Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhjR2452Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhjR2464Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
gbhbL0062Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhbL1171Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghhbL0059Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghhbL1130Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
hbhzR2007Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hbhzR2034Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
bzhbL0060Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhbL0068Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhbL1206Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
grbhbL0059Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
grbhbL0066Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghzhbL0053Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhbL1157Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhbL1167Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthbL0061Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghthbL1187Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghthbL1199Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
adhbL0061Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhbL1188Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhbL1196Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hbhgsR1686Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbhgsR1713Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbtoR1705Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hbtoR1719Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hbtoR1735Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hbtoR1743Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdhbL0057Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhbL1196Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hbhwR1347Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hbtwR2027Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hbtwR2057Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hbuhR1686Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hbuhR1712Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dtohbL0189Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
hbndmR2052Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hbndmR2083Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hbjmbR2007Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hbjmbR2037Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hbpscR1963Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hbpscR1981Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hbpscR1991Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyhbL0059Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhbL1182Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhbL1194Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hbhpfR1868Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hbhpfR1897Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hbhpfR1904Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
GB_D01G1000Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gbar_D01G009230.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Gh_D01G0795Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
D01G09770.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Ghir_D01G009180.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
GhirPD0101T155000.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gh_D01G095400.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Ghicr24_D01G095900.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46520845..46520907CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46520845..46520907Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46521197..46521283CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46521197..46521283Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46521368..46521436CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46521368..46521436Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46522241..46522311CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46522241..46522311Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46522938..46523043CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46522938..46523043Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46523488..46523604CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46523488..46523604Gossypium hirsutumCDS
CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46523677..46523760CotAD_52212_BGI-AD1_v1.0-CDS-Dt_chr2_BGI-AD1_v1.0-1448072452:46523677..46523760Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CotAD_52212CotAD_52212_BGI-AD1_v1.0-proteinGossypium hirsutumpolypeptide
CotAD_52212_BGI-AD1_v1.0CotAD_52212_BGI-AD1_v1.0Gossypium hirsutumpolypeptide


Homology
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1344122551|gb|PPD95268.1| (hypothetical protein GOBAR_DD07708 [Gossypium barbadense])

HSP 1 Score: 321.627 bits (823), Expect = 8.973e-108
Identity = 175/247 (70.85%), Postives = 183/247 (74.09%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILT------SFDMDLLLSV-------------------SRDLLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE------------------------VKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEASIIIAEV+KMRVEMAAMKRDAEHYSRQ+  LT       F    +L +                   S++   +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE                        VK LQQQLQKETDLHLALASAVEHCGSPSSS+PGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:   92 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEASIIIAEVRKMRVEMAAMKRDAEHYSRQLHCLTPKPIFYGFSKKKMLRIDGFCMLQIPEKRLRTLARLSKEFSPIR-GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDVTASFVQDLYLILMQHATTWVIQVKMLQQQLQKETDLHLALASAVEHCGSPSSSAPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 337
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1344128517|gb|PPE00911.1| (hypothetical protein GOBAR_DD02073 [Gossypium barbadense])

HSP 1 Score: 310.457 bits (794), Expect = 1.314e-103
Identity = 180/219 (82.19%), Postives = 181/219 (82.65%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ-------------------------ISILTSFDMDLLLSVSRDLLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALH 194
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ                         ISILTSF+MDLLLSVSRDLLTVNLGRSSINRYLQWKS KVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDK  ELLDSIAVLEI VAKLQQALH
Sbjct:  114 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQKKNAENRWSLQKDGLQGRQVTDALRISILTSFNMDLLLSVSRDLLTVNLGRSSINRYLQWKSDKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDK--ELLDSIAVLEIIVAKLQQALH 322
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1344126975|gb|PPD99439.1| (hypothetical protein GOBAR_DD03515 [Gossypium barbadense])

HSP 1 Score: 307.375 bits (786), Expect = 6.800e-103
Identity = 171/208 (82.21%), Postives = 179/208 (86.06%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAW+EEVERARQGQRDAESK SSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSF AG DSCNS SELEVKKLQQQLQKETDLHLALASAV+H GSPSSSSPGKLPDKAQELLDSIA+LEITVAKLQQALHQGPC
Sbjct:   83 MEARFRRGQKKSPEEANQMLQAWKEEVERARQGQRDAESKLSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFLAGGDSCNSYSELEVKKLQQQLQKETDLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAILEITVAKLQQALHQGPC 285
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1029032618|ref|XP_016680097.1| (PREDICTED: uncharacterized protein LOC107899012 isoform X4 [Gossypium hirsutum])

HSP 1 Score: 300.056 bits (767), Expect = 2.876e-101
Identity = 172/210 (81.90%), Postives = 178/210 (84.76%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 200
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1028982701|ref|XP_016685569.1| (PREDICTED: uncharacterized protein LOC107903660 isoform X2 [Gossypium hirsutum] >gi|1028982703|ref|XP_016685643.1| PREDICTED: uncharacterized protein LOC107903660 isoform X2 [Gossypium hirsutum])

HSP 1 Score: 295.049 bits (754), Expect = 2.197e-99
Identity = 168/208 (80.77%), Postives = 176/208 (84.62%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1028982693|ref|XP_016685314.1| (PREDICTED: uncharacterized protein LOC107903660 isoform X1 [Gossypium hirsutum] >gi|1028982695|ref|XP_016685376.1| PREDICTED: uncharacterized protein LOC107903660 isoform X1 [Gossypium hirsutum] >gi|1028982697|ref|XP_016685441.1| PREDICTED: uncharacterized protein LOC107903660 isoform X1 [Gossypium hirsutum] >gi|1028982699|ref|XP_016685505.1| PREDICTED: uncharacterized protein LOC107903660 isoform X1 [Gossypium hirsutum])

HSP 1 Score: 290.426 bits (742), Expect = 1.843e-97
Identity = 168/210 (80.00%), Postives = 176/210 (83.81%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 200
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1028982705|ref|XP_016685712.1| (PREDICTED: uncharacterized protein LOC107903660 isoform X3 [Gossypium hirsutum])

HSP 1 Score: 282.722 bits (722), Expect = 1.429e-94
Identity = 165/208 (79.33%), Postives = 173/208 (83.17%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 195
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1029032612|ref|XP_016680093.1| (PREDICTED: uncharacterized protein LOC107899012 isoform X2 [Gossypium hirsutum] >gi|1029032614|ref|XP_016680095.1| PREDICTED: uncharacterized protein LOC107899012 isoform X2 [Gossypium hirsutum])

HSP 1 Score: 275.789 bits (704), Expect = 1.887e-91
Identity = 169/224 (75.45%), Postives = 175/224 (78.12%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 214
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1029032604|ref|XP_016680089.1| (PREDICTED: uncharacterized protein LOC107899012 isoform X1 [Gossypium hirsutum] >gi|1029032606|ref|XP_016680090.1| PREDICTED: uncharacterized protein LOC107899012 isoform X1 [Gossypium hirsutum] >gi|1029032608|ref|XP_016680091.1| PREDICTED: uncharacterized protein LOC107899012 isoform X1 [Gossypium hirsutum] >gi|1029032610|ref|XP_016680092.1| PREDICTED: uncharacterized protein LOC107899012 isoform X1 [Gossypium hirsutum])

HSP 1 Score: 270.396 bits (690), Expect = 2.027e-89
Identity = 169/226 (74.78%), Postives = 175/226 (77.43%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 216
[Close]
BLAST of CotAD_52212 vs. NCBI nr
Match: gi|1029032616|ref|XP_016680096.1| (PREDICTED: uncharacterized protein LOC107899012 isoform X3 [Gossypium hirsutum])

HSP 1 Score: 263.077 bits (671), Expect = 1.691e-86
Identity = 166/224 (74.11%), Postives = 172/224 (76.79%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 211
[Close]
BLAST of CotAD_52212 vs. Soybase Glyma v1.0
Match: pacid=30544267 (transcript=Glyma.01G008900.1 locus=Glyma.01G008900 ID=Glyma.01G008900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1)

HSP 1 Score: 110.153 bits (274), Expect = 1.846e-24
Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RR QKK+PEEANQ+  +QAWQEE+ERARQGQR+AE+K SSLE     AE+QKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARVRREQKKAPEEANQVIQMQAWQEELERARQGQREAENKLSSLE-----AEMQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Soybase Glyma v1.0
Match: pacid=30544266 (transcript=Glyma.01G008900.2 locus=Glyma.01G008900 ID=Glyma.01G008900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1)

HSP 1 Score: 110.153 bits (274), Expect = 1.846e-24
Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RR QKK+PEEANQ+  +QAWQEE+ERARQGQR+AE+K SSLE     AE+QKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARVRREQKKAPEEANQVIQMQAWQEELERARQGQREAENKLSSLE-----AEMQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Soybase Glyma v1.0
Match: pacid=30560024 (transcript=Glyma.16G077500.1 locus=Glyma.16G077500 ID=Glyma.16G077500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1)

HSP 1 Score: 109.768 bits (273), Expect = 2.274e-24
Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RR QKK+PEEANQ++Q  AWQEE+ERARQGQR+AE+K SSLE     AE+QKMRVEMAAMKRDAEHYSRQ
Sbjct:  473 MEARVRREQKKAPEEANQVIQKQAWQEELERARQGQREAENKLSSLE-----AEMQKMRVEMAAMKRDAEHYSRQ 542
[Close]
BLAST of CotAD_52212 vs. Soybase Glyma v1.0
Match: pacid=30510578 (transcript=Glyma.02G178200.1 locus=Glyma.02G178200 ID=Glyma.02G178200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1)

HSP 1 Score: 56.225 bits (134), Expect = 3.298e-8
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASII 49
            +EAR    QKK+ EEANQ   AWQEE+E ARQGQR+AE+K SSLEA +I
Sbjct:  120 IEARVHGEQKKALEEANQ---AWQEELECARQGQREAENKLSSLEARLI 165
[Close]
BLAST of CotAD_52212 vs. Vitis vinifera
Match: pacid=17826097 (transcript=GSVIVT01015314001 locus=GSVIVG01015314001 ID=GSVIVT01015314001.Genoscope12X annot-version=Genoscope.12X)

HSP 1 Score: 116.701 bits (291), Expect = 5.646e-27
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSPEEANQ+  +QAWQEEVERARQGQRDAE+K SS+E     AE+QKMRVEMAAMKRDAEHYSRQ
Sbjct:  483 MEARARRGQKKSPEEANQVIQMQAWQEEVERARQGQRDAEAKLSSME-----AELQKMRVEMAAMKRDAEHYSRQ 552
[Close]
BLAST of CotAD_52212 vs. Vitis vinifera
Match: pacid=17825822 (transcript=GSVIVT01014994001 locus=GSVIVG01014994001 ID=GSVIVT01014994001.Genoscope12X annot-version=Genoscope.12X)

HSP 1 Score: 54.6842 bits (130), Expect = 2.506e-8
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  145 DLHLALASAVEHCXXXXXXXXXKLPDKAQELLDSIAVLEITVAKLQQAL 193
            DL+LALASA EH          +LP KAQELLDSIAVLEITV+KL+Q L
Sbjct:  102 DLNLALASAAEH-SSSPFSDSFQLPAKAQELLDSIAVLEITVSKLEQKL 149
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431109 (transcript=Thecc1EG037800t4 locus=Thecc1EG037800 ID=Thecc1EG037800t4.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 124.02 bits (310), Expect = 6.510e-29
Identity = 63/73 (86.30%), Postives = 65/73 (89.04%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM+QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 541
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431112 (transcript=Thecc1EG037800t6 locus=Thecc1EG037800 ID=Thecc1EG037800t6.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 120.168 bits (300), Expect = 1.158e-27
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM  +QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQMQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431111 (transcript=Thecc1EG037800t5 locus=Thecc1EG037800 ID=Thecc1EG037800t5.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-27
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM  +QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQMQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431108 (transcript=Thecc1EG037800t3 locus=Thecc1EG037800 ID=Thecc1EG037800t3.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 119.013 bits (297), Expect = 2.183e-27
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM  +QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQMQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431107 (transcript=Thecc1EG037800t2 locus=Thecc1EG037800 ID=Thecc1EG037800t2.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 119.013 bits (297), Expect = 2.183e-27
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM  +QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQMQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27431110 (transcript=Thecc1EG037800t1 locus=Thecc1EG037800 ID=Thecc1EG037800t1.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 119.013 bits (297), Expect = 2.495e-27
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSP+EANQM  +QAWQEEVERARQGQRDAESK SSLE      EVQKMRVEMAAMKRDAEHYSRQ
Sbjct:  474 MEARARRGQKKSPDEANQMIQMQAWQEEVERARQGQRDAESKLSSLE-----VEVQKMRVEMAAMKRDAEHYSRQ 543
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27430982 (transcript=Thecc1EG037435t3 locus=Thecc1EG037435 ID=Thecc1EG037435t3.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 111.694 bits (278), Expect = 3.789e-25
Identity = 65/126 (51.59%), Postives = 70/126 (55.56%), Query Frame = 1 
Query:   92 LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSXXXXXXXX--------------------------XXXXXXTDLHLALASAVEHCXXXXXXXXXKLPDKAQELLDSIAVLEITVAKLQQ 191
            +L +N   SSINRYLQWKSGKVWS+SFSAGDD CNSCS                                        TDLHLALASAVEH          KLPDK QELLDSIAVLEITV+KL+Q
Sbjct:   38 ILPINWA-SSINRYLQWKSGKVWSRSFSAGDDPCNSCSELQDTKPQERSGQGKSQQMCHYKYQLEQDVKKLQQQLQEETDLHLALASAVEHSGSPSPNSPSKLPDKVQELLDSIAVLEITVSKLEQ 162
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27430981 (transcript=Thecc1EG037435t2 locus=Thecc1EG037435 ID=Thecc1EG037435t2.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 111.309 bits (277), Expect = 4.867e-25
Identity = 65/126 (51.59%), Postives = 70/126 (55.56%), Query Frame = 1 
Query:   92 LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSXXXXXXXXXXX--------------------------XXXTDLHLALASAVEHCXXXXXXXXXKLPDKAQELLDSIAVLEITVAKLQQ 191
            +L +N   SSINRYLQWKSGKVWS+SFSAGDD CNSCS                                        TDLHLALASAVEH          KLPDK QELLDSIAVLEITV+KL+Q
Sbjct:   38 ILPINWA-SSINRYLQWKSGKVWSRSFSAGDDPCNSCSELQDTKPQERSGQGKSQQMCHYKYQLEQDVKKLQQQLQEETDLHLALASAVEHSGSPSPNSPSKLPDKVQELLDSIAVLEITVSKLEQ 162
[Close]
BLAST of CotAD_52212 vs. Cacao Genome Database
Match: pacid=27430980 (transcript=Thecc1EG037435t1 locus=Thecc1EG037435 ID=Thecc1EG037435t1.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 111.309 bits (277), Expect = 4.867e-25
Identity = 65/126 (51.59%), Postives = 70/126 (55.56%), Query Frame = 1 
Query:   92 LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSXXXXXXXXXXX--------------------------XXXTDLHLALASAVEHCXXXXXXXXXKLPDKAQELLDSIAVLEITVAKLQQ 191
            +L +N   SSINRYLQWKSGKVWS+SFSAGDD CNSCS                                        TDLHLALASAVEH          KLPDK QELLDSIAVLEITV+KL+Q
Sbjct:   38 ILPINWA-SSINRYLQWKSGKVWSRSFSAGDDPCNSCSELQDTKPQERSGQGKSQQMCHYKYQLEQDVKKLQQQLQEETDLHLALASAVEHSGSPSPNSPSKLPDKVQELLDSIAVLEITVSKLEQ 162
[Close]
BLAST of CotAD_52212 vs. Rice Genome Annotation Project
Match: protein|retrotransposon (protein, putative, unclassified, expressed)

HSP 1 Score: 101.679 bits (252), Expect = 5.623e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RR QKK  EEANQ+  +QAWQEEVERARQ QR+AE+K SSLE     AE+QKMRVEMA MKRDAEHYSRQ
Sbjct:  483 MEARNRRAQKKPSEEANQVIQMQAWQEEVERARQSQREAETKISSLE-----AELQKMRVEMAGMKRDAEHYSRQ 552
[Close]
BLAST of CotAD_52212 vs. Populus trichicarpa v2.0
Match: pacid=27010971 (transcript=Potri.018G086600.1 locus=Potri.018G086600 ID=Potri.018G086600.1.v3.0 annot-version=v3.0)

HSP 1 Score: 114.39 bits (285), Expect = 4.990e-26
Identity = 61/75 (81.33%), Postives = 62/75 (82.67%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RRGQKKSPEEANQM  +QAWQEEVERARQGQRDAESK S  E      E QKMRVEMAAMKRDAEHYSRQ
Sbjct:  483 MEARARRGQKKSPEEANQMIQMQAWQEEVERARQGQRDAESKLSYTE-----TEAQKMRVEMAAMKRDAEHYSRQ 552
[Close]
BLAST of CotAD_52212 vs. Populus trichicarpa v2.0
Match: pacid=27000298 (transcript=Potri.T062700.1 locus=Potri.T062700 ID=Potri.T062700.1.v3.0 annot-version=v3.0)

HSP 1 Score: 67.0106 bits (162), Expect = 8.836e-12
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 1 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRD----AESKPSSLEASIII--AEVQKMRVEMAAMKRDAEHYSRQ 73
            MEA   RGQ KSPEEANQM+Q       R+R G++     A+ +     +S I+   EVQKMRVEMAAMKRDA+HYSRQ
Sbjct:  117 MEALALRGQNKSPEEANQMIQL------RSRPGKKKWNVLAKVREMQRASSPILRQTEVQKMRVEMAAMKRDADHYSRQ 189
[Close]
BLAST of CotAD_52212 vs. Populus trichicarpa v2.0
Match: pacid=27008622 (transcript=Potri.006G216800.1 locus=Potri.006G216800 ID=Potri.006G216800.1.v3.0 annot-version=v3.0)

HSP 1 Score: 57.7658 bits (138), Expect = 5.141e-9
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:  148 LALASAVEHCXXXXXXXXXKLPDKAQELLDSIAVLEITVAKLQQ 191
            LALASAVEH          +LPDKAQELLDSIA+LEITV+KL+Q
Sbjct:  121 LALASAVEHSDSSLSNSPCQLPDKAQELLDSIAILEITVSKLEQ 164
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A2P5S890_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD07708 PE=4 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 7.538e-108
Identity = 175/247 (70.85%), Postives = 183/247 (74.09%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILT------SFDMDLLLSV-------------------SRDLLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE------------------------VKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEASIIIAEV+KMRVEMAAMKRDAEHYSRQ+  LT       F    +L +                   S++   +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE                        VK LQQQLQKETDLHLALASAVEHCGSPSSS+PGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:   92 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEASIIIAEVRKMRVEMAAMKRDAEHYSRQLHCLTPKPIFYGFSKKKMLRIDGFCMLQIPEKRLRTLARLSKEFSPIR-GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDVTASFVQDLYLILMQHATTWVIQVKMLQQQLQKETDLHLALASAVEHCGSPSSSAPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 337
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A2P5SPB7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD02073 PE=4 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.104e-103
Identity = 180/219 (82.19%), Postives = 181/219 (82.65%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ-------------------------ISILTSFDMDLLLSVSRDLLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALH 194
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ                         ISILTSF+MDLLLSVSRDLLTVNLGRSSINRYLQWKS KVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDK  ELLDSIAVLEI VAKLQQALH
Sbjct:  114 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQKKNAENRWSLQKDGLQGRQVTDALRISILTSFNMDLLLSVSRDLLTVNLGRSSINRYLQWKSDKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDK--ELLDSIAVLEIIVAKLQQALH 322
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A2P5SK98_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD03515 PE=4 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.712e-103
Identity = 171/208 (82.21%), Postives = 179/208 (86.06%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAW+EEVERARQGQRDAESK SSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSF AG DSCNS SELEVKKLQQQLQKETDLHLALASAV+H GSPSSSSPGKLPDKAQELLDSIA+LEITVAKLQQALHQGPC
Sbjct:   83 MEARFRRGQKKSPEEANQMLQAWKEEVERARQGQRDAESKLSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFLAGGDSCNSYSELEVKKLQQQLQKETDLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAILEITVAKLQQALHQGPC 285
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8IPP1_GOSHI (uncharacterized protein LOC107899012 isoform X4 OS=Gossypium hirsutum OX=3635 GN=LOC107899012 PE=4 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 2.416e-101
Identity = 172/210 (81.90%), Postives = 178/210 (84.76%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 200
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8JBF4_GOSHI (uncharacterized protein LOC107903660 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107903660 PE=4 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.846e-99
Identity = 168/208 (80.77%), Postives = 176/208 (84.62%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8J4Z2_GOSHI (uncharacterized protein LOC107903660 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107903660 PE=4 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 1.548e-97
Identity = 168/210 (80.00%), Postives = 176/210 (83.81%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 200
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8J5T6_GOSHI (uncharacterized protein LOC107903660 isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107903660 PE=4 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.201e-94
Identity = 165/208 (79.33%), Postives = 173/208 (83.17%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     +VQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNS SELEVKKLQQQLQKET+LHLALASAV+H GSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----KVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSYSELEVKKLQQQLQKETNLHLALASAVQHYGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 195
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8IPV9_GOSHI (uncharacterized protein LOC107899012 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107899012 PE=4 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.585e-91
Identity = 169/224 (75.45%), Postives = 175/224 (78.12%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 214
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8IPN7_GOSHI (uncharacterized protein LOC107899012 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107899012 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.702e-89
Identity = 169/226 (74.78%), Postives = 175/226 (77.43%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ  AWQEEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQMQAWQEEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 216
[Close]
BLAST of CotAD_52212 vs. ExPASy TrEMBL
Match: A0A1U8IPN9_GOSHI (uncharacterized protein LOC107899012 isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107899012 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.420e-86
Identity = 166/224 (74.11%), Postives = 172/224 (76.79%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVS--------RD--LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKL----------------QQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 198
            MEARFRRGQKKSPEEANQMLQ   EEVERARQGQRDAESK SSLEA     EVQKMRVEMAAMKRDAEHYSRQ+     F    +L +         +D  LL +  GRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELE   L                QQQLQ+ETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
Sbjct:    1 MEARFRRGQKKSPEEANQMLQ---EEVERARQGQRDAESKLSSLEA-----EVQKMRVEMAAMKRDAEHYSRQV-----FQRRKMLRIDGLCKKMGYKDAKLLMLYGGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCSELEDLYLILMQHATTWVIQVKKLQQQLQEETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC 211
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|14765 (AT2G19950.2 | golgin Putative 1 | Chr2:8616341-8621219 REVERSE LENGTH=710 | 201606)

HSP 1 Score: 105.145 bits (261), Expect = 4.049e-26
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            ME R RRGQKK+P+EANQ++Q  AWQ+EV+RARQGQRDAE K S +EA     E+QK+RVEMAAMKRDAEHYSRQ
Sbjct:  486 MEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDAEEKLSLMEA-----EMQKLRVEMAAMKRDAEHYSRQ 555
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|14764 (AT2G19950.1 | golgin Putative 1 | Chr2:8616341-8621219 REVERSE LENGTH=707 | 201606)

HSP 1 Score: 105.145 bits (261), Expect = 4.083e-26
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            ME R RRGQKK+P+EANQ++Q  AWQ+EV+RARQGQRDAE K S +EA     E+QK+RVEMAAMKRDAEHYSRQ
Sbjct:  483 MEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDAEEKLSLMEA-----EMQKLRVEMAAMKRDAEHYSRQ 552
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|35825 (AT4G33130.1 | rho GTPase-activating protein | Chr4:15979437-15980655 REVERSE LENGTH=222 | 201606)

HSP 1 Score: 93.2041 bits (230), Expect = 2.160e-23
Identity = 59/125 (47.20%), Postives = 75/125 (60.00%), Query Frame = 0 
Query:   93 LTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSC-------------------------NSCS-ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQ 191
            L +N G SSI RYL+ K+G    +S+S+GD S                            C  E ++K+LQQQLQ+E +L LAL SAVEH  SP   SP +LPDKAQELLDS+A+LEITV+KL+Q
Sbjct:   35 LPINWG-SSIRRYLK-KTGTFSRRSYSSGDGSLFFPDLDESKMIDQTSGRFDGKTKLWYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSSSPFMDSPCELPDKAQELLDSLAILEITVSKLEQ 157
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|35827 (AT4G33130.3 | rho GTPase-activating protein | Chr4:15979437-15980655 REVERSE LENGTH=223 | 201606)

HSP 1 Score: 92.8189 bits (229), Expect = 3.028e-23
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 0 
Query:   93 LTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSC--------------------------NSCS-ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQ 191
            L +N G SSI RYL+ K+G    +S+S+GD S                             C  E ++K+LQQQLQ+E +L LAL SAVEH  SP   SP +LPDKAQELLDS+A+LEITV+KL+Q
Sbjct:   35 LPINWG-SSIRRYLK-KTGTFSRRSYSSGDGSLFFPDLDQESKMIDQTSGRFDGKTKLWYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSSSPFMDSPCELPDKAQELLDSLAILEITVSKLEQ 158
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|35828 (AT4G33130.4 | rho GTPase-activating protein | Chr4:15979437-15980188 REVERSE LENGTH=148 | 201606)

HSP 1 Score: 85.1149 bits (209), Expect = 4.854e-21
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:  130 ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQ 191
            E ++K+LQQQLQ+E +L LAL SAVEH  SP   SP +LPDKAQELLDS+A+LEITV+KL+Q
Sbjct:   22 EQDIKRLQQQLQEEINLRLALTSAVEHSSSPFMDSPCELPDKAQELLDSLAILEITVSKLEQ 83
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|35826 (AT4G33130.2 | rho GTPase-activating protein | Chr4:15979751-15980655 REVERSE LENGTH=147 | 201606)

HSP 1 Score: 60.077 bits (144), Expect = 1.609e-11
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:   93 LTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSC-------------------------NSCS-ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDK 171
            L +N G SSI RYL+ K+G    +S+S+GD S                            C  E ++K+LQQQLQ+E +L LAL SAVEH  SP   SP +LPDK
Sbjct:   35 LPINWG-SSIRRYLK-KTGTFSRRSYSSGDGSLFFPDLDESKMIDQTSGRFDGKTKLWYKCELEQDIKRLQQQLQEEINLRLALTSAVEHSSSPFMDSPCELPDK 137
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|3205 (AT1G16750.2 | GPI-anchored adhesin-like protein%2C putative (Protein of unknown function%2C DUF547) | Chr1:5729758-5731689 REVERSE LENGTH=403 | 201606)

HSP 1 Score: 49.2914 bits (116), Expect = 5.526e-7
Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0 
Query:   92 LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCS-------ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQAL 193
            LLT   G  S++ Y Q K+    +K F+  D   NS         E +VK+L+ QLQKET +   L  A +       S    LP   QELL +IA +E TV+KL+Q +
Sbjct:    6 LLTSKQGGGSLSIYSQPKNV---TKEFNGRDSPKNSKFHHYRFELEHDVKRLKNQLQKETAMRALLLKASDQSHKIELSHASSLPRSVQELLTNIAAMEATVSKLEQEI 111
[Close]
BLAST of CotAD_52212 vs. Araport11
Match: gnl|BL_ORD_ID|3204 (AT1G16750.1 | GPI-anchored adhesin-like protein%2C putative (Protein of unknown function%2C DUF547) | Chr1:5729221-5731689 REVERSE LENGTH=529 | 201606)

HSP 1 Score: 48.9062 bits (115), Expect = 8.554e-7
Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0 
Query:   92 LLTVNLGRSSINRYLQWKSGKVWSKSFSAGDDSCNSCS-------ELEVKKLQQQLQKETDLHLALASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQAL 193
            LLT   G  S++ Y Q K+    +K F+  D   NS         E +VK+L+ QLQKET +   L  A +       S    LP   QELL +IA +E TV+KL+Q +
Sbjct:    6 LLTSKQGGGSLSIYSQPKNV---TKEFNGRDSPKNSKFHHYRFELEHDVKRLKNQLQKETAMRALLLKASDQSHKIELSHASSLPRSVQELLTNIAAMEATVSKLEQEI 111
[Close]
BLAST of CotAD_52212 vs. ExPASy Swiss-Prot
Match: GOGC1_ARATH (Golgin candidate 1 OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.930e-25
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQMLQ--AWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            ME R RRGQKK+P+EANQ++Q  AWQ+EV+RARQGQRDAE K S +EA     E+QK+RVEMAAMKRDAEHYSRQ
Sbjct:  483 MEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDAEEKLSLMEA-----EMQKLRVEMAAMKRDAEHYSRQ 552
[Close]
BLAST of CotAD_52212 vs. ExPASy Swiss-Prot
Match: GOGA5_ORYSJ (Golgin-84 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0744400 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.236e-24
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 0 
Query:    1 MEARFRRGQKKSPEEANQM--LQAWQEEVERARQGQRDAESKPSSLEASIIIAEVQKMRVEMAAMKRDAEHYSRQ 73
            MEAR RR QKK  EEANQ+  +QAWQEEVERARQ QR+AE+K SSLE     AE+QKMRVEMA MKRDAEHYSRQ
Sbjct:  483 MEARNRRAQKKPSEEANQVIQMQAWQEEVERARQSQREAETKISSLE-----AELQKMRVEMAGMKRDAEHYSRQ 552
The following BLAST results are available for this feature:
BLAST of CotAD_52212 vs. NCBI nr
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1344122551|gb|PPD95268.1|8.973e-10870.85hypothetical protein GOBAR_DD07708 [Gossypium barb... [more]
gi|1344128517|gb|PPE00911.1|1.314e-10382.19hypothetical protein GOBAR_DD02073 [Gossypium barb... [more]
gi|1344126975|gb|PPD99439.1|6.800e-10382.21hypothetical protein GOBAR_DD03515 [Gossypium barb... [more]
gi|1029032618|ref|XP_016680097.1|2.876e-10181.90PREDICTED: uncharacterized protein LOC107899012 is... [more]
gi|1028982701|ref|XP_016685569.1|2.197e-9980.77PREDICTED: uncharacterized protein LOC107903660 is... [more]
gi|1028982693|ref|XP_016685314.1|1.843e-9780.00PREDICTED: uncharacterized protein LOC107903660 is... [more]
gi|1028982705|ref|XP_016685712.1|1.429e-9479.33PREDICTED: uncharacterized protein LOC107903660 is... [more]
gi|1029032612|ref|XP_016680093.1|1.887e-9175.45PREDICTED: uncharacterized protein LOC107899012 is... [more]
gi|1029032604|ref|XP_016680089.1|2.027e-8974.78PREDICTED: uncharacterized protein LOC107899012 is... [more]
gi|1029032616|ref|XP_016680096.1|1.691e-8674.11PREDICTED: uncharacterized protein LOC107899012 is... [more]
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BLAST of CotAD_52212 vs. Soybase Glyma v1.0
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Soybase Glyma)
Total hits: 4
Match NameE-valueIdentityDescription
pacid=305442671.846e-2477.33transcript=Glyma.01G008900.1 locus=Glyma.01G008900... [more]
pacid=305442661.846e-2477.33transcript=Glyma.01G008900.2 locus=Glyma.01G008900... [more]
pacid=305600242.274e-2477.33transcript=Glyma.16G077500.1 locus=Glyma.16G077500... [more]
pacid=305105783.298e-865.31transcript=Glyma.02G178200.1 locus=Glyma.02G178200... [more]
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BLAST of CotAD_52212 vs. Vitis vinifera
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Vitis vinifera Genome)
Total hits: 2
Match NameE-valueIdentityDescription
pacid=178260975.646e-2781.33transcript=GSVIVT01015314001 locus=GSVIVG010153140... [more]
pacid=178258222.506e-865.31transcript=GSVIVT01014994001 locus=GSVIVG010149940... [more]
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BLAST of CotAD_52212 vs. Cacao Genome Database
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Cacao)
Total hits: 9
Match NameE-valueIdentityDescription
pacid=274311096.510e-2986.30transcript=Thecc1EG037800t4 locus=Thecc1EG037800 I... [more]
pacid=274311121.158e-2784.00transcript=Thecc1EG037800t6 locus=Thecc1EG037800 I... [more]
pacid=274311111.943e-2784.00transcript=Thecc1EG037800t5 locus=Thecc1EG037800 I... [more]
pacid=274311082.183e-2784.00transcript=Thecc1EG037800t3 locus=Thecc1EG037800 I... [more]
pacid=274311072.183e-2784.00transcript=Thecc1EG037800t2 locus=Thecc1EG037800 I... [more]
pacid=274311102.495e-2784.00transcript=Thecc1EG037800t1 locus=Thecc1EG037800 I... [more]
pacid=274309823.789e-2551.59transcript=Thecc1EG037435t3 locus=Thecc1EG037435 I... [more]
pacid=274309814.867e-2551.59transcript=Thecc1EG037435t2 locus=Thecc1EG037435 I... [more]
pacid=274309804.867e-2551.59transcript=Thecc1EG037435t1 locus=Thecc1EG037435 I... [more]
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BLAST of CotAD_52212 vs. Rice Genome Annotation Project
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Oryza sativa)
Total hits: 1
Match NameE-valueIdentityDescription
protein|retrotransposon5.623e-2274.67protein, putative, unclassified, expressed[more]
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BLAST of CotAD_52212 vs. Populus trichicarpa v2.0
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Populus Genome)
Total hits: 3
Match NameE-valueIdentityDescription
pacid=270109714.990e-2681.33transcript=Potri.018G086600.1 locus=Potri.018G0866... [more]
pacid=270002988.836e-1254.43transcript=Potri.T062700.1 locus=Potri.T062700 ID=... [more]
pacid=270086225.141e-968.18transcript=Potri.006G216800.1 locus=Potri.006G2168... [more]
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BLAST of CotAD_52212 vs. ExPASy TrEMBL
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2P5S890_GOSBA7.538e-10870.85Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5SPB7_GOSBA1.104e-10382.19Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5SK98_GOSBA5.712e-10382.21Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A1U8IPP1_GOSHI2.416e-10181.90uncharacterized protein LOC107899012 isoform X4 OS... [more]
A0A1U8JBF4_GOSHI1.846e-9980.77uncharacterized protein LOC107903660 isoform X2 OS... [more]
A0A1U8J4Z2_GOSHI1.548e-9780.00uncharacterized protein LOC107903660 isoform X1 OS... [more]
A0A1U8J5T6_GOSHI1.201e-9479.33uncharacterized protein LOC107903660 isoform X3 OS... [more]
A0A1U8IPV9_GOSHI1.585e-9175.45uncharacterized protein LOC107899012 isoform X2 OS... [more]
A0A1U8IPN7_GOSHI1.702e-8974.78uncharacterized protein LOC107899012 isoform X1 OS... [more]
A0A1U8IPN9_GOSHI1.420e-8674.11uncharacterized protein LOC107899012 isoform X3 OS... [more]
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BLAST of CotAD_52212 vs. Araport11
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|147654.049e-2672.00AT2G19950.2 | golgin Putative 1 | Chr2:8616341-862... [more]
gnl|BL_ORD_ID|147644.083e-2672.00AT2G19950.1 | golgin Putative 1 | Chr2:8616341-862... [more]
gnl|BL_ORD_ID|358252.160e-2347.20AT4G33130.1 | rho GTPase-activating protein | Chr4... [more]
gnl|BL_ORD_ID|358273.028e-2346.83AT4G33130.3 | rho GTPase-activating protein | Chr4... [more]
gnl|BL_ORD_ID|358284.854e-2167.74AT4G33130.4 | rho GTPase-activating protein | Chr4... [more]
gnl|BL_ORD_ID|358261.609e-1140.95AT4G33130.2 | rho GTPase-activating protein | Chr4... [more]
gnl|BL_ORD_ID|32055.526e-736.70AT1G16750.2 | GPI-anchored adhesin-like protein%2C... [more]
gnl|BL_ORD_ID|32048.554e-736.70AT1G16750.1 | GPI-anchored adhesin-like protein%2C... [more]
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BLAST of CotAD_52212 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot Swiss-Prot)
Total hits: 2
Match NameE-valueIdentityDescription
GOGC1_ARATH3.930e-2572.00Golgin candidate 1 OS=Arabidopsis thaliana OX=3702... [more]
GOGA5_ORYSJ6.236e-2474.67Golgin-84 OS=Oryza sativa subsp. japonica OX=39947... [more]
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InterPro
Analysis Name: InterProScan analysis of Gossypium hirsutum AD1 genome protein v1.0 (BGI-CGP)
Date Performed: 2015-11-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..41
NoneNo IPR availableCOILSCoilCoilcoord: 126..147
NoneNo IPR availableCOILSCoilCoilcoord: 172..193
NoneNo IPR availableCOILSCoilCoilcoord: 53..74
IPR025757Ternary complex factor MIP1, leucine-zipperPFAMPF14389Lzipper-MIP1coord: 130..193
e-value: 1.5E-17
score: 63.3

Sequences
The following sequences are available for this feature:

mRNA sequence

>CotAD_52212_BGI-AD1_v1.0 ID=CotAD_52212_BGI-AD1_v1.0; Name=CotAD_52212; organism=Gossypium hirsutum; type=mRNA; length=597bp
ATGGAAGCTCGTTTTCGTCGTGGACAAAAGAAGTCCCCAGAAGAAGCAAA
TCAAATGCTTCAGGCATGGCAGGAGGAAGTGGAGCGTGCACGCCAAGGTC
AAAGAGATGCTGAGAGCAAGCCCTCTTCATTAGAGGCAAGTATTATCATT
GCTGAAGTGCAGAAAATGAGGGTTGAAATGGCTGCCATGAAGAGGGACGC
TGAGCATTATTCACGCCAGATTTCCATTCTAACTAGCTTCGATATGGATC
TGCTGCTTTCAGTTTCACGTGATCTCCTCACTGTTAACTTGGGAAGAAGT
TCTATTAATAGGTATTTACAATGGAAGAGTGGTAAGGTTTGGAGCAAGTC
ATTTTCAGCTGGGGATGATTCTTGTAATTCTTGTTCTGAATTGGAGGTTA
AAAAGTTGCAGCAGCAGTTGCAGAAAGAGACCGATTTGCACTTAGCTCTA
GCAAGTGCTGTTGAACATTGTGGTTCACCTTCTTCTAGTTCTCCAGGCAA
GCTTCCAGATAAGGCCCAGGAGCTTTTAGATAGCATAGCTGTTCTCGAGA
TTACCGTAGCAAAGTTACAGCAAGCATTACACCAGGGACCGTGTTAA
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protein sequence of CotAD_52212_BGI-AD1_v1.0

>CotAD_52212_BGI-AD1_v1.0 ID=CotAD_52212_BGI-AD1_v1.0; Name=CotAD_52212_BGI-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=198bp
MEARFRRGQKKSPEEANQMLQAWQEEVERARQGQRDAESKPSSLEASIII
AEVQKMRVEMAAMKRDAEHYSRQISILTSFDMDLLLSVSRDLLTVNLGRS
SINRYLQWKSGKVWSKSFSAGDDSCNSCSELEVKKLQQQLQKETDLHLAL
ASAVEHCGSPSSSSPGKLPDKAQELLDSIAVLEITVAKLQQALHQGPC
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mRNA from alignment at Dt_chr2:46520845..46523760+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CotAD_52212_BGI-AD1_v1.0 ID=CotAD_52212_BGI-AD1_v1.0; Name=CotAD_52212; organism=Gossypium hirsutum; type=mRNA; length=2916bp; location=Sequence derived from: Dt_chr2:46520845..46523760+ (Gossypium hirsutum
ATGGAAGCTCGTTTTCGTCGTGGACAAAAGAAGTCCCCAGAAGAAGCAAA
TCAAATGCTTCAGGTAAATATGATAAGGATGTAACTTTCTGAACTCTGTC
TTGCAAATTATATTTTTTGGTCTATTTCCATCTAGCCAGTCTAGAAAATA
AAATGCATCTTACCTATTTGATTTCAGTACCTCAAGTAATCTACTGGAAT
GTGGGTTTCTATATCATTAAGAACATTCTGAAGTTAACAGTTCAAAATGT
AATTAATATCTAGTTATAGGCACAATCTGTGGCCATTAGCTGTTCCACCA
ACTGTAATTAATGTAAGAGGCAGTGGCTTAAAGATGGTGATGTTAGATGC
AGGCATGGCAGGAGGAAGTGGAGCGTGCACGCCAAGGTCAAAGAGATGCT
GAGAGCAAGCCCTCTTCATTAGAGGCAAGTATTATCATTGTACATTTATA
TCAAGATTATTTTGTTTTCTTTTGCTGGCTGATTTGTGGATTTATTTTCT
CTGATCTATTTGTCTGGCTGCAGGCTGAAGTGCAGAAAATGAGGGTTGAA
ATGGCTGCCATGAAGAGGGACGCTGAGCATTATTCACGCCAGGTAACTGT
TAAGATTGATTCACCTTTTAATTAGAAGTGTGGTTGTCAATTGTATTGAT
GATGTATAAACTGAAAGCGCTTATTATAGTAACTGTTGAACTTAGTGAAG
CCTTAAATTTCATTGCTTATTTGATTTATGTAGTTGTATATCAACTATCA
AGTTATATGGCACTGATTTACTGTTGTTGATATCTTATTTCTTAAATTTT
CCATCTCATCTGAAACTGTGATGAAATTCAATTCATCAGTTGCTTTCCAT
ATGCTAGTTTATAAAGTATATTTCAAACCAGGCATTATTTTATTTTCTAA
CCCTCATTTTTTAGCATACTTTTCTTAACATGGAAGAATAAGCTATGATT
TTGACCTTGATGTTGATGGAAGTCGCATTATTTAACACCAAAACCCATAT
TTTACGGGTTTTTCAAAGAAGAAAATGCTGAGAATAGATGGTCTCTGCAA
AAAGATGGGCTATAAGGACACCAAGTTACTGATGCTTTACGAGTATTAGA
TTTATCCTTTTTCATCTGTTTCTTGTGTGTTCCTAGCTTTCACTGTAAAA
TGGGATAGCTAAATTATATGGTTTCTGCATGCTCCAAATTCCTGAAAAAA
GGTTGAGAACATTGGCAAGTAAATTTTTAGAGAAAGTTCTATGAAGTTTT
TTATGGATTCTGTGGCGCAGACCCATATTTTTTATTTTGGCATATCATGT
AATTGTTGTACAAGTAAAAAGTAGACTGAAGCAGTTTACTAAGAAGTTTT
TAGAGAAAGTTCTATGAAGTTTTAATCTATGCTTGCTTTCCCATAGATTT
CCATTCTAACTAGCTTCGATATGGATCTGCTGCTTTCAGTTTCACGTGAT
CTCCTCACTGTTAACTTGTAATTATCCTTTTTCCTCACTGTTGAAGTCAA
GTTCGTTGTAAACCCCCACTTTTAAAAATATATATACATTTGTTTCAATT
TATTCTGTTGAGTTTACTTGAAAATTTGTGGAATTATGTATTACTTGCTT
TATTTTTTTAATAGCTTATACTGTTAGTGAATTAGATAGATTTACTCCCT
GTTATACCTATATCTAAGTTGAAATTATATATATGCCTTTGCATTCCAAA
TATGAAAAATTGGAAATTAGGCATAGCCTATTGAAATTGGTGTTTTGATA
TGAATGTGTTATGCTTCTGTTTGTGCAAATCTGCATCGTACCATGGTAGG
ATATTCAACATTTGAGTTTGTGTTGAACAAATATGCAATGGAAGTGCTTT
GTAGGATTATCAAAGGAATTCTCACCAATAAGGTTTGTTTTACATGATTT
TTTTATGTGCAATTGTTTTTACTATCAAATTCTTGCTCATATTTTAGTTT
AATAGCTTTTCATTTTTGAGATGGTTATAATGGGGGTTTTATTCTACCAA
TCAGTTGGTGGGTCTTTTTTTTGTCCTTTTTCATTTTCTGCTTTTTTTTC
TGGTTTTGTAATGGTGAATGCAGTATGGTTGATGGTTTTGCAGGGGAAGA
AGTTCTATTAATAGGTATTTACAATGGAAGAGTGGTAAGGTTTGGAGCAA
GTCATTTTCAGCTGGGGATGATTCTTGTAATTCTTGTTCTGAATTGGAGG
TAATTTGCAATAGCTAATTTTATTATGTTCCTTAAAATTTCCAGAATCCA
AATTATTATGAGGGGAAATTGTTAATTTTACTAAGAGAGCAAGGGTTTTT
ATTATGAATTTATGATATATTTGATTAGGTTTGTTGAAAAGAGTTTTAGA
TTCTGAAATCATGTTGTTATACCAGGATGGTAAGTCCCATTAAAAGAGTT
TTAAATTCTGAAATCATGTTTTTATACCAGCAAAGAAGCATCGGCATAAT
AATAGACTTTTAAGGGGAGACATATGAAAACATGAAACAATTGTTTACTC
GTTGAGAATTTGCTAATGAATGACATGCCGTTATCATGATATACATGTTT
TGATTTTCTTTTTTTTTCTTACCGGTAACAGCCAGCTTTGTGCAGGATTT
ATATCTCATTCTCATGCAACATGCTACCACTTGGGTGATACAGGTTAAAA
AGTTGCAGCAGCAGTTGCAGAAAGAGACCGATTTGCACTTAGCTCTAGCA
AGTGCTGTTGAACATTGTGGTTCACCTTCTTCTAGTTCTCCAGGCAAGCT
TCCAGATAAGGTCAGTCTCCTTCTATGGGATTTCTGTTCTTTTTTTATGT
TCTTTTCTCAATTTCTGAAACTTGGATTTCAGGCCCAGGAGCTTTTAGAT
AGCATAGCTGTTCTCGAGATTACCGTAGCAAAGTTACAGCAAGCATTACA
CCAGGGACCGTGTTAA
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Coding sequence (CDS) from alignment at Dt_chr2:46520845..46523760+

>CotAD_52212_BGI-AD1_v1.0 ID=CotAD_52212_BGI-AD1_v1.0; Name=CotAD_52212; organism=Gossypium hirsutum; type=CDS; length=597bp; location=Sequence derived from: Dt_chr2:46520845..46523760+ (Gossypium hirsutum
ATGGAAGCTCGTTTTCGTCGTGGACAAAAGAAGTCCCCAGAAGAAGCAAA
TCAAATGCTTCAGGCATGGCAGGAGGAAGTGGAGCGTGCACGCCAAGGTC
AAAGAGATGCTGAGAGCAAGCCCTCTTCATTAGAGGCAAGTATTATCATT
GCTGAAGTGCAGAAAATGAGGGTTGAAATGGCTGCCATGAAGAGGGACGC
TGAGCATTATTCACGCCAGATTTCCATTCTAACTAGCTTCGATATGGATC
TGCTGCTTTCAGTTTCACGTGATCTCCTCACTGTTAACTTGGGAAGAAGT
TCTATTAATAGGTATTTACAATGGAAGAGTGGTAAGGTTTGGAGCAAGTC
ATTTTCAGCTGGGGATGATTCTTGTAATTCTTGTTCTGAATTGGAGGTTA
AAAAGTTGCAGCAGCAGTTGCAGAAAGAGACCGATTTGCACTTAGCTCTA
GCAAGTGCTGTTGAACATTGTGGTTCACCTTCTTCTAGTTCTCCAGGCAA
GCTTCCAGATAAGGCCCAGGAGCTTTTAGATAGCATAGCTGTTCTCGAGA
TTACCGTAGCAAAGTTACAGCAAGCATTACACCAGGGACCGTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025757MIP1_Leuzipper