CotAD_65531, CotAD_65531_BGI-AD1_v1.0 (mRNA) Gossypium hirsutum

Transcript Overview
NameCotAD_65531
Unique NameCotAD_65531_BGI-AD1_v1.0
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length378
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At_chr12chromosomeAt_chr12:61570972..61571349 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
bhhbL1462Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
bhhbL3224Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
hbhbL1762Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbhnR4791Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hbhnR4880Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hbrjR2440Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hbrbR2824Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hbhjR4932Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hbhjR5018Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
gbhbL1590Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhbL4158Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghhbL1537Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghhbL4040Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
achbL0139Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
hbhzR3855Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hbhzR3944Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
bzhbL1649Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzhbL4266Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
gkhbL0702Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gkhbL1698Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gtbhbL0870Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
gtbhbL1243Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
grbhbL1180Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
ghzhbL1552Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzhbL4056Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghthbL1600Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghthbL4179Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
adhbL1618Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adhbL4228Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
hbhgsR3252Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbhgsR3332Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hbtoR3266Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hbtoR3344Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdhbL1630Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhbL4255Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
fnhbL1236Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dthbL1062Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
hbhwR2600Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hbhwR2677Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
awhbL0126Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awhbL0133Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awhbL0917Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
hbtwR3865Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hbtwR3957Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hbuhR3226Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hbuhR3306Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dfihbL1518Gossypium aridum (D4) genome ISU_v1Gossypium aridum
gtihbL1339Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
drihbL0947Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
dqihbL1720Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
hbndmR3903Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hbndmR3995Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
barhbL1536Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
barhbL4043Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
adbhbL0844Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhbL1549Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhbL3661Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
adbhbL4036Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
hbjmbR3853Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hbjmbR3941Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hbpscR3733Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hbpscR3806Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyhbL1604Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhbL4229Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hbhpfR3595Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hbhpfR3678Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
rna-gnl|WGS_VKGI|Godar.D03G130600.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
TURN.02g041680.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
rna-gnl|WGS:VKDL|Gobar.A03G086700.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Gbar_A03G008630.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Gbscaffold4386.4.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
rna-gnl|WGS:JABEZZ|Gorai_00031415-RAGossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
gene-E1A91_D03G115200v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Gorai.003G106000.1Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
GB_D03G1173Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gothu.00043316-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
Ghe02G09410Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
rna-gnl|WGS_VKGI|Godar.A03G095500.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
Cotton_D_gene_10034939Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
GB_A03G0884Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
rna-gnl|WGS:JABFAA|Goari_00036080-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
Kirkii_Juiced.00g043950.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
rna-gnl|WGS:JABEZX|Golob_00036277-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
Gbar_D03G010530.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
rna-gnl|WGS_VKGE|Gotom.D03G127100.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
EVM0008270.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS:VKDL|Gobar.D03G120800.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Gar01G21000Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
gene-E1A91_A03G091100v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
mikado.F02G3284.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
mikado.D5.v1_2G3188.1Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
rna-gnl|WGS_VKGE|Gotom.A03G095700.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
mk-Dt_03_Mikado_40.378-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GH_A03G0883Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Ghicr24_A03G090600.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
GH_D03G1149Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GH_D03G01197_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gohir.A03G074200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GhirPA0301T086600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
maker-Dt_03-Msloci-g-40.378-mRNA-1Gossypium hirsutum (AD1) 'Bar32' genome NSF_v1Gossypium hirsutum
GH_A03G00919_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Ghi_A03G04616Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Ghicr24_D03G111900.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
Gohir.D03G100500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Ghir_D03G011110.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
Ghir_A03G008620.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
GhM_D03G1223.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
Gohir.A03G074200.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gh_A03G0654Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gh_D03G0950Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
D03G12140.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
Gh_D03G114900.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
A03G09540.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
CotAD_01911Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Ghi_D03G06221Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
maker-Dt_03_GB713_Mikado_sloci-g-40.21-mRNA-1Gossypium hirsutum (AD1) 'B713' genome NSF_v1Gossypium hirsutum
Gohir.D03G100500.2Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CotAD_65531_BGI-AD1_v1.0-CDS-At_chr12_BGI-AD1_v1.0-1448072452:61570972..61571349CotAD_65531_BGI-AD1_v1.0-CDS-At_chr12_BGI-AD1_v1.0-1448072452:61570972..61571349Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CotAD_65531CotAD_65531_BGI-AD1_v1.0-proteinGossypium hirsutumpolypeptide
CotAD_65531_BGI-AD1_v1.0CotAD_65531_BGI-AD1_v1.0Gossypium hirsutumpolypeptide


Homology
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1050555215|ref|XP_017620757.1| (PREDICTED: uncharacterized protein LOC108464977 [Gossypium arboreum])

HSP 1 Score: 253.062 bits (645), Expect = 7.070e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV
Sbjct:   22 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 146
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1029005582|ref|XP_016666684.1| (PREDICTED: uncharacterized protein LOC107887063 [Gossypium hirsutum] >gi|1347719384|gb|PPS15661.1| hypothetical protein GOBAR_AA04920 [Gossypium barbadense])

HSP 1 Score: 252.292 bits (643), Expect = 9.597e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV
Sbjct:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|823142183|ref|XP_012470894.1| (PREDICTED: uncharacterized protein LOC105788514 [Gossypium raimondii] >gi|1029123152|ref|XP_016739986.1| PREDICTED: uncharacterized protein LOC107949743 [Gossypium hirsutum] >gi|763752106|gb|KJB19494.1| hypothetical protein B456_003G106000 [Gossypium raimondii])

HSP 1 Score: 211.846 bits (538), Expect = 1.996e-68
Identity = 120/125 (96.00%), Postives = 120/125 (96.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLT LAVVSCVVGRICVRRRTKG AVVAITPLDTIKHG WLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQ  NETHPHPPPV
Sbjct:   22 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTFLAVVSCVVGRICVRRRTKGAAVVAITPLDTIKHGGWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQNNNETHPHPPPV 146
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1344097863|gb|PPD72768.1| (hypothetical protein GOBAR_DD30330 [Gossypium barbadense])

HSP 1 Score: 206.453 bits (524), Expect = 1.085e-66
Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFA+ISVLT LAVVSCVVGRICVRRRTKG AVVAITPLDTIKHG WLGWLKL CGGCMAGEVVEAGAKVMSFGEDQ  NETHPHPPPV
Sbjct:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAIISVLTFLAVVSCVVGRICVRRRTKGAAVVAITPLDTIKHGGWLGWLKLWCGGCMAGEVVEAGAKVMSFGEDQNNNETHPHPPPV 125
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1269973575|ref|XP_022737348.1| (uncharacterized protein LOC111290315 [Durio zibethinus])

HSP 1 Score: 122.479 bits (306), Expect = 3.205e-33
Identity = 79/129 (61.24%), Postives = 93/129 (72.09%), Query Frame = 0 
Query:    1 MASSISSLPL-----QGDTASSQAAAVGSSTTSSPSS---GSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPH 121
            M S+IS+LP      QGD  SSQAAA  ++T +S SS   GS+GPFFAVISVLT+LA+VSCVVGRIC+RRRT     V +TPLDTIK G  LGWLK +C  CMAGE +E GAKVMSFG+D+  N   P 
Sbjct:    1 MESAISTLPQVQGQQQGDIGSSQAAAAAAATAASSSSSSSGSIGPFFAVISVLTVLAIVSCVVGRICIRRRT----AVPVTPLDTIKDGGCLGWLKRKCRHCMAGE-MEVGAKVMSFGDDKNNNAHRPQ 124
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|508774993|gb|EOY22249.1| (Uncharacterized protein TCM_014473 [Theobroma cacao])

HSP 1 Score: 118.627 bits (296), Expect = 5.178e-32
Identity = 75/128 (58.59%), Postives = 88/128 (68.75%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQ---AAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            M S+ISSLP            +    ++++SS S+GS+GPFFAVIS+LT LA+VSCVVGRICVRRRT       +TPLDTIKHG  LGWLK +C  CMAGE VE GAKVMSFGE +T N  H H P V
Sbjct:    1 MESAISSLPQGQQQQQGDIGSSQGAAAASSSSSSAGSIGPFFAVISILTFLAIVSCVVGRICVRRRTAA----PVTPLDTIKHGSCLGWLKRKCRHCMAGE-VEVGAKVMSFGE-ETNN--HAHSPEV 120
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1063476185|ref|XP_007037748.2| (PREDICTED: uncharacterized protein LOC18604961 [Theobroma cacao])

HSP 1 Score: 117.857 bits (294), Expect = 9.140e-32
Identity = 82/130 (63.08%), Postives = 95/130 (73.08%), Query Frame = 0 
Query:    1 MASSISSLPLQ-----GDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            M S+ISSLP +     GD  SSQ AA  ++++SS S+GS+GPFFAVIS+LT LA+VSCVVGRICVRRRT       +TPLDTIKHG  LGWLK +C  CMAGE VE GAKVMSFGE +T N  H H P V
Sbjct:    1 MESAISSLPQRQQQQQGDIGSSQGAA--AASSSSSSAGSIGPFFAVISILTFLAIVSCVVGRICVRRRTAA----PVTPLDTIKHGGCLGWLKRKCRHCMAGE-VEVGAKVMSFGE-ETNN--HAHSPEV 120
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1137235904|gb|OMO97878.1| (hypothetical protein CCACVL1_04421 [Corchorus capsularis])

HSP 1 Score: 116.701 bits (291), Expect = 2.721e-31
Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            M S+I+SLP        Q     + ++ S SSGS+GPFFAVISVL  LA+ SCV+GRIC+RRR +    V +TPLDTIKHG  LGWLKL+C  CMAGE VE GAKVMS  ED  K    PHPP V
Sbjct:    1 MESAITSLP------QQQQQGQQAGSSGSSSSGSIGPFFAVISVLAFLAIASCVLGRICMRRRLRA---VPVTPLDTIKHGGCLGWLKLKCRHCMAGE-VEVGAKVMSCNEDN-KASNEPHPPQV 114
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|1204907754|ref|XP_021286260.1| (uncharacterized protein LOC110417973 [Herrania umbratica])

HSP 1 Score: 115.931 bits (289), Expect = 5.749e-31
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 0 
Query:   37 PFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHP 120
            PFFAVIS+LT LA+VSCVVGRICVRRRT       +TPLDTIKHG  LGWLK +C  CMAGE VE GAKVMSFGE+   +  HP
Sbjct:   42 PFFAVISILTFLAIVSCVVGRICVRRRTAA----PVTPLDTIKHGGCLGWLKRKCQHCMAGE-VEVGAKVMSFGEETNNHAHHP 120
[Close]
BLAST of CotAD_65531 vs. NCBI nr
Match: gi|985472473|ref|XP_015381507.1| (PREDICTED: uncharacterized protein LOC107174829 [Citrus sinensis])

HSP 1 Score: 103.99 bits (258), Expect = 4.379e-26
Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 0 
Query:   12 GDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSF-------GEDQTKNETHPHPPP 124
            G+  +S + AV    + S SSGS+GPFFAV+S+L +LA++SCV+GRIC RRR +   ++  +PLD+IK+   LGWLK RC  CM GE VEAGAKVM+          ++ K+ T    PP
Sbjct:   16 GEVEASNSEAV----SRSASSGSVGPFFAVMSILLVLAIISCVLGRICSRRRGR---IIVESPLDSIKYRGCLGWLKRRCRRCMDGE-VEAGAKVMACVDYRNNDDNNKAKDGTQVQDPP 127
[Close]
BLAST of CotAD_65531 vs. Cacao Genome Database
Match: pacid=27448172 (transcript=Thecc1EG014473t1 locus=Thecc1EG014473 ID=Thecc1EG014473t1.CGDv1.1 annot-version=v1.1)

HSP 1 Score: 112.849 bits (281), Expect = 5.674e-26
Identity = 62/89 (69.66%), Postives = 67/89 (75.28%), Query Frame = 1 
Query:   37 PFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            PFFAVIS+LT LA+VSCVVGRICVRRRT       +TPLDTIKHG  LGWLK +C  CMAGE VE GAKVMSFGE +T N  H H P V
Sbjct:   40 PFFAVISILTFLAIVSCVVGRICVRRRTAA----PVTPLDTIKHGSCLGWLKRKCRHCMAGE-VEVGAKVMSFGE-ETNN--HAHSPEV 120
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A2P5YJB8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA04920 PE=4 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 8.062e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV
Sbjct:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A1U8HTK1_GOSHI (uncharacterized protein LOC107887063 OS=Gossypium hirsutum OX=3635 GN=LOC107887063 PE=4 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 8.062e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV
Sbjct:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A0D2QIH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G106000 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.677e-68
Identity = 120/125 (96.00%), Postives = 120/125 (96.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLT LAVVSCVVGRICVRRRTKG AVVAITPLDTIKHG WLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQ  NETHPHPPPV
Sbjct:   22 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTFLAVVSCVVGRICVRRRTKGAAVVAITPLDTIKHGGWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQNNNETHPHPPPV 146
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A1U8NLU7_GOSHI (uncharacterized protein LOC107949743 OS=Gossypium hirsutum OX=3635 GN=LOC107949743 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.677e-68
Identity = 120/125 (96.00%), Postives = 120/125 (96.00%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLT LAVVSCVVGRICVRRRTKG AVVAITPLDTIKHG WLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQ  NETHPHPPPV
Sbjct:   22 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTFLAVVSCVVGRICVRRRTKGAAVVAITPLDTIKHGGWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQNNNETHPHPPPV 146
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A2P5QE03_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD30330 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.115e-67
Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFA+ISVLT LAVVSCVVGRICVRRRTKG AVVAITPLDTIKHG WLGWLKL CGGCMAGEVVEAGAKVMSFGEDQ  NETHPHPPPV
Sbjct:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAIISVLTFLAVVSCVVGRICVRRRTKGAAVVAITPLDTIKHGGWLGWLKLWCGGCMAGEVVEAGAKVMSFGEDQNNNETHPHPPPV 125
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A061G5F6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014473 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.350e-32
Identity = 75/128 (58.59%), Postives = 88/128 (68.75%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQ---AAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            M S+ISSLP            +    ++++SS S+GS+GPFFAVIS+LT LA+VSCVVGRICVRRRT       +TPLDTIKHG  LGWLK +C  CMAGE VE GAKVMSFGE +T N  H H P V
Sbjct:    1 MESAISSLPQGQQQQQGDIGSSQGAAAASSSSSSAGSIGPFFAVISILTFLAIVSCVVGRICVRRRTAA----PVTPLDTIKHGSCLGWLKRKCRHCMAGE-VEVGAKVMSFGE-ETNN--HAHSPEV 120
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A1R3JSQ6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04421 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.286e-31
Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:    1 MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNETHPHPPPV 125
            M S+I+SLP        Q     + ++ S SSGS+GPFFAVISVL  LA+ SCV+GRIC+RRR +    V +TPLDTIKHG  LGWLKL+C  CMAGE VE GAKVMS  ED  K    PHPP V
Sbjct:    1 MESAITSLP------QQQQQGQQAGSSGSSSSGSIGPFFAVISVLAFLAIASCVLGRICMRRRLRA---VPVTPLDTIKHGGCLGWLKLKCRHCMAGE-VEVGAKVMSCNEDN-KASNEPHPPQV 114
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A067FE01_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033010mg PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.320e-25
Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 0 
Query:   12 GDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMS-------FGEDQTKNETHPHPPP 124
            G+  +S + AV    + S SSGS+GPFFAV+S+L +LA++SCV+GRIC RRR +   ++  +PLD+IK+   LGWLK RC  CM GE VEAGAKVM+          ++ K+ T    PP
Sbjct:   16 GEVEASNSEAV----SRSASSGSVGPFFAVMSILLVLAIISCVLGRICSRRRGR---IIVESPLDSIKYRGCLGWLKRRCRRCMDGE-VEAGAKVMACVDDRNNDDNNKAKDGTQVQDPP 127
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: A0A2H5N5T7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_278560 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.320e-25
Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 0 
Query:   12 GDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMS-------FGEDQTKNETHPHPPP 124
            G+  +S + AV    + S SSGS+GPFFAV+S+L +LA++SCV+GRIC RRR +   ++  +PLD+IK+   LGWLK RC  CM GE VEAGAKVM+          ++ K+ T    PP
Sbjct:   16 GEVEASNSEAV----SRSASSGSVGPFFAVMSILLVLAIISCVLGRICSRRRGR---IIVESPLDSIKYRGCLGWLKRRCRRCMDGE-VEAGAKVMACVDDRNNDDNNKAKDGTQVQDPP 127
[Close]
BLAST of CotAD_65531 vs. ExPASy TrEMBL
Match: V4T1R5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10024471mg PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.943e-25
Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 0 
Query:   12 GDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMS-------FGEDQTKNETHPHPPP 124
            G+  +S + AV    + S SSGS+GPFFAV+S+L +LA++SCV+GRIC RRR +   ++  +PLD+IK+   LGWLK RC  CM GE VEAGAKVM+          ++ K+ T    PP
Sbjct:   16 GEVEASNSEAV----SRSASSGSVGPFFAVMSILLVLAIISCVLGRICSRRRGR---IIVESPLDSIKYRGCLGWLKRRCRPCMDGE-VEAGAKVMACVDDRNNDDNNKAKDGTQVQDPP 127
[Close]
BLAST of CotAD_65531 vs. Araport11
Match: gnl|BL_ORD_ID|11351 (AT1G74055.1 | transmembrane protein | Chr1:27849279-27849713 FORWARD LENGTH=144 | 201606)

HSP 1 Score: 88.1965 bits (217), Expect = 3.919e-23
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0 
Query:   31 SSGSLGPFFAVISVLTILAVVSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVVEAGAKVMSFGEDQTKNET 118
            SS S+GPFFAVISVL ILAV+SC +GR C R R +   V  + PL+ IK G  LGWL+ +   C+AG+ VEAGAKV      +T  + 
Sbjct:   48 SSSSIGPFFAVISVLIILAVLSCFLGRFCARSRQRTGLVAEVNPLEMIKSGGLLGWLRRKWRRCLAGD-VEAGAKVADCASKETPKDN 134
The following BLAST results are available for this feature:
BLAST of CotAD_65531 vs. NCBI nr
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1050555215|ref|XP_017620757.1|7.070e-85100.00PREDICTED: uncharacterized protein LOC108464977 [G... [more]
gi|1029005582|ref|XP_016666684.1|9.597e-85100.00PREDICTED: uncharacterized protein LOC107887063 [G... [more]
gi|823142183|ref|XP_012470894.1|1.996e-6896.00PREDICTED: uncharacterized protein LOC105788514 [G... [more]
gi|1344097863|gb|PPD72768.1|1.085e-6694.40hypothetical protein GOBAR_DD30330 [Gossypium barb... [more]
gi|1269973575|ref|XP_022737348.1|3.205e-3361.24uncharacterized protein LOC111290315 [Durio zibeth... [more]
gi|508774993|gb|EOY22249.1|5.178e-3258.59Uncharacterized protein TCM_014473 [Theobroma caca... [more]
gi|1063476185|ref|XP_007037748.2|9.140e-3263.08PREDICTED: uncharacterized protein LOC18604961 [Th... [more]
gi|1137235904|gb|OMO97878.1|2.721e-3157.60hypothetical protein CCACVL1_04421 [Corchorus caps... [more]
gi|1204907754|ref|XP_021286260.1|5.749e-3169.05uncharacterized protein LOC110417973 [Herrania umb... [more]
gi|985472473|ref|XP_015381507.1|4.379e-2647.50PREDICTED: uncharacterized protein LOC107174829 [C... [more]
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BLAST of CotAD_65531 vs. Cacao Genome Database
Analysis Date: 2015-11-24 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Cacao)
Total hits: 1
Match NameE-valueIdentityDescription
pacid=274481725.674e-2669.66transcript=Thecc1EG014473t1 locus=Thecc1EG014473 I... [more]
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BLAST of CotAD_65531 vs. ExPASy TrEMBL
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2P5YJB8_GOSBA8.062e-85100.00Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A1U8HTK1_GOSHI8.062e-85100.00uncharacterized protein LOC107887063 OS=Gossypium ... [more]
A0A0D2QIH5_GOSRA1.677e-6896.00Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8NLU7_GOSHI1.677e-6896.00uncharacterized protein LOC107949743 OS=Gossypium ... [more]
A0A2P5QE03_GOSBA9.115e-6794.40Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A061G5F6_THECC4.350e-3258.59Uncharacterized protein OS=Theobroma cacao OX=3641... [more]
A0A1R3JSQ6_COCAP2.286e-3157.60Uncharacterized protein OS=Corchorus capsularis OX... [more]
A0A067FE01_CITSI3.320e-2547.50Uncharacterized protein OS=Citrus sinensis OX=2711... [more]
A0A2H5N5T7_CITUN3.320e-2547.50Uncharacterized protein OS=Citrus unshiu OX=55188 ... [more]
V4T1R5_9ROSI8.943e-2547.50Uncharacterized protein OS=Citrus clementina OX=85... [more]
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BLAST of CotAD_65531 vs. Araport11
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|113513.919e-2351.14AT1G74055.1 | transmembrane protein | Chr1:2784927... [more]
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BLAST of CotAD_65531 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot Swiss-Prot)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>CotAD_65531_BGI-AD1_v1.0 ID=CotAD_65531_BGI-AD1_v1.0; Name=CotAD_65531; organism=Gossypium hirsutum; type=mRNA; length=378bp
ATGGCATCTTCTATTTCATCATTACCACTTCAAGGAGACACCGCAAGCAG
CCAAGCAGCAGCAGTGGGAAGCAGTACTACTTCGTCACCGTCGTCAGGGT
CTCTAGGGCCATTCTTCGCCGTCATCTCAGTTCTGACTATTCTAGCTGTT
GTTTCTTGTGTGGTGGGAAGGATTTGTGTCCGACGTCGGACGAAGGGGGA
GGCGGTAGTGGCCATAACGCCATTGGATACGATAAAGCATGGAGATTGGT
TGGGATGGTTGAAGCTAAGGTGTGGAGGTTGTATGGCGGGGGAGGTGGTG
GAGGCGGGTGCCAAAGTTATGTCTTTTGGTGAGGATCAAACTAAAAATGA
AACCCATCCCCATCCACCTCCAGTTTGA
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protein sequence of CotAD_65531_BGI-AD1_v1.0

>CotAD_65531_BGI-AD1_v1.0 ID=CotAD_65531_BGI-AD1_v1.0; Name=CotAD_65531_BGI-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=125bp
MASSISSLPLQGDTASSQAAAVGSSTTSSPSSGSLGPFFAVISVLTILAV
VSCVVGRICVRRRTKGEAVVAITPLDTIKHGDWLGWLKLRCGGCMAGEVV
EAGAKVMSFGEDQTKNETHPHPPPV
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mRNA from alignment at At_chr12:61570972..61571349-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CotAD_65531_BGI-AD1_v1.0 ID=CotAD_65531_BGI-AD1_v1.0; Name=CotAD_65531; organism=Gossypium hirsutum; type=mRNA; length=378bp; location=Sequence derived from: At_chr12:61570972..61571349- (Gossypium hirsutum
ATGGCATCTTCTATTTCATCATTACCACTTCAAGGAGACACCGCAAGCAG
CCAAGCAGCAGCAGTGGGAAGCAGTACTACTTCGTCACCGTCGTCAGGGT
CTCTAGGGCCATTCTTCGCCGTCATCTCAGTTCTGACTATTCTAGCTGTT
GTTTCTTGTGTGGTGGGAAGGATTTGTGTCCGACGTCGGACGAAGGGGGA
GGCGGTAGTGGCCATAACGCCATTGGATACGATAAAGCATGGAGATTGGT
TGGGATGGTTGAAGCTAAGGTGTGGAGGTTGTATGGCGGGGGAGGTGGTG
GAGGCGGGTGCCAAAGTTATGTCTTTTGGTGAGGATCAAACTAAAAATGA
AACCCATCCCCATCCACCTCCAGTTTGA
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Coding sequence (CDS) from alignment at At_chr12:61570972..61571349-

>CotAD_65531_BGI-AD1_v1.0 ID=CotAD_65531_BGI-AD1_v1.0; Name=CotAD_65531; organism=Gossypium hirsutum; type=CDS; length=378bp; location=Sequence derived from: At_chr12:61570972..61571349- (Gossypium hirsutum
ATGGCATCTTCTATTTCATCATTACCACTTCAAGGAGACACCGCAAGCAG
CCAAGCAGCAGCAGTGGGAAGCAGTACTACTTCGTCACCGTCGTCAGGGT
CTCTAGGGCCATTCTTCGCCGTCATCTCAGTTCTGACTATTCTAGCTGTT
GTTTCTTGTGTGGTGGGAAGGATTTGTGTCCGACGTCGGACGAAGGGGGA
GGCGGTAGTGGCCATAACGCCATTGGATACGATAAAGCATGGAGATTGGT
TGGGATGGTTGAAGCTAAGGTGTGGAGGTTGTATGGCGGGGGAGGTGGTG
GAGGCGGGTGCCAAAGTTATGTCTTTTGGTGAGGATCAAACTAAAAATGA
AACCCATCCCCATCCACCTCCAGTTTGA
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