Cotton_D_gene_10032634, Cotton_D_gene_10032634 (mRNA) Gossypium raimondii
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Cotton_D_gene_10032634 vs. Malus x Domestica v1.0
Match: MDP0000288520 (MDP0000288520) HSP 1 Score: 293.893 bits (751), Expect = 2.663e-80 Identity = 137/140 (97.86%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 315 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 454
BLAST of Cotton_D_gene_10032634 vs. Malus x Domestica v1.0
Match: MDP0000517303 (MDP0000517303) HSP 1 Score: 265.003 bits (676), Expect = 1.336e-71 Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 1
Query: 2 GRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
GR KGISASALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 96 GRRVVDTKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 234
BLAST of Cotton_D_gene_10032634 vs. Malus x Domestica v1.0
Match: MDP0000262752 (MDP0000262752) HSP 1 Score: 233.802 bits (595), Expect = 3.833e-62 Identity = 111/126 (88.10%), Postives = 123/126 (97.62%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLA 126
MGRMHS GKG+SASALPYKR+ PSWLK+++ DVE+NICKFAKKG+TPSQIGVILRDSHGIAQVK+VTGSKILR+LKA+GLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+
Sbjct: 1 MGRMHSHGKGMSASALPYKRSAPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKTVTGSKILRVLKAYGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLS 126
BLAST of Cotton_D_gene_10032634 vs. Malus x Domestica v1.0
Match: MDP0000753788 (MDP0000753788) HSP 1 Score: 216.468 bits (550), Expect = 5.359e-57 Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 1
Query: 29 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
+ Q VE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 442 AQQRVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 553
BLAST of Cotton_D_gene_10032634 vs. Vitis vinifera
Match: GSVIVT01027637001 (assembled CDS) HSP 1 Score: 280.026 bits (715), Expect = 1.773e-76 Identity = 136/140 (97.14%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWK
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Vitis vinifera
Match: GSVIVT01018537001 (assembled CDS) HSP 1 Score: 277.33 bits (708), Expect = 1.346e-75 Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGIS+SALPYKRTPP+WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRL RYYK+TKKLPPVWK
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Prunus Persica v1.0
Match: ppa012862m () HSP 1 Score: 281.182 bits (718), Expect = 1.114e-76 Identity = 137/140 (97.86%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Prunus Persica v1.0
Match: ppa012878m () HSP 1 Score: 280.026 bits (715), Expect = 2.100e-76 Identity = 136/140 (97.14%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Prunus Persica v1.0
Match: ppa012880m () HSP 1 Score: 266.929 bits (681), Expect = 2.085e-72 Identity = 128/140 (91.43%), Postives = 137/140 (97.86%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHS GKG+SASALPYKR+ PSWLK+++ DVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWK
Sbjct: 1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Prunus Persica v1.0
Match: ppa022082m () HSP 1 Score: 125.946 bits (315), Expect = 5.026e-30 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1
Query: 68 GSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
G+ I + GLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWK
Sbjct: 5 GNAIFSFM--FGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWK 75
BLAST of Cotton_D_gene_10032634 vs. TAIR10
Match: AT4G00100.1 (| ribosomal protein S13A | Chr4:37172-38123 FORWARD LENGTH=151 | 201606) HSP 1 Score: 270.396 bits (690), Expect = 1.067e-94 Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKR+ PSWLK +SQDV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. TAIR10
Match: AT3G60770.1 (| Ribosomal protein S13/S15 | Chr3:22460525-22461656 REVERSE LENGTH=151 | 201606) HSP 1 Score: 267.7 bits (683), Expect = 1.167e-93 Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKR+ PSWLK + QDV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Populus trichicarpa v2.0
Match: POPTR_0015s14490.1 () HSP 1 Score: 277.715 bits (709), Expect = 1.636e-75 Identity = 135/140 (96.43%), Postives = 139/140 (99.29%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHS GKGISASALPYKRTPPSWLKIS+QDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Populus trichicarpa v2.0
Match: POPTR_0002s14780.1 () HSP 1 Score: 276.174 bits (705), Expect = 5.130e-75 Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHS+GKGISASALPYKRTPPSWLKIS QDV+DNICKFAKKGLTPSQIGVILRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSKGKGISASALPYKRTPPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Populus trichicarpa v2.0
Match: POPTR_0014s06420.1 () HSP 1 Score: 273.478 bits (698), Expect = 3.085e-74 Identity = 133/140 (95.00%), Postives = 138/140 (98.57%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHS+GKGISASALPYKRT PSWLKIS QDV+DNICKFAKKGLTPSQIGVILRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSKGKGISASALPYKRTSPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKTVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. Populus trichicarpa v2.0
Match: POPTR_0012s14440.1 () HSP 1 Score: 271.937 bits (694), Expect = 9.594e-74 Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 1
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRT PSWLKIS+QDV+D+ICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKL PVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTSPSWLKISAQDVDDSICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLAPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A067FDB2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031857mg PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.752e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A0D2P5S8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G090600 PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.752e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A2G9GPK4_9LAMI (40S ribosomal protein S13 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20292 PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.752e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A2H5NMM4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_058810 PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.752e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: V4RLB2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006145mg PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.752e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A1Q3CEH9_CEPFO (Ribosomal_S15 domain-containing protein/Ribosomal_S13_N domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22111 PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.589e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A2P5W5E9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34397 PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.589e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A061DU45_THECC (Ribosomal protein S13A OS=Theobroma cacao OX=3641 GN=TCM_005525 PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.589e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A0D2Q058_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G174200 PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.589e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Match: A0A0B0MHR3_GOSAR (40S ribosomal S13 OS=Gossypium arboreum OX=29729 GN=F383_19582 PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.589e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|567858120|ref|XP_006421743.1| (40S ribosomal protein S13 [Citrus clementina] >gi|567905572|ref|XP_006445274.1| 40S ribosomal protein S13 [Citrus clementina] >gi|568874272|ref|XP_006490240.1| PREDICTED: 40S ribosomal protein S13 [Citrus sinensis] >gi|568875664|ref|XP_006490912.1| PREDICTED: 40S ribosomal protein S13 [Citrus sinensis] >gi|823186155|ref|XP_012489762.1| PREDICTED: 40S ribosomal protein S13 isoform X1 [Gossypium raimondii] >gi|1050589610|ref|XP_017616110.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >gi|1216944712|ref|XP_021668549.1| 40S ribosomal protein S13 [Hevea brasiliensis] >gi|1269867185|ref|XP_022765760.1| 40S ribosomal protein S13-like [Durio zibethinus] >gi|557523616|gb|ESR34983.1| hypothetical protein CICLE_v10006145mg [Citrus clementina] >gi|557547536|gb|ESR58514.1| hypothetical protein CICLE_v10022677mg [Citrus clementina] >gi|641846516|gb|KDO65399.1| hypothetical protein CISIN_1g031857mg [Citrus sinensis] >gi|763773979|gb|KJB41102.1| hypothetical protein B456_007G090600 [Gossypium raimondii] >gi|1276247582|gb|PIN07142.1| 40S ribosomal protein S13 [Handroanthus impetiginosus] >gi|1315966688|dbj|GAY41352.1| hypothetical protein CUMW_058810 [Citrus unshiu]) HSP 1 Score: 284.648 bits (727), Expect = 5.657e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|590671851|ref|XP_007038446.1| (PREDICTED: 40S ribosomal protein S13 [Theobroma cacao] >gi|590723042|ref|XP_007052073.1| PREDICTED: 40S ribosomal protein S13 [Theobroma cacao] >gi|747044746|ref|XP_011090599.1| 40S ribosomal protein S13 [Sesamum indicum] >gi|747091271|ref|XP_011093360.1| 40S ribosomal protein S13 [Sesamum indicum] >gi|823125124|ref|XP_012482991.1| PREDICTED: 40S ribosomal protein S13 [Gossypium raimondii] >gi|823150893|ref|XP_012475276.1| PREDICTED: 40S ribosomal protein S13 [Gossypium raimondii] >gi|823214991|ref|XP_012440259.1| PREDICTED: 40S ribosomal protein S13 [Gossypium raimondii] >gi|1029130615|ref|XP_016743592.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium hirsutum] >gi|1029135059|ref|XP_016745661.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium hirsutum] >gi|1050557569|ref|XP_017627423.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >gi|1050602887|ref|XP_017623880.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >gi|1204897020|ref|XP_021280474.1| 40S ribosomal protein S13 [Herrania umbratica] >gi|1204906813|ref|XP_021285749.1| 40S ribosomal protein S13 [Herrania umbratica] >gi|1269892468|ref|XP_022757076.1| 40S ribosomal protein S13 [Durio zibethinus] >gi|1269892472|ref|XP_022757078.1| 40S ribosomal protein S13 [Durio zibethinus] >gi|1269915863|ref|XP_022769679.1| 40S ribosomal protein S13 [Durio zibethinus] >gi|508704334|gb|EOX96230.1| Ribosomal protein S13A [Theobroma cacao] >gi|508775691|gb|EOY22947.1| Ribosomal protein S13A [Theobroma cacao] >gi|728810504|gb|KHF99664.1| 40S ribosomal S13 [Gossypium arboreum] >gi|728811575|gb|KHG00285.1| 40S ribosomal S13 [Gossypium arboreum] >gi|763742407|gb|KJB09906.1| hypothetical protein B456_001G174200 [Gossypium raimondii] >gi|763756909|gb|KJB24240.1| hypothetical protein B456_004G162400 [Gossypium raimondii] >gi|763785867|gb|KJB52938.1| hypothetical protein B456_008G284100 [Gossypium raimondii] >gi|1130840035|dbj|GAV78646.1| Ribosomal_S15 domain-containing protein/Ribosomal_S13_N domain-containing protein [Cephalotus follicularis] >gi|1276240739|gb|PIN02142.1| 40S ribosomal protein S13 [Handroanthus impetiginosus] >gi|1276253588|gb|PIN11802.1| 40S ribosomal protein S13 [Handroanthus impetiginosus] >gi|1347683367|gb|PPR86288.1| hypothetical protein GOBAR_AA34397 [Gossypium barbadense]) HSP 1 Score: 283.493 bits (724), Expect = 1.892e-96 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|1028974791|ref|XP_016730845.1| (PREDICTED: 40S ribosomal protein S13-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 283.108 bits (723), Expect = 2.182e-96 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESR HRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRTHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|823186158|ref|XP_012489763.1| (PREDICTED: 40S ribosomal protein S13 isoform X2 [Gossypium raimondii] >gi|557523615|gb|ESR34982.1| hypothetical protein CICLE_v10006145mg [Citrus clementina] >gi|641846517|gb|KDO65400.1| hypothetical protein CISIN_1g031857mg [Citrus sinensis] >gi|728850716|gb|KHG30159.1| 40S ribosomal S13 [Gossypium arboreum] >gi|763773980|gb|KJB41103.1| hypothetical protein B456_007G090600 [Gossypium raimondii] >gi|763773981|gb|KJB41104.1| hypothetical protein B456_007G090600 [Gossypium raimondii] >gi|763773982|gb|KJB41105.1| hypothetical protein B456_007G090600 [Gossypium raimondii] >gi|1315966689|dbj|GAY41353.1| hypothetical protein CUMW_058810 [Citrus unshiu]) HSP 1 Score: 282.722 bits (722), Expect = 2.226e-96 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|1227947207|ref|XP_021909648.1| (40S ribosomal protein S13 [Carica papaya]) HSP 1 Score: 282.337 bits (721), Expect = 5.426e-96 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|1269873383|ref|XP_022735121.1| (40S ribosomal protein S13-like [Durio zibethinus]) HSP 1 Score: 281.952 bits (720), Expect = 5.607e-96 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|823176481|ref|XP_012486462.1| (PREDICTED: 40S ribosomal protein S13 [Gossypium raimondii] >gi|1028947830|ref|XP_016717229.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium hirsutum] >gi|1029014013|ref|XP_016670884.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium hirsutum] >gi|1050590841|ref|XP_017616763.1| PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >gi|728846076|gb|KHG25519.1| 40S ribosomal S13 [Gossypium arboreum] >gi|763770035|gb|KJB37250.1| hypothetical protein B456_006G195900 [Gossypium raimondii]) HSP 1 Score: 281.952 bits (720), Expect = 5.859e-96 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|1050602976|ref|XP_017623918.1| (PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >gi|728829609|gb|KHG09052.1| 40S ribosomal S13 [Gossypium arboreum] >gi|728830698|gb|KHG10141.1| 40S ribosomal S13 [Gossypium arboreum]) HSP 1 Score: 281.952 bits (720), Expect = 5.859e-96 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPY+RTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYRRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|702328061|ref|XP_010053902.1| (PREDICTED: 40S ribosomal protein S13 [Eucalyptus grandis] >gi|702421841|ref|XP_010066926.1| PREDICTED: 40S ribosomal protein S13 [Eucalyptus grandis] >gi|629113319|gb|KCW78279.1| hypothetical protein EUGRSUZ_D02462 [Eucalyptus grandis] >gi|1208524031|gb|OWM78585.1| hypothetical protein CDL15_Pgr002752 [Punica granatum] >gi|1305246010|gb|PKI59555.1| hypothetical protein CRG98_020083 [Punica granatum] >gi|1305255796|gb|PKI68621.1| hypothetical protein CRG98_011025 [Punica granatum] >gi|1338410540|gb|PON34614.1| Ribosomal protein [Parasponia andersonii]) HSP 1 Score: 281.952 bits (720), Expect = 5.923e-96 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Match: gi|1216962673|ref|XP_021677876.1| (40S ribosomal protein S13-like [Hevea brasiliensis]) HSP 1 Score: 281.952 bits (720), Expect = 6.684e-96 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKRTPPSWLKIS QDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRTPPSWLKISPQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.737e-97 Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.027e-93 Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKR+ PSWLK +SQDV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.123e-92 Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGISASALPYKR+ PSWLK + QDV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 2.672e-92 Identity = 130/140 (92.86%), Postives = 137/140 (97.86%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGR+HS+GKGIS+SALPY+RT PSWLKISSQDV++ ICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct: 1 MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117300 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.938e-85 Identity = 122/140 (87.14%), Postives = 128/140 (91.43%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGIS+SALPYKRTPPSWLK ++ DVE+ I K AKKG PSQIGV+LRD HGI VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WK
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS131_ORYSJ (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117200 PE=3 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 5.626e-84 Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMHSRGKGIS+SA+PYKRTPPSW+K ++ DVE+ I K AKKG PSQIGV+LRD HGI VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WK
Sbjct: 1 MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_MAIZE (40S ribosomal protein S13 OS=Zea mays OX=4577 GN=RPS13 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 1.543e-83 Identity = 120/140 (85.71%), Postives = 127/140 (90.71%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MG MHSRGKGIS+SALPYKRTPP+WLK ++ DVE+ I K AKKG PSQIGV+LRD HGI VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WK
Sbjct: 1 MGAMHSRGKGISSSALPYKRTPPTWLKTAASDVEEMITKAAKKGQMPSQIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_RAT (40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.599e-77 Identity = 108/140 (77.14%), Postives = 127/140 (90.71%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WK
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_MOUSE (40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.599e-77 Identity = 108/140 (77.14%), Postives = 127/140 (90.71%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WK
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWK 140
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Match: RS13_HUMAN (40S ribosomal protein S13 OS=Homo sapiens OX=9606 GN=RPS13 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.599e-77 Identity = 108/140 (77.14%), Postives = 127/140 (90.71%), Query Frame = 0
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WK
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWK 140 The following BLAST results are available for this feature:
BLAST of Cotton_D_gene_10032634 vs. Malus x Domestica v1.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Malus x domestica Genome v1.0) Total hits: 4
BLAST of Cotton_D_gene_10032634 vs. Vitis vinifera
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Vitis vinifera Genome v2.0) Total hits: 2
BLAST of Cotton_D_gene_10032634 vs. Prunus Persica v1.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Prunus persica Genome v1.0) Total hits: 4
BLAST of Cotton_D_gene_10032634 vs. TAIR10
Analysis Date: 2019-06-26 (BLASTx of BGI-CGP D genome v1.0 vs Araport11) Total hits: 2
BLAST of Cotton_D_gene_10032634 vs. Populus trichicarpa v2.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Populus Genome v2.0) Total hits: 4
BLAST of Cotton_D_gene_10032634 vs. ExPASy TrEMBL
Analysis Date: 2019-06-26 (BLASTx of BGI-CGP D genome v1.0 vs Uniprot TrEMBL) Total hits: 10
BLAST of Cotton_D_gene_10032634 vs. NCBI nr
Analysis Date: 2019-06-28 (BLASTx of BGI-CGP D genome v1.0 vs NCBI nr) Total hits: 10
BLAST of Cotton_D_gene_10032634 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-28 (BLASTx of BGI-CGP D genome v1.0 vs UniProt Swiss-Prot) Total hits: 10
InterPro
Analysis Name: InterProScan analysis of Gossypium raimondii D Genome v1.0 (BGI-CGP)
Date Performed: 2012-11-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cotton_D_gene_10032634-BGI-CGP_v1.0 ID=Cotton_D_gene_10032634-BGI-CGP_v1.0; Name=Cotton_D_gene_10032634; organism=Gossypium raimondii; type=mRNA; length=1300bpback to top mRNA from alignment at scaffold6:3641623..3642922+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Cotton_D_gene_10032634-BGI-CGP_v1.0 ID=Cotton_D_gene_10032634-BGI-CGP_v1.0; Name=Cotton_D_gene_10032634; organism=Gossypium raimondii; type=mRNA; length=1300bp; location=Sequence derived from: scaffold6:3641623..3642922+ (Gossypium raimondiiback to top Coding sequence (CDS) from alignment at scaffold6:3641623..3642922+ >Cotton_D_gene_10032634-BGI-CGP_v1.0 ID=Cotton_D_gene_10032634-BGI-CGP_v1.0; Name=Cotton_D_gene_10032634; organism=Gossypium raimondii; type=CDS; length=423bp; location=Sequence derived from: scaffold6:3641623..3642922+ (Gossypium raimondiiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|