Kocoo.012G090500.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Kocoo.012G090500.1 vs. Araport11
Match: AT2G18110.1 (| Symbols: no symbol available | no full name available | chr2:7872636-7873713 FORWARD LENGTH=231) HSP 1 Score: 144.436 bits (363), Expect = 1.190e-43 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0
Query: 5 FNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPPTADSKAT 99
F +L S +GLKKLDE+LLTRSYI+GYQASKDDIT++ ALS P+S +VNVSRW+ HIDALLRISGVS EG GV VEG +P EAVATPP ADSK T
Sbjct: 4 FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDT 100 HSP 2 Score: 106.301 bits (264), Expect = 9.022e-29 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +M TIVDDLVS+DT+IEEQLTVEPINEYVQSCDIVAFNKI
Sbjct: 177 ASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of Kocoo.012G090500.1 vs. Araport11
Match: AT1G30230.1 (| Symbols: EF1Bb, eEF-1Bb1 | eukaryotic elongation factor 1B beta 1, elongation factor 1B beta | chr1:10639286-10640515 FORWARD LENGTH=231) HSP 1 Score: 139.043 bits (349), Expect = 1.444e-41 Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 0
Query: 5 FNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPP 92
F +L S AGLKKLDE+LLTRSYI+GYQASKDDIT++AAL+ P+S YVN SRWY HIDALLRISGVS EG GV VEG AP EAVATPP
Sbjct: 4 FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPP 93 HSP 2 Score: 106.301 bits (264), Expect = 9.518e-29 Identity = 49/55 (89.09%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ++ TIVDDLVS+DT+IEEQLTVEPINEYVQSCDIVAFNKI
Sbjct: 177 ASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of Kocoo.012G090500.1 vs. Araport11
Match: AT1G30230.2 (| Symbols: EF1Bb, eEF-1Bb1 | eukaryotic elongation factor 1B beta 1, elongation factor 1B beta | chr1:10639286-10640601 FORWARD LENGTH=260) HSP 1 Score: 138.658 bits (348), Expect = 3.915e-41 Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 0
Query: 5 FNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPP 92
F +L S AGLKKLDE+LLTRSYI+GYQASKDDIT++AAL+ P+S YVN SRWY HIDALLRISGVS EG GV VEG AP EAVATPP
Sbjct: 4 FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPP 93 HSP 2 Score: 111.309 bits (277), Expect = 1.623e-30 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKICK 154
A+KLVPVGYGIKKLQ++ TIVDDLVS+DT+IEEQLTVEPINEYVQSCDIVAFNKICK
Sbjct: 177 ASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKICK 233
BLAST of Kocoo.012G090500.1 vs. Araport11
Match: AT5G12110.1 (| Symbols: no symbol available | no full name available | chr5:3914483-3915732 FORWARD LENGTH=228) HSP 1 Score: 95.5153 bits (236), Expect = 9.817e-25 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +MMTIVDDLVSVD LIE+ LT EP NEY+QS DIVAFNKI
Sbjct: 174 ASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228 HSP 2 Score: 66.6254 bits (161), Expect = 8.237e-14 Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKA 98
MAVTF+DL + GLK L+E+L ++YISG Q S DD+ +YAA+ P + N S+WY + + L S + GV V G + A P T + A
Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKS-FPGKADGVRVGGGVAPPSEAHPHTEEPAA 97
BLAST of Kocoo.012G090500.1 vs. Araport11
Match: AT5G19510.1 (| Symbols: no symbol available | no full name available | chr5:6581854-6583137 REVERSE LENGTH=224) HSP 1 Score: 92.0485 bits (227), Expect = 2.102e-23 Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +M TIVDDLVS D LIE+ LT EP NEY+QSCDIVAFNKI
Sbjct: 170 ASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224 HSP 2 Score: 65.855 bits (159), Expect = 1.725e-13 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRIS 68
MAVTF+DL + G+K ++E+L ++YISG Q S DD+ +YAA+ PS ++ N S+WY+ + + L S
Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKS 68
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0D2U6K2|A0A0D2U6K2_GOSRA (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_008G205500 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 7.986e-84 Identity = 139/206 (67.48%), Postives = 145/206 (70.39%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT--------------------------------------------KLVPVGYGIKKL----------QVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDIT+YAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP ADSKAT ++ + +G KL Q+MMTIVDDLVSVDTLIEE LTVEPINEYVQSCDIVAFNKI
Sbjct: 49 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKATEERAAAVKASGKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 254
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A164UNT6|A0A164UNT6_DAUCS (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_026222 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.798e-70 Identity = 120/193 (62.18%), Postives = 135/193 (69.95%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT--------------------------------------KLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKICKY 155
MA+TF +L S G+KKLDEYLL+RSYISGYQASKDD+ ++AAL+ PSS YVNVSRWY HI+ALLRISGVS EGCGVTVEG AVATPP AD+KAT KLVPVGYGIKKLQ+MMTIVDDLVSVD L+E+ LT EP NEY+QSCDIVAFNKICK+
Sbjct: 360 MAITFYNLSSEDGIKKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHIEALLRISGVSAEGCGVTVEG----SAVATPPAADTKATGKSSVLLDIKPWDDETDMKKLEEAVRSVKLDGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKICKF 548
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A166EJJ1|A0A166EJJ1_DAUCS (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_007484 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 4.332e-66 Identity = 113/200 (56.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPPTADSK---------------------------------------------ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKIC 153
M VTF +L SAAGLKKLDEYLL+RSYISGYQASKDD+ ++AAL+ PSS YVN RW+ HI+ALLRISGVS +GCGVTV G AP +A+A AD A+KLVPVGYGIKKLQ+MMTIVDDLVSVD L+E+ LT EP NEY+QSCDIVAFNKIC
Sbjct: 1 MGVTFYNLSSAAGLKKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSEYVNALRWFHHIEALLRISGVSADGCGVTVSGSAPLVEDALANLSIADKTYVAKISFSAGKSSVLLDVKPWDDETDMKKLEEAVKSIKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKIC 200
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4L7V1|A0A6A4L7V1_9ERIC (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_16218 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 6.659e-65 Identity = 117/211 (55.45%), Postives = 133/211 (63.03%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPA--EAVATPPTADSKAT-KLVPVG----------------------------------------------YGIKKL----------QVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
MAVTF ++ S +GLKKLD+YLLTRSYI+GYQASKDDIT++ A+S PSS YVNVSRWY HI+ALLRISGVS EGCGVT+EG AP EAVATPP ADSKA+ +PV +G KL Q+M+TIVDDLVSVDTLIE+ LT EPINEYVQSCDIVAFNKI
Sbjct: 1 MAVTFFNVNSQSGLKKLDDYLLTRSYITGYQASKDDITVHTAISKPPSSEYVNVSRWYNHIEALLRISGVSAEGCGVTIEGCAPVFEEAVATPPAADSKASFASLPVATLFLALLFFLLSGKSSVLMDVKPWDDETDMKKLEEAVRSVQMEGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDTLIEDHLTAEPINEYVQSCDIVAFNKI 211
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q1A7P5|A0A9Q1A7P5_SALPP (RIPENING REGULATED PROTEIN DDTFR10-LIKE OS=Salix purpurea OX=77065 GN=OIU79_025697 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.014e-65 Identity = 110/187 (58.82%), Postives = 127/187 (67.91%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPPTADSK----------------------------------------------ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINE 139
MAVTF DL SAAGLKKLD++LL+RSYISGYQASKDD+T+Y+ALS APS+ YVNVSRWY HIDALLRISGV EGCGV V+G AP EA+ATPP+ ++K A+KLVPVGYGIKK+ +M+TIVDDLVSVDTLIEE+LTVEPINE
Sbjct: 1 MAVTFYDLTSAAGLKKLDDFLLSRSYISGYQASKDDLTVYSALSSAPSAEYVNVSRWYTHIDALLRISGVESEGCGVVVKGAAPITEEAIATPPSTETKAAEDDDDDDLGKSSVLMDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKMTIMLTIVDDLVSVDTLIEERLTVEPINE 187
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A843VGR0|A0A843VGR0_COLES (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_024189 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.621e-63 Identity = 118/215 (54.88%), Postives = 133/215 (61.86%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSK---ATKLVPVG--------------------------------------------YGIKKL----------QVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKICKYFRF 158
MAVTF D+ S AGLKKLDEYLLTRSYISGYQASKDDI ++AAL+ SS YVNVSRWYKHIDALLR+SGVS EG GVT+EG AP EA +PP AD+K +T +P+ +G KL Q+MMTIVDDLVSVDTLIEE LT EP NE++QSCDIVAFNKICKY F
Sbjct: 174 MAVTFYDVSSQAGLKKLDEYLLTRSYISGYQASKDDIVVHAALTSPLSSEYVNVSRWYKHIDALLRLSGVSAEGSGVTIEGSAPCEAPVSPPVADAKMKYSTIGIPLSSNNLHLLVSAGKSSVLLDVKPWDDETDMQKLEEAVRSIHMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTAEPANEHIQSCDIVAFNKICKYNCF 388
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D3V8Z4|A0A9D3V8Z4_9ROSI (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Gossypium stocksii OX=47602 GN=J1N35_027012 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 9.909e-63 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT 99
MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDIT+YAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP ADSKAT
Sbjct: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPAADSKAT 99 HSP 2 Score: 110.923 bits (276), Expect = 5.115e-27 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ+MMTIVDDLVSVDTLIEE LTVEPINEYVQSCDIVAFNKI
Sbjct: 176 ASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 230
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2P5XL57|A0A2P5XL57_GOSBA (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16583 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.916e-62 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT 99
MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDIT+YAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP ADSKAT
Sbjct: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPAADSKAT 99 HSP 2 Score: 125.561 bits (314), Expect = 1.112e-32 Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKICKYFRF 158
A+KLVPVGYGIKKLQ+MMTIVDDLVSVDTLIEE LT EPINEYVQSCDIVAFNKICKYFRF
Sbjct: 174 ASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTAEPINEYVQSCDIVAFNKICKYFRF 234
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2P5VST1|A0A2P5VST1_GOSBA (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA38844 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.115e-62 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT 99
MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDIT+YAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP ADSKAT
Sbjct: 12 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKAT 110 HSP 2 Score: 127.102 bits (318), Expect = 4.211e-33 Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKICKYFRF 158
A+KLVPVGYGIKKLQ+MMTIVDDLVSVDTLIEE LTVEPINEYVQSCDIVAFNKICKYFRF
Sbjct: 186 ASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKICKYFRF 246
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J9A4F4|A0A7J9A4F4_9ROSI (Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_006157 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.154e-62 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT 99
MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDIT+YAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP ADSKAT
Sbjct: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPAADSKAT 99 HSP 2 Score: 88.9669 bits (219), Expect = 1.565e-18 Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQ 142
A+KLVPVGYGIKKLQ+MMTIVDDLVSVDTLIEE LTVEPINEYVQ
Sbjct: 176 ASKLVPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQ 220
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P93447|EF1D_SPUBR (Elongation factor 1-delta OS=Spuriopimpinella brachycarpa OX=45043 PE=2 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 2.315e-45 Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKAT 99
MAVTF DL S AGL+KLDEYLL+RSYISGYQASKDD+ ++AAL+ PSS YVNVSRWY H++ALLRISGVS EGCGVTVEG +VATPP AD+KA+
Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEG----SSVATPPVADTKAS 95 HSP 2 Score: 96.2857 bits (238), Expect = 4.373e-24 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLV VGYGIKKLQ+M+TIVDDLVSVD L+E+ LT EP NEY+QSCDIVAFNKI
Sbjct: 172 ASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SI20|EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.145e-42 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0
Query: 5 FNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPPTADSKAT 99
F +L S +GLKKLDE+LLTRSYI+GYQASKDDIT++ ALS P+S +VNVSRW+ HIDALLRISGVS EG GV VEG +P EAVATPP ADSK T
Sbjct: 4 FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDT 100 HSP 2 Score: 106.301 bits (264), Expect = 8.726e-28 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +M TIVDDLVS+DT+IEEQLTVEPINEYVQSCDIVAFNKI
Sbjct: 177 ASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O81918|EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 5.884e-42 Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPP 92
MAVTF+DL S AGL LD YLL+RSYI+GYQASKDD+T+++A+ A +SYVNVSRWYKHIDALLRISGVS EG GVTVEG APA VATPP
Sbjct: 1 MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPP 92 HSP 2 Score: 102.834 bits (255), Expect = 1.469e-26 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +MMTIVDDLVSVD LIE+ LTVEPINEYVQSCDIVAFNKI
Sbjct: 177 ASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P48006|EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.391e-40 Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 0
Query: 5 FNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAP--AEAVATPP 92
F +L S AGLKKLDE+LLTRSYI+GYQASKDDIT++AAL+ P+S YVN SRWY HIDALLRISGVS EG GV VEG AP EAVATPP
Sbjct: 4 FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPP 93 HSP 2 Score: 106.301 bits (264), Expect = 9.206e-28 Identity = 49/55 (89.09%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ++ TIVDDLVS+DT+IEEQLTVEPINEYVQSCDIVAFNKI
Sbjct: 177 ASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q40682|EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 9.435e-36 Identity = 62/98 (63.27%), Postives = 77/98 (78.57%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKA 98
MA+T +++ S AGL+KLDEYLLTRSYISGYQASKDD+T++ +L AP++SYVNV+RWY HI ALLR SGV+ EG GV VE + A + PTAD KA
Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVE----STACSVSPTADQKA 94 HSP 2 Score: 96.6709 bits (239), Expect = 3.459e-24 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ+MMTIVDDLVSVD+LIE+ EP NE++QSCDIVAFNKI
Sbjct: 172 ASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q40680|EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 3.803e-35 Identity = 61/91 (67.03%), Postives = 73/91 (80.22%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATP 91
MAV+F ++ S AGLKKLDEYLLTRSYISGYQAS DD+ +Y+A S APSSSY NV+RW+ HIDALLR+SGV+ +G GV VE A A +TP
Sbjct: 1 MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSA-STP 90 HSP 2 Score: 98.5969 bits (244), Expect = 7.617e-25 Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ+MMTIVDDLVSVD+LIE+ EP NEY+QSCDIVAFNKI
Sbjct: 175 ASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29545|EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 6.896e-27 Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKLQ+M+TIVDDLVSVD+LIEE LT EPINE+VQSCDIVAFNKI
Sbjct: 170 ASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224 HSP 2 Score: 68.5514 bits (166), Expect = 1.708e-13 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALL--RISGVSEEGCGVTVEG 81
MAVTF DL +A GLK L+++L ++Y+SG SKDDI ++AA+ P + + N +RWY + A L R G + GV + G
Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPG---KAVGVNLPG 80
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84WM9|EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana OX=3702 GN=At5g12110 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.511e-24 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +MMTIVDDLVSVD LIE+ LT EP NEY+QS DIVAFNKI
Sbjct: 174 ASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228 HSP 2 Score: 66.6254 bits (161), Expect = 8.044e-13 Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRISGVSEEGCGVTVEGFAPAEAVATPPTADSKA 98
MAVTF+DL + GLK L+E+L ++YISG Q S DD+ +YAA+ P + N S+WY + + L S + GV V G + A P T + A
Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKS-FPGKADGVRVGGGVAPPSEAHPHTEEPAA 97
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SCX3|EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana OX=3702 GN=At5g19510 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.038e-22 Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KLVPVGYGIKKL +M TIVDDLVS D LIE+ LT EP NEY+QSCDIVAFNKI
Sbjct: 170 ASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224 HSP 2 Score: 65.855 bits (159), Expect = 1.685e-12 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDALLRIS 68
MAVTF+DL + G+K ++E+L ++YISG Q S DD+ +YAA+ PS ++ N S+WY+ + + L S
Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKS 68
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29546|EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 6.731e-20 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0
Query: 98 ATKLVPVGYGIKKLQVMMTIVDDLVSVDTLIEEQLTVEPINEYVQSCDIVAFNKI 152
A+KL+PVGYGIKKLQ+M+TI+DDL S T IEE L PINEYVQSCDIVAFNKI
Sbjct: 164 ASKLMPVGYGIKKLQIMLTIIDDLAS--TPIEEVLCEAPINEYVQSCDIVAFNKI 216 HSP 2 Score: 64.6994 bits (156), Expect = 3.942e-12 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 1 MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITIYAALSGAPSSSYVNVSRWYKHIDA 63
MAVTF+DL +A GLK L+ +L ++YISG +KDD+ ++AA+ PS+ + N +RWY + A
Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAA 63 The following BLAST results are available for this feature:
BLAST of Kocoo.012G090500.1 vs. Araport11
Analysis Date: 2024-05-24 (BLASTP of ISU v1.0 Kokia cookei 'WAI 16c69' proteins vs arabidopsis Araport11) Total hits: 5
BLAST of Kocoo.012G090500.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-05-24 (BLASTP of ISU v1.0 Kokia cookei 'WAI 16c69' proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Kocoo.012G090500.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-06-04 (BLASTP of ISU v1.0 Kokia cookei 'WAI 16c69' proteins vs UniProt Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ISU v1.0 Kokia cookei 'WAI 16c69' proteins
Date Performed: 2024-05-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Kocoo.012G090500.1_ISU_Kocoo_v1 ID=Kocoo.012G090500.1_ISU_Kocoo_v1; Name=Kocoo.012G090500.1; organism=Kokia cookei; type=mRNA; length=477bpback to top protein sequence of Kocoo.012G090500.1_ISU_Kocoo_v1 >Kocoo.012G090500.1_ISU_Kocoo_v1 ID=Kocoo.012G090500.1_ISU_Kocoo_v1; Name=Kocoo.012G090500.1_ISU_Kocoo_v1; organism=Kokia cookei; type=polypeptide; length=158bpback to top mRNA from alignment at Kc_12:5932692..5933950- Legend: polypeptideexonCDSstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>Kocoo.012G090500.1_ISU_Kocoo_v1 ID=Kocoo.012G090500.1_ISU_Kocoo_v1; Name=Kocoo.012G090500.1; organism=Kokia cookei; type=mRNA; length=1259bp; location=Sequence derived from: Kc_12:5932692..5933950- (Kokia cookeiback to top Coding sequence (CDS) from alignment at Kc_12:5932692..5933950- >Kocoo.012G090500.1_ISU_Kocoo_v1 ID=Kocoo.012G090500.1_ISU_Kocoo_v1; Name=Kocoo.012G090500.1; organism=Kokia cookei; type=CDS; length=477bp; location=Sequence derived from: Kc_12:5932692..5933950- (Kokia cookeiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|